RNA–Protein interactions for RNA: ENST00000476104.1

SLC48A1-204, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-204ENST00000476104 GMCL1P1Q8NEA9 526 aa16.84■□□□□ 0.29
SLC48A1-204ENST00000476104 DIS3Q9Y2L1 958 aaKnown RBP16.84■□□□□ 0.29
SLC48A1-204ENST00000476104 FRMPD3Q5JV73 1810 aa16.84■□□□□ 0.29
SLC48A1-204ENST00000476104 TSPY2A6NKD2 308 aa16.83■□□□□ 0.28
SLC48A1-204ENST00000476104 BMP3P12645 472 aa16.83■□□□□ 0.28
SLC48A1-204ENST00000476104 ZNF792Q3KQV3 632 aa16.83■□□□□ 0.28
SLC48A1-204ENST00000476104 SLFN13Q68D06 897 aa16.83■□□□□ 0.28
SLC48A1-204ENST00000476104 PLIN4Q96Q06 1357 aa16.83■□□□□ 0.28
SLC48A1-204ENST00000476104 TINF2Q9BSI4 451 aa16.83■□□□□ 0.28
SLC48A1-204ENST00000476104 UBE2OQ9C0C9 1292 aaKnown RBP16.83■□□□□ 0.28
SLC48A1-204ENST00000476104 RWDD1Q9H446 243 aaPredicted RBP16.83■□□□□ 0.28
SLC48A1-204ENST00000476104 HELLSQ9NRZ9 838 aa16.83■□□□□ 0.28
SLC48A1-204ENST00000476104 PRKAG2Q9UGJ0 569 aa16.83■□□□□ 0.28
SLC48A1-204ENST00000476104 CNPY2Q9Y2B0 182 aa16.83■□□□□ 0.28
SLC48A1-204ENST00000476104 ATP2A1O14983 1001 aa16.82■□□□□ 0.28
SLC48A1-204ENST00000476104 RARBP10826 455 aa16.82■□□□□ 0.28
SLC48A1-204ENST00000476104 CTDSPL2Q05D32 466 aa16.82■□□□□ 0.28
SLC48A1-204ENST00000476104 IKQ13123 557 aaPredicted RBP16.82■□□□□ 0.28
SLC48A1-204ENST00000476104 RAVER2Q9HCJ3 691 aaKnown RBP16.82■□□□□ 0.28
SLC48A1-204ENST00000476104 FBXO40Q9UH90 709 aa16.82■□□□□ 0.28
SLC48A1-204ENST00000476104 STX8Q9UNK0 236 aa16.82■□□□□ 0.28
SLC48A1-204ENST00000476104 TRIM6-TRIM34B2RNG4 842 aa16.81■□□□□ 0.28
SLC48A1-204ENST00000476104 TMEM232C9JQI7 657 aa16.81■□□□□ 0.28
SLC48A1-204ENST00000476104 FDX1P10109 184 aa16.81■□□□□ 0.28
SLC48A1-204ENST00000476104 SLC1A4P43007 532 aa16.81■□□□□ 0.28
SLC48A1-204ENST00000476104 TICAM2Q86XR7 235 aa16.81■□□□□ 0.28
SLC48A1-204ENST00000476104 CHURC1Q8WUH1 139 aa16.81■□□□□ 0.28
SLC48A1-204ENST00000476104 LBHD1Q9BQE6 289 aaPredicted RBP16.81■□□□□ 0.28
SLC48A1-204ENST00000476104 LNPKQ9C0E8 428 aa16.81■□□□□ 0.28
SLC48A1-204ENST00000476104 SLC38A10Q9HBR0 1119 aa16.81■□□□□ 0.28
SLC48A1-204ENST00000476104 TOMM22Q9NS69 142 aa16.81■□□□□ 0.28
SLC48A1-204ENST00000476104 RANBP2P49792 3224 aaKnown RBP16.81■□□□□ 0.28
SLC48A1-204ENST00000476104 RANBP6O60518 1105 aaKnown RBP16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 STAT2P52630 851 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 OAZ1P54368 228 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 RTP1P59025 263 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 MCMDC2Q4G0Z9 681 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 FAM160B2Q86V87 743 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 ANKRD35Q8N283 1001 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 MSL3Q8N5Y2 521 aaKnown RBP16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 CHST13Q8NET6 341 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 GMCL1Q96IK5 515 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 XPNPEP3Q9NQH7 507 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 ATP11BQ9Y2G3 1177 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 RIPK3Q9Y572 518 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 SMCHD1A6NHR9 2005 aa16.8■□□□□ 0.28
SLC48A1-204ENST00000476104 FOXP2O15409 715 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 AKR1A1P14550 325 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 MCCP23508 829 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 ADCYAP1R1P41586 468 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 MDM2Q00987 491 aaPredicted RBP16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 LRRC41Q15345 812 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 ALX1Q15699 326 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 VPS53Q5VIR6 699 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 B4GALNT3Q6L9W6 998 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 SLC39A5Q6ZMH5 540 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 RNF180Q86T96 592 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 TDHQ8IZJ6 230 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 RILPL2Q969X0 211 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 ANAPC4Q9UJX5 808 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 PLXNA1Q9UIW2 1896 aa16.79■□□□□ 0.28
SLC48A1-204ENST00000476104 TAL1P17542 331 aaPredicted RBP16.78■□□□□ 0.28
SLC48A1-204ENST00000476104 STAG1Q8WVM7 1258 aa16.78■□□□□ 0.28
SLC48A1-204ENST00000476104 FERMT2Q96AC1 680 aa16.78■□□□□ 0.28
SLC48A1-204ENST00000476104 CHMP4CQ96CF2 233 aa16.78■□□□□ 0.28
SLC48A1-204ENST00000476104 FAM227BQ96M60 508 aa16.78■□□□□ 0.28
SLC48A1-204ENST00000476104 INCENPQ9NQS7 918 aa16.78■□□□□ 0.28
SLC48A1-204ENST00000476104 HOMER2Q9NSB8 354 aa16.78■□□□□ 0.28
SLC48A1-204ENST00000476104 SYNGAP1Q96PV0 1343 aa16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 A0A0D9SFI3 127 aa16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 SOX1O00570 391 aaPredicted RBP16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 ORC4O43929 436 aa16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 NMT2O60551 498 aa16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 MFAP1P55081 439 aaKnown RBP16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 RRP12Q5JTH9 1297 aaKnown RBP16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 RCSD1Q6JBY9 416 aa16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 ZNF467Q7Z7K2 595 aaPredicted RBP16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 SMC5Q8IY18 1101 aa16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 LRCH3Q96II8 777 aa16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 ZHX1Q9UKY1 873 aaPredicted RBP16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 FAM184BQ9ULE4 1060 aa16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 MTMR7Q9Y216 660 aa16.77■□□□□ 0.28
SLC48A1-204ENST00000476104 DNAJC25-GNG10A0A024R161 153 aa16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 PGK1P00558 417 aa16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 FGAP02671 866 aa16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 ZNF865P0CJ78 1059 aaPredicted RBP16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 CCDC96Q2M329 555 aa16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 LRIT3Q3SXY7 679 aa16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 MAMDC4Q6UXC1 1216 aa16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 CHD1LQ86WJ1 897 aa16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 ACAD9Q9H845 621 aa16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 PRDM5Q9NQX1 630 aaPredicted RBP16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 IL17RBQ9NRM6 502 aa16.76■□□□□ 0.27
SLC48A1-204ENST00000476104 PLA2G6O60733 806 aa16.75■□□□□ 0.27
SLC48A1-204ENST00000476104 SNAI1O95863 264 aaPredicted RBP16.75■□□□□ 0.27
SLC48A1-204ENST00000476104 HSPD1P10809 573 aaKnown RBP16.75■□□□□ 0.27
SLC48A1-204ENST00000476104 TKFCQ3LXA3 575 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms