RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 U2AF2P26368 475 aaKnown RBP eCLIP10.04□□□□□ -0.8
HDLBP-233ENST00000470710 CALML3P27482 149 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 SLC16A2P36021 539 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 STAT2P52630 851 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 MTMR2Q13614 643 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 TTLL12Q14166 644 aaPredicted RBP10.04□□□□□ -0.8
HDLBP-233ENST00000470710 SAFBQ15424 915 aaKnown RBP eCLIP10.04□□□□□ -0.8
HDLBP-233ENST00000470710 SH3D19Q5HYK7 790 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 WWC2Q6AWC2 1192 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 GALNT17Q6IS24 598 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 BRAPQ7Z569 592 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 FERMT3Q86UX7 667 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 ERO1BQ86YB8 467 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 CCDC148Q8NFR7 591 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 CCDC12Q8WUD4 166 aaPredicted RBP10.04□□□□□ -0.8
HDLBP-233ENST00000470710 CHURC1Q8WUH1 139 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 PIBF1Q8WXW3 757 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 SHISA4Q96DD7 197 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 PIGSQ96S52 555 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 PHF20Q9BVI0 1012 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 FOXP1Q9H334 677 aaPredicted RBP10.04□□□□□ -0.8
HDLBP-233ENST00000470710 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 GJB4Q9NTQ9 266 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 VPS54Q9P1Q0 977 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 ISY1Q9ULR0 285 aaKnown RBP10.04□□□□□ -0.8
HDLBP-233ENST00000470710 AFG3L2Q9Y4W6 797 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 POLR2AP24928 1970 aaKnown RBP10.04□□□□□ -0.8
HDLBP-233ENST00000470710 DOCK1Q14185 1865 aa10.04□□□□□ -0.8
HDLBP-233ENST00000470710 ESYT2A0FGR8 921 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 SPDYE5A6NIY4 337 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 TRIM75PA6NK02 468 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 VCAM1P19320 739 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 PPATQ06203 517 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 NPY5RQ15761 445 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 ZYXQ15942 572 aaKnown RBP10.03□□□□□ -0.8
HDLBP-233ENST00000470710 ATL3Q6DD88 541 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 MCTP1Q6DN14 999 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 CHADLQ6NUI6 762 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 PPP1R18Q6NYC8 613 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 HEATR3Q7Z4Q2 680 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 HOMER1Q86YM7 354 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 DIS3L2Q8IYB7 885 aaKnown RBP10.03□□□□□ -0.8
HDLBP-233ENST00000470710 DAGLBQ8NCG7 672 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 ZNF526Q8TF50 670 aaPredicted RBP10.03□□□□□ -0.8
HDLBP-233ENST00000470710 GPKOWQ92917 476 aaPredicted RBP eCLIP10.03□□□□□ -0.8
HDLBP-233ENST00000470710 VAT1LQ9HCJ6 419 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 BRMS1Q9HCU9 246 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 KCNJ14Q9UNX9 436 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 MYH4Q9Y623 1939 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 PAPPA2Q9BXP8 1791 aa10.03□□□□□ -0.8
HDLBP-233ENST00000470710 KIF28PB7ZC32 967 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 CXCL11O14625 94 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-233ENST00000470710 MCM4P33991 863 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 KRT2P35908 639 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 NLRP5P59047 1200 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 TRAF1Q13077 416 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 IKQ13123 557 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-233ENST00000470710 PPIL2Q13356 520 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 CDC37Q16543 378 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-233ENST00000470710 QRICH1Q2TAL8 776 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 MOB2Q70IA6 237 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 CLMNQ96JQ2 1002 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 ZMYND12Q9H0C1 365 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 ELP3Q9H9T3 547 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 GBA2Q9HCG7 927 aaPredicted RBP10.02□□□□□ -0.81
HDLBP-233ENST00000470710 TMOD4Q9NZQ9 345 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 PRR12Q9ULL5 1215 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 KCNH4Q9UQ05 1017 aa10.02□□□□□ -0.81
HDLBP-233ENST00000470710 BAZ2BQ9UIF8 2168 aaKnown RBP10.01□□□□□ -0.81
HDLBP-233ENST00000470710 A0A0G2JLL6 359 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-233ENST00000470710 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 BTBD18B2RXH4 712 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 GOLGA6L22H0YM25 854 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 PPP1R11O60927 126 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-233ENST00000470710 CELF2O95319 508 aaKnown RBP10.01□□□□□ -0.81
HDLBP-233ENST00000470710 FDX1P10109 184 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 HMGCS2P54868 508 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 NAPAP54920 295 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 KRT85P78386 507 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 GNL2Q13823 731 aaKnown RBP10.01□□□□□ -0.81
HDLBP-233ENST00000470710 NFKBIBQ15653 356 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 TYW1BQ6NUM6 668 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 PRRT2Q7Z6L0 340 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-233ENST00000470710 NOSTRINQ8IVI9 506 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 TEX2Q8IWB9 1127 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 C2orf69Q8N8R5 385 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 PRPF38AQ8NAV1 312 aaKnown RBP10.01□□□□□ -0.81
HDLBP-233ENST00000470710 TMEM87AQ8NBN3 555 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 TNFRSF25Q93038 417 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 SLF1Q9BQI6 1058 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 GLT8D2Q9H1C3 349 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 RANBP17Q9H2T7 1088 aaKnown RBP10.01□□□□□ -0.81
HDLBP-233ENST00000470710 RPAP3Q9H6T3 665 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-233ENST00000470710 GPBP1L1Q9HC44 474 aaPredicted RBP10.01□□□□□ -0.81
HDLBP-233ENST00000470710 C6orf50Q9HD87 102 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 PPP1R9AQ9ULJ8 1098 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 PCDHA4Q9UN74 947 aa10.01□□□□□ -0.81
HDLBP-233ENST00000470710 ATAD5Q96QE3 1844 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 M0R2N6 131 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms