RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 RNF113AO15541 343 aaKnown RBP12.33□□□□□ -0.44
SFXN3-204ENST00000466982 MATR3P43243 847 aaKnown RBP eCLIP12.33□□□□□ -0.44
SFXN3-204ENST00000466982 HERVK_113P62684 666 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 KRT31Q15323 416 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 CCDC122Q5T0U0 273 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 LMBR1Q8WVP7 490 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 LRRC1Q9BTT6 524 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 BATF3Q9NR55 127 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 TAB2Q9NYJ8 693 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 FAM184BQ9ULE4 1060 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 RANBP6O60518 1105 aaKnown RBP12.33□□□□□ -0.44
SFXN3-204ENST00000466982 METAP2P50579 478 aaKnown RBP eCLIP12.33□□□□□ -0.44
SFXN3-204ENST00000466982 IMMTQ16891 758 aaKnown RBP12.33□□□□□ -0.44
SFXN3-204ENST00000466982 WASHC4Q2M389 1173 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 ZNF530Q6P9A1 599 aaPredicted RBP12.33□□□□□ -0.44
SFXN3-204ENST00000466982 B4GALNT4Q76KP1 1039 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 SDR16C5Q8N3Y7 309 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 KCNJ14Q9UNX9 436 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 PCDHB6Q9Y5E3 794 aa12.33□□□□□ -0.44
SFXN3-204ENST00000466982 DDX58O95786 925 aaKnown RBP12.32□□□□□ -0.44
SFXN3-204ENST00000466982 RANBP1P43487 201 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 IFT88Q13099 833 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 SF3B2Q13435 895 aaKnown RBP12.32□□□□□ -0.44
SFXN3-204ENST00000466982 CCDC40Q4G0X9 1142 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 THEMIS2Q5TEJ8 643 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 NAA35Q5VZE5 725 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 PAPD7Q5XG87 772 aaKnown RBP12.32□□□□□ -0.44
SFXN3-204ENST00000466982 RALYLQ86SE5 291 aaKnown RBP12.32□□□□□ -0.44
SFXN3-204ENST00000466982 TRIM42Q8IWZ5 723 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 CCDC13Q8IYE1 715 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 B4GALNT2Q8NHY0 566 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 RNPC3Q96LT9 517 aaKnown RBP12.32□□□□□ -0.44
SFXN3-204ENST00000466982 TSGA10Q9BZW7 698 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 LACRTQ9GZZ8 138 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 ATP6V0A4Q9HBG4 840 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 SMARCAL1Q9NZC9 954 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.32□□□□□ -0.44
SFXN3-204ENST00000466982 STRCP1A6NGW2 1772 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 PTCD1O75127 700 aaKnown RBP12.32□□□□□ -0.44
SFXN3-204ENST00000466982 PTPREP23469 700 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 GUCY1A2P33402 732 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 FKBP4Q02790 459 aaKnown RBP eCLIP12.32□□□□□ -0.44
SFXN3-204ENST00000466982 SPRED3Q2MJR0 410 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 CEP85LQ5SZL2 805 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 FAM228AQ86W67 206 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 DZIP3Q86Y13 1208 aaKnown RBP12.32□□□□□ -0.44
SFXN3-204ENST00000466982 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 CCDC51Q96ER9 411 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 IQCGQ9H095 443 aaKnown RBP12.32□□□□□ -0.44
SFXN3-204ENST00000466982 CSRNP2Q9H175 543 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 JADE2Q9NQC1 790 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 ANKARQ7Z5J8 1434 aa12.32□□□□□ -0.44
SFXN3-204ENST00000466982 PPP1R3GB7ZBB8 358 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 GOLGA8KD6RF30 607 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 RASSF9O75901 435 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 MYL1P05976 194 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 EZRP15311 586 aaKnown RBP12.31□□□□□ -0.44
SFXN3-204ENST00000466982 LSP1P33241 339 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 E2F5Q15329 346 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 TTLL7Q6ZT98 887 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 CYB5R4Q7L1T6 521 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 COPS6Q7L5N1 327 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 TRIML1Q8N9V2 468 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 XAGE3Q8WTP9 111 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 EPSTI1Q96J88 318 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 SLC40A1Q9NP59 571 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 CTNND2Q9UQB3 1225 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 ATXN2Q99700 1313 aaKnown RBP12.31□□□□□ -0.44
SFXN3-204ENST00000466982 ATF3P18847 181 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 SKOR1P84550 965 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 HDLBPQ00341 1268 aaKnown RBP12.31□□□□□ -0.44
SFXN3-204ENST00000466982 NEXNQ0ZGT2 675 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 LRRC59Q96AG4 307 aaKnown RBP12.31□□□□□ -0.44
SFXN3-204ENST00000466982 BICD1Q96G01 975 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 PSMB7Q99436 277 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 TMEM165Q9HC07 324 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 DDX21Q9NR30 783 aaKnown RBP eCLIP12.31□□□□□ -0.44
SFXN3-204ENST00000466982 EHD2Q9NZN4 543 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 UBN2Q6ZU65 1347 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 MED1Q15648 1581 aaPredicted RBP12.31□□□□□ -0.44
SFXN3-204ENST00000466982 NWD2Q9ULI1 1742 aa12.31□□□□□ -0.44
SFXN3-204ENST00000466982 TTC26A0AVF1 554 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 IFIT1P09914 478 aaKnown RBP12.3□□□□□ -0.44
SFXN3-204ENST00000466982 NR5A1Q13285 461 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 NNTQ13423 1086 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 ESCO1Q5FWF5 840 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 NOSTRINQ8IVI9 506 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 ZIM3Q96PE6 472 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 CTAGE1Q96RT6 745 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 TSPYL2Q9H2G4 693 aaPredicted RBP12.3□□□□□ -0.44
SFXN3-204ENST00000466982 VCPKMTQ9H867 229 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 INCENPQ9NQS7 918 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 RGL1Q9NZL6 768 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 KDM3BQ7LBC6 1761 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 MACROD2A1Z1Q3 448 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 AHCYL1O43865 530 aa12.3□□□□□ -0.44
SFXN3-204ENST00000466982 FESP07332 822 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms