RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 NECAB3Q96P71 396 aaPredicted RBP18.43■□□□□ 0.54
NME1-206ENST00000475573 PPP1R12CQ9BZL4 782 aa18.43■□□□□ 0.54
NME1-206ENST00000475573 CCDC8Q9H0W5 538 aaPredicted RBP18.43■□□□□ 0.54
NME1-206ENST00000475573 NKX2-4Q9H2Z4 354 aa18.43■□□□□ 0.54
NME1-206ENST00000475573 IL23AQ9NPF7 189 aa18.43■□□□□ 0.54
NME1-206ENST00000475573 ZNF214Q9UL59 606 aaPredicted RBP18.43■□□□□ 0.54
NME1-206ENST00000475573 ARVCFO00192 962 aa18.42■□□□□ 0.54
NME1-206ENST00000475573 VWA5AO00534 786 aa18.42■□□□□ 0.54
NME1-206ENST00000475573 TLR3O15455 904 aaKnown RBP18.42■□□□□ 0.54
NME1-206ENST00000475573 BMP1P13497 986 aa18.42■□□□□ 0.54
NME1-206ENST00000475573 FAM126BQ8IXS8 530 aa18.42■□□□□ 0.54
NME1-206ENST00000475573 SPC25Q9HBM1 224 aa18.42■□□□□ 0.54
NME1-206ENST00000475573 FBXO28Q9NVF7 368 aa18.42■□□□□ 0.54
NME1-206ENST00000475573 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
NME1-206ENST00000475573 PPP1R9AQ9ULJ8 1098 aa18.42■□□□□ 0.54
NME1-206ENST00000475573 HCN4Q9Y3Q4 1203 aa18.42■□□□□ 0.54
NME1-206ENST00000475573 SNAI1O95863 264 aaPredicted RBP18.41■□□□□ 0.54
NME1-206ENST00000475573 ASGR1P07306 291 aa18.41■□□□□ 0.54
NME1-206ENST00000475573 C6orf222P0C671 652 aaPredicted RBP18.41■□□□□ 0.54
NME1-206ENST00000475573 AKR1B1P15121 316 aa18.41■□□□□ 0.54
NME1-206ENST00000475573 MAMDC4Q6UXC1 1216 aa18.41■□□□□ 0.54
NME1-206ENST00000475573 EAF2Q96CJ1 260 aaPredicted RBP18.41■□□□□ 0.54
NME1-206ENST00000475573 DCP1AQ9NPI6 582 aaPredicted RBP18.41■□□□□ 0.54
NME1-206ENST00000475573 YBX2Q9Y2T7 364 aaKnown RBP18.41■□□□□ 0.54
NME1-206ENST00000475573 NOP58Q9Y2X3 529 aaKnown RBP18.41■□□□□ 0.54
NME1-206ENST00000475573 PIEZO1Q92508 2521 aa18.41■□□□□ 0.54
NME1-206ENST00000475573 MCM3APO60318 1980 aa18.41■□□□□ 0.54
NME1-206ENST00000475573 ATP8B2P98198 1209 aa18.4■□□□□ 0.54
NME1-206ENST00000475573 REPS2Q8NFH8 660 aa18.4■□□□□ 0.54
NME1-206ENST00000475573 SDR42E1Q8WUS8 393 aa18.4■□□□□ 0.54
NME1-206ENST00000475573 VTI1AQ96AJ9 217 aa18.4■□□□□ 0.54
NME1-206ENST00000475573 CCDC17Q96LX7 622 aa18.4■□□□□ 0.54
NME1-206ENST00000475573 UPF3AQ9H1J1 476 aaKnown RBP18.4■□□□□ 0.54
NME1-206ENST00000475573 TRANK1O15050 2925 aa18.39■□□□□ 0.53
NME1-206ENST00000475573 CYP2D6P10635 497 aa18.39■□□□□ 0.53
NME1-206ENST00000475573 GJA9P57773 515 aa18.39■□□□□ 0.53
NME1-206ENST00000475573 TTF1Q15361 905 aaPredicted RBP18.39■□□□□ 0.53
NME1-206ENST00000475573 ZNF467Q7Z7K2 595 aaPredicted RBP18.39■□□□□ 0.53
NME1-206ENST00000475573 TEX13BQ9BXU2 312 aa18.39■□□□□ 0.53
NME1-206ENST00000475573 PRRC2BQ5JSZ5 2229 aaKnown RBP18.38■□□□□ 0.53
NME1-206ENST00000475573 DNAJC25-GNG10A0A024R161 153 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 BCAR3O75815 825 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 CD4P01730 458 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 FGBP02675 491 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 PDE6AP16499 860 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 CYP2C18P33260 490 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 TFF2Q03403 129 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 ACVR2BQ13705 512 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 PPP2R2DQ66LE6 453 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 MICALL1Q8N3F8 863 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 DDX11Q96FC9 970 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 DYNLL2Q96FJ2 89 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 GOPCQ9HD26 462 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 TNNQ9UQP3 1299 aa18.38■□□□□ 0.53
NME1-206ENST00000475573 BAZ2AQ9UIF9 1905 aaKnown RBP18.38■□□□□ 0.53
NME1-206ENST00000475573 ERC2O15083 957 aa18.37■□□□□ 0.53
NME1-206ENST00000475573 ADCY6O43306 1168 aa18.37■□□□□ 0.53
NME1-206ENST00000475573 IRX5P78411 483 aaPredicted RBP18.37■□□□□ 0.53
NME1-206ENST00000475573 GNASQ5JWF2 1037 aa18.37■□□□□ 0.53
NME1-206ENST00000475573 SLC9C2Q5TAH2 1124 aa18.37■□□□□ 0.53
NME1-206ENST00000475573 LRFN3Q9BTN0 628 aa18.37■□□□□ 0.53
NME1-206ENST00000475573 ABHD16BQ9H3Z7 469 aa18.37■□□□□ 0.53
NME1-206ENST00000475573 HIPK3Q9H422 1215 aa18.37■□□□□ 0.53
NME1-206ENST00000475573 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.37■□□□□ 0.53
NME1-206ENST00000475573 EEF2P13639 858 aaKnown RBP18.36■□□□□ 0.53
NME1-206ENST00000475573 KCNQ1P51787 676 aa18.36■□□□□ 0.53
NME1-206ENST00000475573 FAM83BQ5T0W9 1011 aa18.36■□□□□ 0.53
NME1-206ENST00000475573 SNRNP48Q6IEG0 339 aaKnown RBP18.36■□□□□ 0.53
NME1-206ENST00000475573 OTOP2Q7RTS6 562 aa18.36■□□□□ 0.53
NME1-206ENST00000475573 LCORLQ8N3X6 602 aa18.36■□□□□ 0.53
NME1-206ENST00000475573 CLUAP1Q96AJ1 413 aa18.36■□□□□ 0.53
NME1-206ENST00000475573 KANSL2Q9H9L4 492 aa18.36■□□□□ 0.53
NME1-206ENST00000475573 PCDHA11Q9Y5I1 949 aa18.36■□□□□ 0.53
NME1-206ENST00000475573 ZNF532Q9HCE3 1301 aa18.35■□□□□ 0.53
NME1-206ENST00000475573 NKX3-2P78367 333 aa18.35■□□□□ 0.53
NME1-206ENST00000475573 SKIV2LQ15477 1246 aaKnown RBP18.35■□□□□ 0.53
NME1-206ENST00000475573 CCDC144BQ3MJ40 725 aa18.35■□□□□ 0.53
NME1-206ENST00000475573 FRAT1Q92837 279 aaPredicted RBP18.35■□□□□ 0.53
NME1-206ENST00000475573 LRRC37A2A6NM11 1700 aa18.35■□□□□ 0.53
NME1-206ENST00000475573 MUC6Q6W4X9 2439 aa18.34■□□□□ 0.53
NME1-206ENST00000475573 TCRBV5S4A2TA0A5A2 114 aa18.34■□□□□ 0.53
NME1-206ENST00000475573 CDK8P49336 464 aa18.34■□□□□ 0.53
NME1-206ENST00000475573 RABGGTBP53611 331 aa18.34■□□□□ 0.53
NME1-206ENST00000475573 TMEM31Q5JXX7 168 aa18.34■□□□□ 0.53
NME1-206ENST00000475573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.34■□□□□ 0.53
NME1-206ENST00000475573 AACSQ86V21 672 aa18.34■□□□□ 0.53
NME1-206ENST00000475573 TMEM57Q8N5G2 664 aa18.34■□□□□ 0.53
NME1-206ENST00000475573 SLC43A3Q8NBI5 491 aa18.34■□□□□ 0.53
NME1-206ENST00000475573 SLF1Q9BQI6 1058 aa18.34■□□□□ 0.53
NME1-206ENST00000475573 ATP8A2Q9NTI2 1148 aa18.34■□□□□ 0.53
NME1-206ENST00000475573 SLC4A7Q9Y6M7 1214 aa18.34■□□□□ 0.53
NME1-206ENST00000475573 ATP2A1O14983 1001 aa18.33■□□□□ 0.52
NME1-206ENST00000475573 CTAGE5O15320 804 aa18.33■□□□□ 0.52
NME1-206ENST00000475573 GTPBP6O43824 516 aaPredicted RBP18.33■□□□□ 0.52
NME1-206ENST00000475573 RAD21O60216 631 aa18.33■□□□□ 0.52
NME1-206ENST00000475573 POU3F3P20264 500 aaPredicted RBP18.33■□□□□ 0.52
NME1-206ENST00000475573 C16orf86Q6ZW13 317 aa18.33■□□□□ 0.52
NME1-206ENST00000475573 AMOTL1Q8IY63 956 aa18.33■□□□□ 0.52
NME1-206ENST00000475573 EPHX3Q9H6B9 360 aa18.33■□□□□ 0.52
NME1-206ENST00000475573 C1orf115Q9H7X2 142 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms