RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	OLFML2B	Q68BL8	750 aa		12.05	□□□□□ -0.48
CCM2-208	ENST00000476594	IQCA1	Q86XH1	822 aa		12.05	□□□□□ -0.48
CCM2-208	ENST00000476594	STAG1	Q8WVM7	1258 aa		12.05	□□□□□ -0.48
CCM2-208	ENST00000476594	KIFC2	Q96AC6	838 aa		12.05	□□□□□ -0.48
CCM2-208	ENST00000476594	MMP19	Q99542	508 aa		12.05	□□□□□ -0.48
CCM2-208	ENST00000476594	TCP11L1	Q9NUJ3	509 aa		12.05	□□□□□ -0.48
CCM2-208	ENST00000476594	ATP2A1	O14983	1001 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	PLA2G6	O60733	806 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	TOP1	P11387	765 aa	Known RBP	12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	HAND2	P61296	217 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	MAP3K21	Q5TCX8	1036 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	SNRNP48	Q6IEG0	339 aa	Known RBP	12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	RCSD1	Q6JBY9	416 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	POTEE	Q6S8J3	1075 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	NECAB2	Q7Z6G3	386 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	DCAF4	Q8WV16	495 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	SHISA4	Q96DD7	197 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	TTC14	Q96N46	770 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	NUP88	Q99567	741 aa	Predicted RBP	12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	CNNM2	Q9H8M5	875 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	FBXO28	Q9NVF7	368 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	PNMA2	Q9UL42	364 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	BRCA2	P51587	3418 aa		12.04	□□□□□ -0.48
CCM2-208	ENST00000476594	PLXNB2	O15031	1838 aa		12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	TMEM232	C9JQI7	657 aa		12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	NEFL	P07196	543 aa		12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	CNGA1	P29973	690 aa		12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	CACNB2	Q08289	660 aa	Predicted RBP	12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	TRDN	Q13061	729 aa		12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	CCDC96	Q2M329	555 aa		12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	CENPQ	Q7L2Z9	268 aa	Predicted RBP	12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	DPF3	Q92784	378 aa		12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	DDX11	Q96FC9	970 aa		12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	KRT23	Q9C075	422 aa		12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	CRISPLD2	Q9H0B8	497 aa		12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	ZNF214	Q9UL59	606 aa	Predicted RBP	12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	DIS3	Q9Y2L1	958 aa	Known RBP	12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	NR2E3	Q9Y5X4	410 aa		12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	TNRC18	O15417	2968 aa	Predicted RBP	12.03	□□□□□ -0.48
CCM2-208	ENST00000476594	RLF	Q13129	1914 aa		12.02	□□□□□ -0.49
CCM2-208	ENST00000476594	MCC	P23508	829 aa		12.02	□□□□□ -0.49
CCM2-208	ENST00000476594	PDE4A	P27815	886 aa		12.02	□□□□□ -0.49
CCM2-208	ENST00000476594	CCL14	Q16627	93 aa		12.02	□□□□□ -0.49
CCM2-208	ENST00000476594	TKFC	Q3LXA3	575 aa		12.02	□□□□□ -0.49
CCM2-208	ENST00000476594	CPXCR1	Q8N123	301 aa		12.02	□□□□□ -0.49
CCM2-208	ENST00000476594	CHST13	Q8NET6	341 aa		12.02	□□□□□ -0.49
CCM2-208	ENST00000476594	NBPF3	Q9H094	633 aa		12.02	□□□□□ -0.49
CCM2-208	ENST00000476594	SLC38A10	Q9HBR0	1119 aa		12.02	□□□□□ -0.49
CCM2-208	ENST00000476594	NRBP1	Q9UHY1	535 aa		12.02	□□□□□ -0.49
CCM2-208	ENST00000476594	PARP14	Q460N5	1801 aa		12.02	□□□□□ -0.49
CCM2-208	ENST00000476594	GSPT1	P15170	499 aa	Known RBP	12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	NOV	P48745	357 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	SLC4A3	P48751	1232 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	TRIM32	Q13049	653 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	KIAA1211	Q6ZU35	1233 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	DGKH	Q86XP1	1220 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	ANKRD35	Q8N283	1001 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	MSL3	Q8N5Y2	521 aa	Known RBP	12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	REPS2	Q8NFH8	660 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	NPLOC4	Q8TAT6	608 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	UBAC1	Q9BSL1	405 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	IL17RB	Q9NRM6	502 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	OGDHL	Q9ULD0	1010 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	MTMR7	Q9Y216	660 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	CNPY2	Q9Y2B0	182 aa		12.01	□□□□□ -0.49
CCM2-208	ENST00000476594	EVI5	O60447	810 aa		12	□□□□□ -0.49
CCM2-208	ENST00000476594	NMT2	O60551	498 aa		12	□□□□□ -0.49
CCM2-208	ENST00000476594	CYP2C19	P33261	490 aa		12	□□□□□ -0.49
CCM2-208	ENST00000476594	GPATCH4	Q5T3I0	446 aa	Known RBP	12	□□□□□ -0.49
CCM2-208	ENST00000476594	CASC1	Q6TDU7	716 aa		12	□□□□□ -0.49
CCM2-208	ENST00000476594	TBC1D10C	Q8IV04	446 aa		12	□□□□□ -0.49
CCM2-208	ENST00000476594	MAML3	Q96JK9	1138 aa		12	□□□□□ -0.49
CCM2-208	ENST00000476594	C11orf49	Q9H6J7	331 aa		12	□□□□□ -0.49
CCM2-208	ENST00000476594	ACAD9	Q9H845	621 aa		12	□□□□□ -0.49
CCM2-208	ENST00000476594	KAT14	Q9H8E8	782 aa		12	□□□□□ -0.49
CCM2-208	ENST00000476594	RAVER2	Q9HCJ3	691 aa	Known RBP	12	□□□□□ -0.49
CCM2-208	ENST00000476594	INCENP	Q9NQS7	918 aa		12	□□□□□ -0.49
CCM2-208	ENST00000476594	DDX20	Q9UHI6	824 aa	Known RBP	12	□□□□□ -0.49
CCM2-208	ENST00000476594	COL11A1	P12107	1806 aa	Predicted RBP	12	□□□□□ -0.49
CCM2-208	ENST00000476594	LAMA4	Q16363	1823 aa		12	□□□□□ -0.49
CCM2-208	ENST00000476594	MKI67	P46013	3256 aa	Known RBP	11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	ERICH2	A1L162	156 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	SEPT4	O43236	478 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	COBL	O75128	1261 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	KDM4A	O75164	1064 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	CYBA	P13498	195 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	CHML	P26374	656 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	CCND3	P30281	292 aa	Predicted RBP	11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	SART3	Q15020	963 aa	Known RBP	11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	KCTD1	Q719H9	257 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	UBE2Q1	Q7Z7E8	422 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	RALYL	Q86SE5	291 aa	Known RBP	11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	ARRDC4	Q8NCT1	418 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	PAWR	Q96IZ0	340 aa	Known RBP	11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	TMEM47	Q9BQJ4	181 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	TINF2	Q9BSI4	451 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	FLRT1	Q9NZU1	646 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	PFAS	O15067	1338 aa		11.99	□□□□□ -0.49
CCM2-208	ENST00000476594	NEDD4	P46934	1319 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms