RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 HLA-DOAP06340 250 aa17.44■□□□□ 0.38
USP11-207ENST00000478596 CHD1LQ86WJ1 897 aa17.44■□□□□ 0.38
USP11-207ENST00000478596 GLT1D1Q96MS3 346 aa17.44■□□□□ 0.38
USP11-207ENST00000478596 TINF2Q9BSI4 451 aa17.44■□□□□ 0.38
USP11-207ENST00000478596 CCDC8Q9H0W5 538 aaPredicted RBP17.44■□□□□ 0.38
USP11-207ENST00000478596 GPR108Q9NPR9 543 aa17.44■□□□□ 0.38
USP11-207ENST00000478596 AATFQ9NY61 560 aaKnown RBP eCLIP17.44■□□□□ 0.38
USP11-207ENST00000478596 SYNRGQ9UMZ2 1314 aa17.44■□□□□ 0.38
USP11-207ENST00000478596 FCER1AP12319 257 aa17.43■□□□□ 0.38
USP11-207ENST00000478596 TAL1P17542 331 aaPredicted RBP17.43■□□□□ 0.38
USP11-207ENST00000478596 RABGGTBP53611 331 aa17.43■□□□□ 0.38
USP11-207ENST00000478596 NUCB1Q02818 461 aa17.43■□□□□ 0.38
USP11-207ENST00000478596 RAB3GAP1Q15042 981 aa17.43■□□□□ 0.38
USP11-207ENST00000478596 KCNA10Q16322 511 aa17.43■□□□□ 0.38
USP11-207ENST00000478596 TTC39AQ5SRH9 613 aa17.43■□□□□ 0.38
USP11-207ENST00000478596 PI16Q6UXB8 463 aa17.43■□□□□ 0.38
USP11-207ENST00000478596 FAM126BQ8IXS8 530 aa17.43■□□□□ 0.38
USP11-207ENST00000478596 LENG1Q96BZ8 264 aaPredicted RBP17.43■□□□□ 0.38
USP11-207ENST00000478596 PPP1R12CQ9BZL4 782 aa17.43■□□□□ 0.38
USP11-207ENST00000478596 DIS3Q9Y2L1 958 aaKnown RBP17.43■□□□□ 0.38
USP11-207ENST00000478596 WDFY4Q6ZS81 3184 aa17.42■□□□□ 0.38
USP11-207ENST00000478596 PRRC2BQ5JSZ5 2229 aaKnown RBP17.42■□□□□ 0.38
USP11-207ENST00000478596 MYOGP15173 224 aa17.42■□□□□ 0.38
USP11-207ENST00000478596 CST5P28325 142 aaPredicted RBP17.42■□□□□ 0.38
USP11-207ENST00000478596 NCAPG2Q86XI2 1143 aa17.42■□□□□ 0.38
USP11-207ENST00000478596 FBXL18Q96ME1 805 aa17.42■□□□□ 0.38
USP11-207ENST00000478596 ARVCFO00192 962 aa17.41■□□□□ 0.38
USP11-207ENST00000478596 CYP2C18P33260 490 aa17.41■□□□□ 0.38
USP11-207ENST00000478596 CCDC158Q5M9N0 1113 aa17.41■□□□□ 0.38
USP11-207ENST00000478596 OTOP2Q7RTS6 562 aa17.41■□□□□ 0.38
USP11-207ENST00000478596 EAF2Q96CJ1 260 aaPredicted RBP17.41■□□□□ 0.38
USP11-207ENST00000478596 DBNDD2Q9BQY9 259 aa17.41■□□□□ 0.38
USP11-207ENST00000478596 TLR7Q9NYK1 1049 aaKnown RBP17.41■□□□□ 0.38
USP11-207ENST00000478596 LRP2BPQ9P2M1 347 aa17.41■□□□□ 0.38
USP11-207ENST00000478596 SLC4A7Q9Y6M7 1214 aa17.41■□□□□ 0.38
USP11-207ENST00000478596 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.41■□□□□ 0.38
USP11-207ENST00000478596 A0A0G2JMZ2 1700 aa17.41■□□□□ 0.38
USP11-207ENST00000478596 A0A0U1RQG5 324 aaPredicted RBP17.4■□□□□ 0.38
USP11-207ENST00000478596 RFXAPO00287 272 aa17.4■□□□□ 0.38
USP11-207ENST00000478596 TLR3O15455 904 aaKnown RBP17.4■□□□□ 0.38
USP11-207ENST00000478596 CD4P01730 458 aa17.4■□□□□ 0.38
USP11-207ENST00000478596 NAA16Q6N069 864 aaPredicted RBP17.4■□□□□ 0.38
USP11-207ENST00000478596 EHD4Q9H223 541 aa17.4■□□□□ 0.38
USP11-207ENST00000478596 SAP30BPQ9UHR5 308 aaKnown RBP17.4■□□□□ 0.38
USP11-207ENST00000478596 DBNLQ9UJU6 430 aaKnown RBP17.4■□□□□ 0.38
USP11-207ENST00000478596 CNPY2Q9Y2B0 182 aa17.4■□□□□ 0.38
USP11-207ENST00000478596 SMCHD1A6NHR9 2005 aa17.4■□□□□ 0.38
USP11-207ENST00000478596 ALADP13716 330 aa17.39■□□□□ 0.37
USP11-207ENST00000478596 MX1P20591 662 aa17.39■□□□□ 0.37
USP11-207ENST00000478596 ARID4AP29374 1257 aaPredicted RBP17.39■□□□□ 0.37
USP11-207ENST00000478596 PLS1Q14651 629 aa17.39■□□□□ 0.37
USP11-207ENST00000478596 ABCB5Q2M3G0 1257 aa17.39■□□□□ 0.37
USP11-207ENST00000478596 ZNF792Q3KQV3 632 aa17.39■□□□□ 0.37
USP11-207ENST00000478596 CERKLQ49MI3 558 aaPredicted RBP17.39■□□□□ 0.37
USP11-207ENST00000478596 PCSK9Q8NBP7 692 aaKnown RBP17.39■□□□□ 0.37
USP11-207ENST00000478596 UIMC1Q96RL1 719 aa17.39■□□□□ 0.37
USP11-207ENST00000478596 TANGO6Q9C0B7 1094 aa17.39■□□□□ 0.37
USP11-207ENST00000478596 GBF1Q92538 1859 aa17.38■□□□□ 0.37
USP11-207ENST00000478596 MYADML2A6NDP7 307 aa17.38■□□□□ 0.37
USP11-207ENST00000478596 DUSP11O75319 330 aaKnown RBP17.38■□□□□ 0.37
USP11-207ENST00000478596 SLC25A27O95847 323 aa17.38■□□□□ 0.37
USP11-207ENST00000478596 ASGR1P07306 291 aa17.38■□□□□ 0.37
USP11-207ENST00000478596 DSG3P32926 999 aa17.38■□□□□ 0.37
USP11-207ENST00000478596 KRT40Q6A162 431 aa17.38■□□□□ 0.37
USP11-207ENST00000478596 ADGRA1Q86SQ6 560 aa17.38■□□□□ 0.37
USP11-207ENST00000478596 MSL3Q8N5Y2 521 aaKnown RBP17.38■□□□□ 0.37
USP11-207ENST00000478596 CABP5Q9NP86 173 aa17.38■□□□□ 0.37
USP11-207ENST00000478596 SERPINB13Q9UIV8 391 aa17.38■□□□□ 0.37
USP11-207ENST00000478596 FAM184BQ9ULE4 1060 aa17.38■□□□□ 0.37
USP11-207ENST00000478596 EPOPA6NHQ4 379 aa17.37■□□□□ 0.37
USP11-207ENST00000478596 PGK2P07205 417 aa17.37■□□□□ 0.37
USP11-207ENST00000478596 CA3P07451 260 aa17.37■□□□□ 0.37
USP11-207ENST00000478596 UQCRFS1P1P0C7P4 283 aa17.37■□□□□ 0.37
USP11-207ENST00000478596 ATP2A2P16615 1042 aaKnown RBP17.37■□□□□ 0.37
USP11-207ENST00000478596 TMEM67Q5HYA8 995 aa17.37■□□□□ 0.37
USP11-207ENST00000478596 TSHZ3Q63HK5 1081 aa17.37■□□□□ 0.37
USP11-207ENST00000478596 GJD3Q8N144 294 aa17.37■□□□□ 0.37
USP11-207ENST00000478596 MMP19Q99542 508 aa17.37■□□□□ 0.37
USP11-207ENST00000478596 HIPK3Q9H422 1215 aa17.37■□□□□ 0.37
USP11-207ENST00000478596 MYH7P12883 1935 aa17.37■□□□□ 0.37
USP11-207ENST00000478596 GUCY1A2P33402 732 aa17.36■□□□□ 0.37
USP11-207ENST00000478596 MCAMP43121 646 aa17.36■□□□□ 0.37
USP11-207ENST00000478596 CSPP1Q1MSJ5 1256 aa17.36■□□□□ 0.37
USP11-207ENST00000478596 FAM178BQ8IXR5 827 aa17.36■□□□□ 0.37
USP11-207ENST00000478596 OTUD7AQ8TE49 926 aaPredicted RBP17.36■□□□□ 0.37
USP11-207ENST00000478596 VTI1AQ96AJ9 217 aa17.36■□□□□ 0.37
USP11-207ENST00000478596 ECHDC1Q9NTX5 307 aa17.36■□□□□ 0.37
USP11-207ENST00000478596 FOCADQ5VW36 1801 aa17.35■□□□□ 0.37
USP11-207ENST00000478596 USP34Q70CQ2 3546 aa17.35■□□□□ 0.37
USP11-207ENST00000478596 A0A1W2PRG0 241 aa17.35■□□□□ 0.37
USP11-207ENST00000478596 IGSF3O75054 1194 aa17.35■□□□□ 0.37
USP11-207ENST00000478596 C6orf222P0C671 652 aaPredicted RBP17.35■□□□□ 0.37
USP11-207ENST00000478596 FOXK2Q01167 660 aa17.35■□□□□ 0.37
USP11-207ENST00000478596 KCTD2Q14681 263 aa17.35■□□□□ 0.37
USP11-207ENST00000478596 RPUSD2Q8IZ73 545 aaKnown RBP17.35■□□□□ 0.37
USP11-207ENST00000478596 ATG4CQ96DT6 458 aa17.35■□□□□ 0.37
USP11-207ENST00000478596 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
USP11-207ENST00000478596 UPF3AQ9H1J1 476 aaKnown RBP17.35■□□□□ 0.37
USP11-207ENST00000478596 UMODL1Q5DID0 1318 aa17.35■□□□□ 0.37
USP11-207ENST00000478596 TTC41PQ6P2S7 1318 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms