RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 UBXN2AP68543 259 aa11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 MTFR1Q15390 333 aa11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 MAP3K21Q5TCX8 1036 aa11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 BTNL9Q6UXG8 535 aa11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 FAM160B2Q86V87 743 aa11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 IQCA1Q86XH1 822 aa11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 DCAF4Q8WV16 495 aa11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 ZSCAN10Q96SZ4 725 aaPredicted RBP11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 TMEM106CQ9BVX2 250 aa11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 TEX13BQ9BXU2 312 aa11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 RLFQ13129 1914 aa11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 COL11A1P12107 1806 aaPredicted RBP11.72□□□□□ -0.53
SCAMP3-206ENST00000478737 B4E1Z4 1266 aa11.71□□□□□ -0.53
SCAMP3-206ENST00000478737 ZBED4O75132 1171 aa11.71□□□□□ -0.53
SCAMP3-206ENST00000478737 HMGCRP04035 888 aa11.71□□□□□ -0.53
SCAMP3-206ENST00000478737 INHAP05111 366 aa11.71□□□□□ -0.53
SCAMP3-206ENST00000478737 CYP2B6P20813 491 aa11.71□□□□□ -0.53
SCAMP3-206ENST00000478737 STAT2P52630 851 aa11.71□□□□□ -0.53
SCAMP3-206ENST00000478737 TRIB2Q92519 343 aa11.71□□□□□ -0.53
SCAMP3-206ENST00000478737 APBA2Q99767 749 aa11.71□□□□□ -0.53
SCAMP3-206ENST00000478737 PAK6Q9NQU5 681 aaPredicted RBP11.71□□□□□ -0.53
SCAMP3-206ENST00000478737 IVNS1ABPQ9Y6Y0 642 aa11.71□□□□□ -0.53
SCAMP3-206ENST00000478737 CENPFP49454 3210 aa11.71□□□□□ -0.54
SCAMP3-206ENST00000478737 DOCK3Q8IZD9 2030 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 MGAMO43451 1857 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 ZSWIM8A7E2V4 1837 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 A0A0G2JMZ2 1700 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 PDHBP11177 359 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 CCL5P13501 91 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 ADORA2AP29274 412 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 GJA8P48165 433 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 MLLT1Q03111 559 aaPredicted RBP11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 PLS1Q14651 629 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 NECTIN1Q15223 517 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 SEC23AQ15436 765 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 ENAHQ8N8S7 591 aaPredicted RBP11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 UNC93B1Q9H1C4 597 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 BIN2Q9UBW5 565 aaPredicted RBP11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 TAF6LQ9Y6J9 622 aa11.7□□□□□ -0.54
SCAMP3-206ENST00000478737 ZNF536O15090 1300 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 RPTORQ8N122 1335 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 E7EWF7 191 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 COBLO75128 1261 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 FCER1AP12319 257 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 EN2P19622 333 aaPredicted RBP11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 ZNF543Q08ER8 600 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 TRDNQ13061 729 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 BECN1Q14457 450 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 OLFML2BQ68BL8 750 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 STOX1Q6ZVD7 989 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 KCTD1Q719H9 257 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 NCAPG2Q86XI2 1143 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 ZKSCAN3Q9BRR0 538 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 MTA3Q9BTC8 594 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 RNF208Q9H0X6 261 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 PRR12Q9ULL5 1215 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 DIS3Q9Y2L1 958 aaKnown RBP11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 RIPK3Q9Y572 518 aa11.69□□□□□ -0.54
SCAMP3-206ENST00000478737 SGPL1O95470 568 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 ZKSCAN1P17029 563 aaPredicted RBP11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 CACNB2Q08289 660 aaPredicted RBP11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 TRIM32Q13049 653 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 KCTD2Q14681 263 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 CCL14Q16627 93 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 TSGA10IPQ3SY00 556 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 GPATCH4Q5T3I0 446 aaKnown RBP11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 WDR78Q5VTH9 848 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 RNF20Q5VTR2 975 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 CREB3L3Q68CJ9 461 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 SNRNP48Q6IEG0 339 aaKnown RBP11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 TTBK2Q6IQ55 1244 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 CYB5R4Q7L1T6 521 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 RASGRP2Q7LDG7 609 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 DPP9Q86TI2 863 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 PNMA1Q8ND90 353 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 CHST13Q8NET6 341 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 NCOA7Q8NI08 942 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 NPLOC4Q8TAT6 608 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 UBAC1Q9BSL1 405 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 CRISPLD2Q9H0B8 497 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 CWC22Q9HCG8 908 aaKnown RBP11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 RAVER2Q9HCJ3 691 aaKnown RBP11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 HMX1Q9NP08 348 aaPredicted RBP11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 SLC5A4Q9NY91 659 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 FLRT1Q9NZU1 646 aa11.68□□□□□ -0.54
SCAMP3-206ENST00000478737 RBBP6Q7Z6E9 1792 aaKnown RBP11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 TNKSO95271 1327 aa11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 DNAJC25-GNG10A0A024R161 153 aa11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 SLC27A2O14975 620 aa11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 MYCP01106 439 aaPredicted RBP11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 ZNF792Q3KQV3 632 aa11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 TKFCQ3LXA3 575 aa11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 UBE2Q1Q7Z7E8 422 aa11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 RALYLQ86SE5 291 aaKnown RBP11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 MB21D2Q8IYB1 491 aaPredicted RBP11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 CPXCR1Q8N123 301 aa11.67□□□□□ -0.54
SCAMP3-206ENST00000478737 IGDCC4Q8TDY8 1250 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 256.2 ms