RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 OTUD6AQ7L8S5 288 aa21.6■■□□□ 1.05
CCM2-214ENST00000481194 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.6■■□□□ 1.05
CCM2-214ENST00000481194 DEFB132Q7Z7B7 95 aa21.6■■□□□ 1.05
CCM2-214ENST00000481194 LRRC37A3O60309 1634 aa21.6■■□□□ 1.05
CCM2-214ENST00000481194 FDX1P10109 184 aa21.6■■□□□ 1.05
CCM2-214ENST00000481194 KIF4BQ2VIQ3 1234 aa21.6■■□□□ 1.05
CCM2-214ENST00000481194 GADD45BO75293 160 aaPredicted RBP21.59■■□□□ 1.05
CCM2-214ENST00000481194 ORC2Q13416 577 aaPredicted RBP21.59■■□□□ 1.05
CCM2-214ENST00000481194 MIER3Q7Z3K6 550 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 PKD2L1Q9P0L9 805 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 PCDHA12Q9UN75 941 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 USP17L5A8MUK1 530 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 AP3B2Q13367 1082 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 CDC37Q16543 378 aaPredicted RBP21.59■■□□□ 1.05
CCM2-214ENST00000481194 USP17L2Q6R6M4 530 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 IL1R1P14778 569 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 CETN2P41208 172 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 PTPN14Q15678 1187 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 TBC1D10BQ4KMP7 808 aaPredicted RBP21.59■■□□□ 1.05
CCM2-214ENST00000481194 ALS2Q96Q42 1657 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 DLG5Q8TDM6 1919 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 RESTQ13127 1097 aa21.59■■□□□ 1.05
CCM2-214ENST00000481194 PFKFB3Q16875 520 aaPredicted RBP21.59■■□□□ 1.05
CCM2-214ENST00000481194 EHBP1Q8NDI1 1231 aa21.58■■□□□ 1.05
CCM2-214ENST00000481194 TIGD1Q96MW7 591 aa21.58■■□□□ 1.05
CCM2-214ENST00000481194 MYCNP04198 464 aaPredicted RBP21.58■■□□□ 1.05
CCM2-214ENST00000481194 PRR16Q569H4 304 aa21.58■■□□□ 1.05
CCM2-214ENST00000481194 PCDHA7Q9UN72 937 aa21.58■■□□□ 1.05
CCM2-214ENST00000481194 PAK1Q13153 545 aa21.58■■□□□ 1.04
CCM2-214ENST00000481194 PAGR1Q9BTK6 254 aa21.58■■□□□ 1.04
CCM2-214ENST00000481194 PLA2G4DQ86XP0 818 aa21.58■■□□□ 1.04
CCM2-214ENST00000481194 ANKRD35Q8N283 1001 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 CPLX3Q8WVH0 158 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 GINM1Q9NU53 330 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 EPB41P11171 864 aaKnown RBP21.57■■□□□ 1.04
CCM2-214ENST00000481194 C16orf86Q6ZW13 317 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 ADD3Q9UEY8 706 aaKnown RBP21.57■■□□□ 1.04
CCM2-214ENST00000481194 PNMA3Q9UL41 463 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 FRMD4BQ9Y2L6 1034 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 TRIM14Q14142 442 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 C15orf52Q6ZUT6 534 aaKnown RBP21.57■■□□□ 1.04
CCM2-214ENST00000481194 MIGA2Q7L4E1 593 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 CDAN1Q8IWY9 1227 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 SPICE1Q8N0Z3 855 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 RUFY1Q96T51 708 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 RCOR1Q9UKL0 485 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 SYNRGQ9UMZ2 1314 aa21.57■■□□□ 1.04
CCM2-214ENST00000481194 CYLC1P35663 651 aaPredicted RBP21.56■■□□□ 1.04
CCM2-214ENST00000481194 CACNB3P54284 484 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 PTGDRQ13258 359 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 CEP95Q96GE4 821 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 CDHR1Q96JP9 859 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 CTNND2Q9UQB3 1225 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 ZBTB5O15062 677 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 HS1BP3Q53T59 392 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 CLIC4Q9Y696 253 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 CDC42EP5Q6NZY7 148 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 IWS1Q96ST2 819 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 IMPG2Q9BZV3 1241 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 TRPM3Q9HCF6 1732 aaPredicted RBP21.56■■□□□ 1.04
CCM2-214ENST00000481194 IFI16Q16666 785 aaKnown RBP21.56■■□□□ 1.04
CCM2-214ENST00000481194 POLLQ9UGP5 575 aa21.56■■□□□ 1.04
CCM2-214ENST00000481194 FKBP1AP62942 108 aaKnown RBP21.55■■□□□ 1.04
CCM2-214ENST00000481194 SERTAD1Q9UHV2 236 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 ATRNO75882 1429 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 KCTD2Q14681 263 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 FAM151AQ8WW52 585 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 ALS2CR12Q96Q35 445 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 SPAG5Q96R06 1193 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 MAP3K14Q99558 947 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 GTPBP6O43824 516 aaPredicted RBP21.55■■□□□ 1.04
CCM2-214ENST00000481194 TUBB4AP04350 444 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 KCNB2Q92953 911 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 CACNA1FO60840 1977 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 SP4Q02446 784 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 SPECC1Q5M775 1068 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 ARL6IP4Q66PJ3 421 aaKnown RBP21.55■■□□□ 1.04
CCM2-214ENST00000481194 KRBA2Q6ZNG9 492 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 WDR11Q9BZH6 1224 aa21.55■■□□□ 1.04
CCM2-214ENST00000481194 RGPD1P0DJD0 1748 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 PLEKHA8P1O95397 391 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 MYL1P05976 194 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 CDR1P51861 262 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 PKP1Q13835 747 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 NCAPG2Q86XI2 1143 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 KIF22Q14807 665 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 SLF1Q9BQI6 1058 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 ZNF70Q9UC06 446 aaPredicted RBP21.54■■□□□ 1.04
CCM2-214ENST00000481194 H0YCG3 227 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 STOX1Q6ZVD7 989 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 MICALL2Q8IY33 904 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 PSMD14O00487 310 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 ERLIN2O94905 339 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 SLC16A2P36021 539 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 TMEM87AQ8NBN3 555 aa21.54■■□□□ 1.04
CCM2-214ENST00000481194 RGS22Q8NE09 1264 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 ABCB11O95342 1321 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 TECP42680 631 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 STRN3Q13033 797 aa21.53■■□□□ 1.04
CCM2-214ENST00000481194 KIF18AQ8NI77 898 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms