RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ASPNQ9BXN1 380 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 MKNK2Q9HBH9 465 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 RNF112Q9ULX5 631 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 CNTNAP4Q9C0A0 1308 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 VWDEQ8N2E2 1590 aa7.71□□□□□ -1.18
CCDC171-207ENST00000478913 BLMP54132 1417 aaPredicted RBP7.7□□□□□ -1.18
CCDC171-207ENST00000478913 FHOD3Q2V2M9 1422 aa7.7□□□□□ -1.18
CCDC171-207ENST00000478913 C3P01024 1663 aa7.7□□□□□ -1.18
CCDC171-207ENST00000478913 PRR33A8MZF0 331 aa7.7□□□□□ -1.18
CCDC171-207ENST00000478913 CEACAM5P06731 702 aa7.7□□□□□ -1.18
CCDC171-207ENST00000478913 ZNF865P0CJ78 1059 aaPredicted RBP7.7□□□□□ -1.18
CCDC171-207ENST00000478913 C22orf34Q6ZV56 151 aa7.7□□□□□ -1.18
CCDC171-207ENST00000478913 ANKS3Q6ZW76 656 aa7.7□□□□□ -1.18
CCDC171-207ENST00000478913 DHX38Q92620 1227 aaKnown RBP7.7□□□□□ -1.18
CCDC171-207ENST00000478913 ZNF512BQ96KM6 892 aaPredicted RBP7.7□□□□□ -1.18
CCDC171-207ENST00000478913 MKRN2Q9H000 416 aaKnown RBP7.7□□□□□ -1.18
CCDC171-207ENST00000478913 PHAXQ9H814 394 aaKnown RBP7.7□□□□□ -1.18
CCDC171-207ENST00000478913 SUCOQ9UBS9 1254 aaKnown RBP7.7□□□□□ -1.18
CCDC171-207ENST00000478913 U3KQE9 123 aa7.7□□□□□ -1.18
CCDC171-207ENST00000478913 FAM155AB1AL88 458 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-207ENST00000478913 HYAL3O43820 417 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-207ENST00000478913 HOXA10P31260 410 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-207ENST00000478913 INTS5Q6P9B9 1019 aaKnown RBP7.69□□□□□ -1.18
CCDC171-207ENST00000478913 CKAP2LQ8IYA6 745 aa7.69□□□□□ -1.18
CCDC171-207ENST00000478913 PLD6Q8N2A8 252 aaKnown RBP7.69□□□□□ -1.18
CCDC171-207ENST00000478913 HNRNPLLQ8WVV9 542 aaKnown RBP7.69□□□□□ -1.18
CCDC171-207ENST00000478913 FBXL18Q96ME1 805 aa7.69□□□□□ -1.18
CCDC171-207ENST00000478913 HIRIP3Q9BW71 556 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-207ENST00000478913 TNKS2Q9H2K2 1166 aa7.69□□□□□ -1.18
CCDC171-207ENST00000478913 ZC3H7BQ9UGR2 993 aaKnown RBP7.69□□□□□ -1.18
CCDC171-207ENST00000478913 KCNH3Q9ULD8 1083 aa7.69□□□□□ -1.18
CCDC171-207ENST00000478913 LTBP3Q9NS15 1303 aa7.69□□□□□ -1.18
CCDC171-207ENST00000478913 TNS2Q63HR2 1409 aa7.69□□□□□ -1.18
CCDC171-207ENST00000478913 ATP10AO60312 1499 aa7.68□□□□□ -1.18
CCDC171-207ENST00000478913 UTRNP46939 3433 aa7.68□□□□□ -1.18
CCDC171-207ENST00000478913 EFCAB5A4FU69 1503 aa7.68□□□□□ -1.18
CCDC171-207ENST00000478913 COBLO75128 1261 aa7.68□□□□□ -1.18
CCDC171-207ENST00000478913 PMS1P54277 932 aaKnown RBP7.68□□□□□ -1.18
CCDC171-207ENST00000478913 BBS9Q3SYG4 887 aa7.68□□□□□ -1.18
CCDC171-207ENST00000478913 NBPF12Q5TAG4 269 aaPredicted RBP7.68□□□□□ -1.18
CCDC171-207ENST00000478913 LARP1BQ659C4 914 aaKnown RBP7.68□□□□□ -1.18
CCDC171-207ENST00000478913 DNAJC5GQ8N7S2 189 aa7.68□□□□□ -1.18
CCDC171-207ENST00000478913 NETO1Q8TDF5 533 aa7.68□□□□□ -1.18
CCDC171-207ENST00000478913 SMARCC1Q92922 1105 aaPredicted RBP7.68□□□□□ -1.18
CCDC171-207ENST00000478913 CAPN6Q9Y6Q1 641 aa7.68□□□□□ -1.18
CCDC171-207ENST00000478913 RTEL1-TNFRSF6BF6WH68 1400 aa7.68□□□□□ -1.18
CCDC171-207ENST00000478913 LRRN2O75325 713 aa7.67□□□□□ -1.18
CCDC171-207ENST00000478913 TNK2Q07912 1038 aa7.67□□□□□ -1.18
CCDC171-207ENST00000478913 LRP8Q14114 963 aa7.67□□□□□ -1.18
CCDC171-207ENST00000478913 IFI16Q16666 785 aaKnown RBP7.67□□□□□ -1.18
CCDC171-207ENST00000478913 TDRD10Q5VZ19 366 aaKnown RBP7.67□□□□□ -1.18
CCDC171-207ENST00000478913 ANKLE2Q86XL3 938 aa7.67□□□□□ -1.18
CCDC171-207ENST00000478913 CCDC144CPQ8IYA2 1237 aa7.67□□□□□ -1.18
CCDC171-207ENST00000478913 DTWD2Q8NBA8 298 aa7.67□□□□□ -1.18
CCDC171-207ENST00000478913 VWCEQ96DN2 955 aa7.67□□□□□ -1.18
CCDC171-207ENST00000478913 Q96M66 194 aa7.67□□□□□ -1.18
CCDC171-207ENST00000478913 KRTAP4-9Q9BYQ8 210 aa7.67□□□□□ -1.18
CCDC171-207ENST00000478913 TRIM55Q9BYV6 548 aa7.67□□□□□ -1.18
CCDC171-207ENST00000478913 ZNF214Q9UL59 606 aaPredicted RBP7.67□□□□□ -1.18
CCDC171-207ENST00000478913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.67□□□□□ -1.18
CCDC171-207ENST00000478913 C9orf84Q5VXU9 1444 aa7.67□□□□□ -1.18
CCDC171-207ENST00000478913 CLCN7P51798 805 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 NKPD1Q17RQ9 610 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 MSMPQ1L6U9 139 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 GNPTABQ3T906 1256 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 CDKAL1Q5VV42 579 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 VHLLQ6RSH7 139 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 PPFIBP1Q86W92 1011 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 SPACA3Q8IXA5 215 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 PIWIL2Q8TC59 973 aaKnown RBP7.66□□□□□ -1.18
CCDC171-207ENST00000478913 UBXN4Q92575 508 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 FAM86C1Q9NVL1 165 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 PCDHB10Q9UN67 800 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 PLAGL2Q9UPG8 496 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 CAMTA1Q9Y6Y1 1673 aa7.66□□□□□ -1.18
CCDC171-207ENST00000478913 TMEM265A0A087WTH1 108 aa7.65□□□□□ -1.18
CCDC171-207ENST00000478913 C9IYK1 514 aa7.65□□□□□ -1.18
CCDC171-207ENST00000478913 RBAK-RBAKDNI3L0D1 243 aa7.65□□□□□ -1.18
CCDC171-207ENST00000478913 SSTR4P31391 388 aa7.65□□□□□ -1.18
CCDC171-207ENST00000478913 SLC7A5Q01650 507 aa7.65□□□□□ -1.18
CCDC171-207ENST00000478913 FXNQ16595 210 aa7.65□□□□□ -1.18
CCDC171-207ENST00000478913 DNAJC2Q99543 621 aaKnown RBP7.65□□□□□ -1.18
CCDC171-207ENST00000478913 ASCC2Q9H1I8 757 aaPredicted RBP7.65□□□□□ -1.18
CCDC171-207ENST00000478913 USP35Q9P2H5 1018 aa7.65□□□□□ -1.18
CCDC171-207ENST00000478913 ROBO1Q9Y6N7 1651 aa7.64□□□□□ -1.19
CCDC171-207ENST00000478913 NWD1Q149M9 1564 aa7.64□□□□□ -1.19
CCDC171-207ENST00000478913 CDK13Q14004 1512 aaKnown RBP7.64□□□□□ -1.19
CCDC171-207ENST00000478913 NINLQ9Y2I6 1382 aa7.64□□□□□ -1.19
CCDC171-207ENST00000478913 U2SURPO15042 1029 aaKnown RBP7.64□□□□□ -1.19
CCDC171-207ENST00000478913 KLF4O43474 513 aa7.64□□□□□ -1.19
CCDC171-207ENST00000478913 TP53P04637 393 aaPredicted RBP7.64□□□□□ -1.19
CCDC171-207ENST00000478913 NBPF9Q3BBW0 867 aa7.64□□□□□ -1.19
CCDC171-207ENST00000478913 HRASLS5Q96KN8 279 aa7.64□□□□□ -1.19
CCDC171-207ENST00000478913 FBXL21Q9UKT6 434 aa7.64□□□□□ -1.19
CCDC171-207ENST00000478913 PCDHB12Q9Y5F1 795 aa7.64□□□□□ -1.19
CCDC171-207ENST00000478913 SNX11Q9Y5W9 270 aa7.64□□□□□ -1.19
CCDC171-207ENST00000478913 ERICH3Q5RHP9 1530 aa7.63□□□□□ -1.19
CCDC171-207ENST00000478913 ARID1BQ8NFD5 2236 aaPredicted RBP7.63□□□□□ -1.19
CCDC171-207ENST00000478913 MAGI2Q86UL8 1455 aa7.63□□□□□ -1.19
CCDC171-207ENST00000478913 NPATQ14207 1427 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms