RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 ARRDC4Q8NCT1 418 aa28■■■□□ 2.07
PLOD3-215ENST00000487563 ZNFX1Q9P2E3 1918 aaKnown RBP27.99■■■□□ 2.07
PLOD3-215ENST00000487563 FOXP2O15409 715 aa27.99■■■□□ 2.07
PLOD3-215ENST00000487563 MYCNP04198 464 aaPredicted RBP27.99■■■□□ 2.07
PLOD3-215ENST00000487563 VPS53Q5VIR6 699 aa27.99■■■□□ 2.07
PLOD3-215ENST00000487563 KBTBD13C9JR72 458 aa27.98■■■□□ 2.07
PLOD3-215ENST00000487563 BMP3P12645 472 aa27.98■■■□□ 2.07
PLOD3-215ENST00000487563 GJC2Q5T442 439 aaPredicted RBP27.98■■■□□ 2.07
PLOD3-215ENST00000487563 STX8Q9UNK0 236 aa27.98■■■□□ 2.07
PLOD3-215ENST00000487563 DIS3Q9Y2L1 958 aaKnown RBP27.98■■■□□ 2.07
PLOD3-215ENST00000487563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.98■■■□□ 2.07
PLOD3-215ENST00000487563 IKQ13123 557 aaPredicted RBP27.97■■■□□ 2.07
PLOD3-215ENST00000487563 ZNF792Q3KQV3 632 aa27.97■■■□□ 2.07
PLOD3-215ENST00000487563 SMC5Q8IY18 1101 aa27.97■■■□□ 2.07
PLOD3-215ENST00000487563 RILPL2Q969X0 211 aa27.97■■■□□ 2.07
PLOD3-215ENST00000487563 DDX11Q96FC9 970 aa27.97■■■□□ 2.07
PLOD3-215ENST00000487563 FAM227BQ96M60 508 aa27.97■■■□□ 2.07
PLOD3-215ENST00000487563 TINF2Q9BSI4 451 aa27.97■■■□□ 2.07
PLOD3-215ENST00000487563 RAVER2Q9HCJ3 691 aaKnown RBP27.97■■■□□ 2.07
PLOD3-215ENST00000487563 NRBP1Q9UHY1 535 aa27.97■■■□□ 2.07
PLOD3-215ENST00000487563 PLXNA1Q9UIW2 1896 aa27.96■■■□□ 2.07
PLOD3-215ENST00000487563 A0A0D9SFI3 127 aa27.96■■■□□ 2.07
PLOD3-215ENST00000487563 RANBP6O60518 1105 aaKnown RBP27.96■■■□□ 2.07
PLOD3-215ENST00000487563 MCMDC2Q4G0Z9 681 aa27.96■■■□□ 2.07
PLOD3-215ENST00000487563 GDF15Q99988 308 aa27.96■■■□□ 2.07
PLOD3-215ENST00000487563 SLC38A10Q9HBR0 1119 aa27.96■■■□□ 2.07
PLOD3-215ENST00000487563 TOMM22Q9NS69 142 aa27.96■■■□□ 2.07
PLOD3-215ENST00000487563 ATP2A1O14983 1001 aa27.95■■■□□ 2.06
PLOD3-215ENST00000487563 ATN1P54259 1190 aaPredicted RBP27.95■■■□□ 2.06
PLOD3-215ENST00000487563 TICAM2Q86XR7 235 aa27.95■■■□□ 2.06
PLOD3-215ENST00000487563 CHMP4CQ96CF2 233 aa27.95■■■□□ 2.06
PLOD3-215ENST00000487563 ANAPC4Q9UJX5 808 aa27.95■■■□□ 2.06
PLOD3-215ENST00000487563 RIPK3Q9Y572 518 aa27.95■■■□□ 2.06
PLOD3-215ENST00000487563 RANBP2P49792 3224 aaKnown RBP27.94■■■□□ 2.06
PLOD3-215ENST00000487563 TMEM232C9JQI7 657 aa27.94■■■□□ 2.06
PLOD3-215ENST00000487563 SLC1A4P43007 532 aa27.94■■■□□ 2.06
PLOD3-215ENST00000487563 MAGEA10P43363 369 aaPredicted RBP27.94■■■□□ 2.06
PLOD3-215ENST00000487563 STAT2P52630 851 aa27.94■■■□□ 2.06
PLOD3-215ENST00000487563 NMIQ13287 307 aaPredicted RBP27.94■■■□□ 2.06
PLOD3-215ENST00000487563 ALX1Q15699 326 aa27.94■■■□□ 2.06
PLOD3-215ENST00000487563 CHD1LQ86WJ1 897 aa27.94■■■□□ 2.06
PLOD3-215ENST00000487563 EXOC6Q8TAG9 804 aa27.94■■■□□ 2.06
PLOD3-215ENST00000487563 INCENPQ9NQS7 918 aa27.94■■■□□ 2.06
PLOD3-215ENST00000487563 CNPY2Q9Y2B0 182 aa27.94■■■□□ 2.06
PLOD3-215ENST00000487563 RARBP10826 455 aa27.93■■■□□ 2.06
PLOD3-215ENST00000487563 BMP8BP34820 402 aa27.93■■■□□ 2.06
PLOD3-215ENST00000487563 FAM160B2Q86V87 743 aa27.93■■■□□ 2.06
PLOD3-215ENST00000487563 CHURC1Q8WUH1 139 aa27.93■■■□□ 2.06
PLOD3-215ENST00000487563 GMCL1Q96IK5 515 aa27.93■■■□□ 2.06
PLOD3-215ENST00000487563 FBXO40Q9UH90 709 aa27.93■■■□□ 2.06
PLOD3-215ENST00000487563 FDX1P10109 184 aa27.92■■■□□ 2.06
PLOD3-215ENST00000487563 MCCP23508 829 aa27.92■■■□□ 2.06
PLOD3-215ENST00000487563 OAZ1P54368 228 aa27.92■■■□□ 2.06
PLOD3-215ENST00000487563 ANKRD35Q8N283 1001 aa27.92■■■□□ 2.06
PLOD3-215ENST00000487563 ORC4O43929 436 aa27.91■■■□□ 2.06
PLOD3-215ENST00000487563 NMT2O60551 498 aa27.91■■■□□ 2.06
PLOD3-215ENST00000487563 RRP12Q5JTH9 1297 aaKnown RBP27.91■■■□□ 2.06
PLOD3-215ENST00000487563 CHST13Q8NET6 341 aa27.91■■■□□ 2.06
PLOD3-215ENST00000487563 UBE2OQ9C0C9 1292 aaKnown RBP27.91■■■□□ 2.06
PLOD3-215ENST00000487563 XPNPEP3Q9NQH7 507 aa27.91■■■□□ 2.06
PLOD3-215ENST00000487563 MTMR7Q9Y216 660 aa27.91■■■□□ 2.06
PLOD3-215ENST00000487563 CCDC171Q6TFL3 1326 aa27.91■■■□□ 2.06
PLOD3-215ENST00000487563 IGHDP01880 384 aa27.9■■■□□ 2.06
PLOD3-215ENST00000487563 FGAP02671 866 aa27.9■■■□□ 2.06
PLOD3-215ENST00000487563 RTP1P59025 263 aa27.9■■■□□ 2.06
PLOD3-215ENST00000487563 NUCB1Q02818 461 aa27.9■■■□□ 2.06
PLOD3-215ENST00000487563 LRRC41Q15345 812 aa27.9■■■□□ 2.06
PLOD3-215ENST00000487563 ZNF589Q86UQ0 364 aaPredicted RBP27.9■■■□□ 2.06
PLOD3-215ENST00000487563 MSL3Q8N5Y2 521 aaKnown RBP27.9■■■□□ 2.06
PLOD3-215ENST00000487563 STAG1Q8WVM7 1258 aa27.9■■■□□ 2.06
PLOD3-215ENST00000487563 IL17RBQ9NRM6 502 aa27.9■■■□□ 2.06
PLOD3-215ENST00000487563 HOMER2Q9NSB8 354 aa27.9■■■□□ 2.06
PLOD3-215ENST00000487563 PRKAG2Q9UGJ0 569 aa27.9■■■□□ 2.06
PLOD3-215ENST00000487563 HSPD1P10809 573 aaKnown RBP27.89■■■□□ 2.06
PLOD3-215ENST00000487563 AKR1A1P14550 325 aa27.89■■■□□ 2.06
PLOD3-215ENST00000487563 TAL1P17542 331 aaPredicted RBP27.89■■■□□ 2.06
PLOD3-215ENST00000487563 MFAP1P55081 439 aaKnown RBP27.89■■■□□ 2.06
PLOD3-215ENST00000487563 KCTD1Q719H9 257 aa27.89■■■□□ 2.06
PLOD3-215ENST00000487563 ATP11BQ9Y2G3 1177 aa27.89■■■□□ 2.06
PLOD3-215ENST00000487563 DNAJC25-GNG10A0A024R161 153 aa27.88■■■□□ 2.05
PLOD3-215ENST00000487563 ADCYAP1R1P41586 468 aa27.88■■■□□ 2.05
PLOD3-215ENST00000487563 CCDC96Q2M329 555 aa27.88■■■□□ 2.05
PLOD3-215ENST00000487563 PLEKHM2Q8IWE5 1019 aa27.88■■■□□ 2.05
PLOD3-215ENST00000487563 LBHD1Q9BQE6 289 aaPredicted RBP27.88■■■□□ 2.05
PLOD3-215ENST00000487563 TACC3Q9Y6A5 838 aa27.88■■■□□ 2.05
PLOD3-215ENST00000487563 ZMYM6O95789 1325 aa27.88■■■□□ 2.05
PLOD3-215ENST00000487563 SYNGAP1Q96PV0 1343 aa27.88■■■□□ 2.05
PLOD3-215ENST00000487563 ZNF865P0CJ78 1059 aaPredicted RBP27.87■■■□□ 2.05
PLOD3-215ENST00000487563 HAND2P61296 217 aa27.87■■■□□ 2.05
PLOD3-215ENST00000487563 MDM2Q00987 491 aaPredicted RBP27.87■■■□□ 2.05
PLOD3-215ENST00000487563 RCSD1Q6JBY9 416 aa27.87■■■□□ 2.05
PLOD3-215ENST00000487563 RNF180Q86T96 592 aa27.87■■■□□ 2.05
PLOD3-215ENST00000487563 FERMT2Q96AC1 680 aa27.87■■■□□ 2.05
PLOD3-215ENST00000487563 ACAD9Q9H845 621 aa27.87■■■□□ 2.05
PLOD3-215ENST00000487563 ZHX1Q9UKY1 873 aaPredicted RBP27.87■■■□□ 2.05
PLOD3-215ENST00000487563 SDSP20132 328 aa27.86■■■□□ 2.05
PLOD3-215ENST00000487563 SLC39A5Q6ZMH5 540 aa27.86■■■□□ 2.05
PLOD3-215ENST00000487563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.86■■■□□ 2.05
PLOD3-215ENST00000487563 ZNF467Q7Z7K2 595 aaPredicted RBP27.86■■■□□ 2.05
PLOD3-215ENST00000487563 TDHQ8IZJ6 230 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms