RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 GOLGA8HP0CJ92 632 aa17.02■□□□□ 0.32
LMNA-213ENST00000473598 HTRA3P83110 453 aa17.02■□□□□ 0.32
LMNA-213ENST00000473598 PKN1Q16512 942 aa17.02■□□□□ 0.32
LMNA-213ENST00000473598 DCAF15Q66K64 600 aa17.02■□□□□ 0.32
LMNA-213ENST00000473598 OTUD7BQ6GQQ9 843 aa17.02■□□□□ 0.32
LMNA-213ENST00000473598 ZSCAN16Q9H4T2 348 aaPredicted RBP17.02■□□□□ 0.32
LMNA-213ENST00000473598 GJB4Q9NTQ9 266 aa17.02■□□□□ 0.32
LMNA-213ENST00000473598 CELF2O95319 508 aaKnown RBP17.01■□□□□ 0.31
LMNA-213ENST00000473598 SMARCA1P28370 1054 aa17.01■□□□□ 0.31
LMNA-213ENST00000473598 RESTQ13127 1097 aa17.01■□□□□ 0.31
LMNA-213ENST00000473598 ZSCAN23Q3MJ62 389 aa17.01■□□□□ 0.31
LMNA-213ENST00000473598 ASPRV1Q53RT3 343 aa17.01■□□□□ 0.31
LMNA-213ENST00000473598 KRT40Q6A162 431 aa17.01■□□□□ 0.31
LMNA-213ENST00000473598 ZNF710Q8N1W2 664 aa17.01■□□□□ 0.31
LMNA-213ENST00000473598 RBM27Q9P2N5 1060 aaKnown RBP17.01■□□□□ 0.31
LMNA-213ENST00000473598 SYNPO2Q9UMS6 1093 aa17.01■□□□□ 0.31
LMNA-213ENST00000473598 ASNSP08243 561 aa17.01■□□□□ 0.31
LMNA-213ENST00000473598 TRIM29Q14134 588 aa17.01■□□□□ 0.31
LMNA-213ENST00000473598 FOXD4L6Q3SYB3 417 aaPredicted RBP17.01■□□□□ 0.31
LMNA-213ENST00000473598 FOXD4L3Q6VB84 417 aaPredicted RBP17.01■□□□□ 0.31
LMNA-213ENST00000473598 TMEM87AQ8NBN3 555 aa17.01■□□□□ 0.31
LMNA-213ENST00000473598 SPZ1Q9BXG8 430 aa17.01■□□□□ 0.31
LMNA-213ENST00000473598 SSC5DA1L4H1 1573 aa17■□□□□ 0.31
LMNA-213ENST00000473598 hCG_1642624A0A1W2PR95 340 aa17■□□□□ 0.31
LMNA-213ENST00000473598 CYTH3O43739 400 aa17■□□□□ 0.31
LMNA-213ENST00000473598 PRKG1Q13976 671 aa17■□□□□ 0.31
LMNA-213ENST00000473598 SLC35G1Q2M3R5 365 aa17■□□□□ 0.31
LMNA-213ENST00000473598 GMCL1P1Q8NEA9 526 aa17■□□□□ 0.31
LMNA-213ENST00000473598 ZNF341Q9BYN7 854 aa17■□□□□ 0.31
LMNA-213ENST00000473598 ARHGEF10LQ9HCE6 1279 aa17■□□□□ 0.31
LMNA-213ENST00000473598 FRMPD2Q68DX3 1309 aaPredicted RBP16.99■□□□□ 0.31
LMNA-213ENST00000473598 CTNND1O60716 968 aaKnown RBP16.99■□□□□ 0.31
LMNA-213ENST00000473598 ZNF543Q08ER8 600 aa16.99■□□□□ 0.31
LMNA-213ENST00000473598 GPATCH4Q5T3I0 446 aaKnown RBP16.99■□□□□ 0.31
LMNA-213ENST00000473598 MOB2Q70IA6 237 aa16.99■□□□□ 0.31
LMNA-213ENST00000473598 GINM1Q9NU53 330 aa16.99■□□□□ 0.31
LMNA-213ENST00000473598 TRPM7Q96QT4 1865 aa16.99■□□□□ 0.31
LMNA-213ENST00000473598 A0A1W2PRG0 241 aa16.99■□□□□ 0.31
LMNA-213ENST00000473598 PFKFB3Q16875 520 aaPredicted RBP16.99■□□□□ 0.31
LMNA-213ENST00000473598 SUPT20HL1Q3ZLR7 823 aa16.99■□□□□ 0.31
LMNA-213ENST00000473598 SLFN13Q68D06 897 aa16.99■□□□□ 0.31
LMNA-213ENST00000473598 PLCD3Q8N3E9 789 aa16.99■□□□□ 0.31
LMNA-213ENST00000473598 DCAF4Q8WV16 495 aa16.99■□□□□ 0.31
LMNA-213ENST00000473598 ZNF112Q9UJU3 913 aa16.99■□□□□ 0.31
LMNA-213ENST00000473598 TMX2Q9Y320 296 aa16.99■□□□□ 0.31
LMNA-213ENST00000473598 F5H6K3 240 aa16.98■□□□□ 0.31
LMNA-213ENST00000473598 SCG2P13521 617 aa16.98■□□□□ 0.31
LMNA-213ENST00000473598 XBP1P17861 261 aa16.98■□□□□ 0.31
LMNA-213ENST00000473598 APLP1P51693 650 aa16.98■□□□□ 0.31
LMNA-213ENST00000473598 KLRC3Q07444 240 aa16.98■□□□□ 0.31
LMNA-213ENST00000473598 CPVLQ9H3G5 476 aa16.98■□□□□ 0.31
LMNA-213ENST00000473598 RIOX1Q9H6W3 641 aa16.98■□□□□ 0.31
LMNA-213ENST00000473598 GDPD2Q9HCC8 539 aa16.98■□□□□ 0.31
LMNA-213ENST00000473598 TMEM63CQ9P1W3 806 aa16.98■□□□□ 0.31
LMNA-213ENST00000473598 CGNQ9P2M7 1197 aaKnown RBP16.98■□□□□ 0.31
LMNA-213ENST00000473598 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.98■□□□□ 0.31
LMNA-213ENST00000473598 MMP1P03956 469 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 ECE1P42892 770 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 DNM1Q05193 864 aaKnown RBP16.97■□□□□ 0.31
LMNA-213ENST00000473598 FAM173BQ6P4H8 233 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 GMCL1Q96IK5 515 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 GPCPD1Q9NPB8 672 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 RAD21O60216 631 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 SLC1A4P43007 532 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 KIF23Q02241 960 aaPredicted RBP16.97■□□□□ 0.31
LMNA-213ENST00000473598 CCDC96Q2M329 555 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 ACER1Q8TDN7 264 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 PIBF1Q8WXW3 757 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 UBA5Q9GZZ9 404 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 VPS54Q9P1Q0 977 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 CNPY2Q9Y2B0 182 aa16.97■□□□□ 0.31
LMNA-213ENST00000473598 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.31
LMNA-213ENST00000473598 NDUFB10O96000 172 aa16.96■□□□□ 0.31
LMNA-213ENST00000473598 INPP5BP32019 993 aa16.96■□□□□ 0.31
LMNA-213ENST00000473598 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
LMNA-213ENST00000473598 GABPB1Q06547 395 aaPredicted RBP16.96■□□□□ 0.31
LMNA-213ENST00000473598 KCTD1Q719H9 257 aa16.96■□□□□ 0.31
LMNA-213ENST00000473598 SHISA4Q96DD7 197 aa16.96■□□□□ 0.31
LMNA-213ENST00000473598 ZFP91Q96JP5 570 aaPredicted RBP16.96■□□□□ 0.31
LMNA-213ENST00000473598 SH2D4AQ9H788 454 aa16.96■□□□□ 0.31
LMNA-213ENST00000473598 KCNJ14Q9UNX9 436 aa16.96■□□□□ 0.31
LMNA-213ENST00000473598 PHIPQ8WWQ0 1821 aa16.96■□□□□ 0.31
LMNA-213ENST00000473598 KIF28PB7ZC32 967 aa16.96■□□□□ 0.3
LMNA-213ENST00000473598 GADD45BO75293 160 aaPredicted RBP16.96■□□□□ 0.3
LMNA-213ENST00000473598 HSPA6P17066 643 aa16.96■□□□□ 0.3
LMNA-213ENST00000473598 TTBK2Q6IQ55 1244 aa16.96■□□□□ 0.3
LMNA-213ENST00000473598 BRAPQ7Z569 592 aa16.96■□□□□ 0.3
LMNA-213ENST00000473598 RRP36Q96EU6 259 aaKnown RBP16.96■□□□□ 0.3
LMNA-213ENST00000473598 WRNIP1Q96S55 665 aa16.96■□□□□ 0.3
LMNA-213ENST00000473598 FEZ1Q99689 392 aa16.96■□□□□ 0.3
LMNA-213ENST00000473598 PHF20Q9BVI0 1012 aa16.96■□□□□ 0.3
LMNA-213ENST00000473598 GBA2Q9HCG7 927 aaPredicted RBP16.96■□□□□ 0.3
LMNA-213ENST00000473598 GOPCQ9HD26 462 aa16.96■□□□□ 0.3
LMNA-213ENST00000473598 PAPPA2Q9BXP8 1791 aa16.96■□□□□ 0.3
LMNA-213ENST00000473598 IRX5P78411 483 aaPredicted RBP16.95■□□□□ 0.3
LMNA-213ENST00000473598 SAFBQ15424 915 aaKnown RBP eCLIP16.95■□□□□ 0.3
LMNA-213ENST00000473598 KLRG1Q96E93 195 aa16.95■□□□□ 0.3
LMNA-213ENST00000473598 U2AF2P26368 475 aaKnown RBP eCLIP16.94■□□□□ 0.3
LMNA-213ENST00000473598 KRT85P78386 507 aa16.94■□□□□ 0.3
LMNA-213ENST00000473598 CCDC84Q86UT8 332 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms