RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 ZKSCAN3Q9BRR0 538 aa11.45□□□□□ -0.58
SRRT-208ENST00000469602 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
SRRT-208ENST00000469602 LSG1Q9H089 658 aaKnown RBP11.45□□□□□ -0.58
SRRT-208ENST00000469602 SLC38A10Q9HBR0 1119 aa11.45□□□□□ -0.58
SRRT-208ENST00000469602 ISY1Q9ULR0 285 aaKnown RBP11.45□□□□□ -0.58
SRRT-208ENST00000469602 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
SRRT-208ENST00000469602 RBM8AQ9Y5S9 174 aaKnown RBP11.45□□□□□ -0.58
SRRT-208ENST00000469602 PLXNA1Q9UIW2 1896 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 POTEFA5A3E0 1075 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 ATP2A1O14983 1001 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 STRNO43815 780 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 PLA2G6O60733 806 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 ZBED4O75132 1171 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 HMGCRP04035 888 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 COPB2P35606 906 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 TRDNQ13061 729 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 IKQ13123 557 aaPredicted RBP11.44□□□□□ -0.58
SRRT-208ENST00000469602 MTFR1Q15390 333 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 KCTD1Q719H9 257 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 RASGRP2Q7LDG7 609 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 NCAPG2Q86XI2 1143 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 RIOX2Q8IUF8 465 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 TRMT44Q8IYL2 757 aaKnown RBP11.44□□□□□ -0.58
SRRT-208ENST00000469602 ENAHQ8N8S7 591 aaPredicted RBP11.44□□□□□ -0.58
SRRT-208ENST00000469602 APBA2Q99767 749 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 TEX13BQ9BXU2 312 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 ANO2Q9NQ90 1003 aa11.44□□□□□ -0.58
SRRT-208ENST00000469602 TNKSO95271 1327 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 E7EWF7 191 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 HOXC6P09630 235 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 FDX1P10109 184 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 PDHBP11177 359 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 FCER1AP12319 257 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 CCL5P13501 91 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 ZKSCAN1P17029 563 aaPredicted RBP11.43□□□□□ -0.58
SRRT-208ENST00000469602 ADORA2AP29274 412 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 OAZ1P54368 228 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 CCDC96Q2M329 555 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 SNRNP48Q6IEG0 339 aaKnown RBP11.43□□□□□ -0.58
SRRT-208ENST00000469602 ABRAQ8N0Z2 381 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 TRIB2Q92519 343 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 ANKS1AQ92625 1134 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 CTDP1Q9Y5B0 961 aaPredicted RBP11.43□□□□□ -0.58
SRRT-208ENST00000469602 TAF6LQ9Y6J9 622 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 SMCHD1A6NHR9 2005 aa11.43□□□□□ -0.58
SRRT-208ENST00000469602 FRMPD2Q68DX3 1309 aaPredicted RBP11.42□□□□□ -0.58
SRRT-208ENST00000469602 GJB1P08034 283 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 SNHG28P0DPA3 235 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 ZNF543Q08ER8 600 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 CCL14Q16627 93 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 STOX1Q6ZVD7 989 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 CYB5R4Q7L1T6 521 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 RALYLQ86SE5 291 aaKnown RBP11.42□□□□□ -0.58
SRRT-208ENST00000469602 DPP9Q86TI2 863 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 CPXCR1Q8N123 301 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 PNMA1Q8ND90 353 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 NCOA7Q8NI08 942 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 RNF208Q9H0X6 261 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 UNC93B1Q9H1C4 597 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 KAT14Q9H8E8 782 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 PRR12Q9ULL5 1215 aa11.42□□□□□ -0.58
SRRT-208ENST00000469602 MYH6P13533 1939 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 CEP290O15078 2479 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 EN2P19622 333 aaPredicted RBP11.41□□□□□ -0.58
SRRT-208ENST00000469602 MLLT1Q03111 559 aaPredicted RBP11.41□□□□□ -0.58
SRRT-208ENST00000469602 TRIM32Q13049 653 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 KCTD2Q14681 263 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 SEC23AQ15436 765 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 IFIT1BQ5T764 474 aaKnown RBP11.41□□□□□ -0.58
SRRT-208ENST00000469602 TTBK2Q6IQ55 1244 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 BTNL9Q6UXG8 535 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 NPLOC4Q8TAT6 608 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 MMP19Q99542 508 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 RAVER2Q9HCJ3 691 aaKnown RBP11.41□□□□□ -0.58
SRRT-208ENST00000469602 GPCPD1Q9NPB8 672 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 PAK6Q9NQU5 681 aaPredicted RBP11.41□□□□□ -0.58
SRRT-208ENST00000469602 SLC5A4Q9NY91 659 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 FLRT1Q9NZU1 646 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 RIPK3Q9Y572 518 aa11.41□□□□□ -0.58
SRRT-208ENST00000469602 ZNF536O15090 1300 aa11.4□□□□□ -0.58
SRRT-208ENST00000469602 RPTORQ8N122 1335 aa11.4□□□□□ -0.58
SRRT-208ENST00000469602 SLC27A2O14975 620 aa11.4□□□□□ -0.58
SRRT-208ENST00000469602 COBLO75128 1261 aa11.4□□□□□ -0.58
SRRT-208ENST00000469602 PRKAR2AP13861 404 aaKnown RBP11.4□□□□□ -0.58
SRRT-208ENST00000469602 SLC16A2P36021 539 aa11.4□□□□□ -0.58
SRRT-208ENST00000469602 GJA8P48165 433 aa11.4□□□□□ -0.58
SRRT-208ENST00000469602 SLC4A3P48751 1232 aa11.4□□□□□ -0.58
SRRT-208ENST00000469602 SART3Q15020 963 aaKnown RBP11.4□□□□□ -0.58
SRRT-208ENST00000469602 NECTIN1Q15223 517 aa11.4□□□□□ -0.58
SRRT-208ENST00000469602 GPATCH4Q5T3I0 446 aaKnown RBP11.4□□□□□ -0.58
SRRT-208ENST00000469602 MAP3K21Q5TCX8 1036 aa11.4□□□□□ -0.58
SRRT-208ENST00000469602 SYDE2Q5VT97 1194 aa11.4□□□□□ -0.58
SRRT-208ENST00000469602 CREB3L3Q68CJ9 461 aa11.4□□□□□ -0.58
SRRT-208ENST00000469602 MB21D2Q8IYB1 491 aaPredicted RBP11.4□□□□□ -0.58
SRRT-208ENST00000469602 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.4□□□□□ -0.58
SRRT-208ENST00000469602 RANBP17Q9H2T7 1088 aaKnown RBP11.4□□□□□ -0.58
SRRT-208ENST00000469602 HMX1Q9NP08 348 aaPredicted RBP11.4□□□□□ -0.58
SRRT-208ENST00000469602 FRMPD3Q5JV73 1810 aa11.39□□□□□ -0.59
SRRT-208ENST00000469602 ERICH2A1L162 156 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms