RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 TMEM67Q5HYA8 995 aa18.44■□□□□ 0.54
NCSTN-210ENST00000465223 SPICE1Q8N0Z3 855 aa18.44■□□□□ 0.54
NCSTN-210ENST00000465223 MIGA1Q8NAN2 632 aa18.44■□□□□ 0.54
NCSTN-210ENST00000465223 PCSK9Q8NBP7 692 aaKnown RBP18.44■□□□□ 0.54
NCSTN-210ENST00000465223 ARNTL2Q8WYA1 636 aa18.44■□□□□ 0.54
NCSTN-210ENST00000465223 VWCEQ96DN2 955 aa18.44■□□□□ 0.54
NCSTN-210ENST00000465223 WNT8AQ9H1J5 351 aa18.44■□□□□ 0.54
NCSTN-210ENST00000465223 TRANK1O15050 2925 aa18.44■□□□□ 0.54
NCSTN-210ENST00000465223 MCM3APO60318 1980 aa18.43■□□□□ 0.54
NCSTN-210ENST00000465223 MPHOSPH10O00566 681 aaKnown RBP18.43■□□□□ 0.54
NCSTN-210ENST00000465223 COL4A4P53420 1690 aaPredicted RBP18.43■□□□□ 0.54
NCSTN-210ENST00000465223 CYP7A1P22680 504 aa18.42■□□□□ 0.54
NCSTN-210ENST00000465223 EVX2Q03828 476 aa18.42■□□□□ 0.54
NCSTN-210ENST00000465223 GNASQ5JWF2 1037 aa18.42■□□□□ 0.54
NCSTN-210ENST00000465223 TTC6Q86TZ1 520 aa18.42■□□□□ 0.54
NCSTN-210ENST00000465223 RIOX2Q8IUF8 465 aa18.42■□□□□ 0.54
NCSTN-210ENST00000465223 GJD3Q8N144 294 aa18.42■□□□□ 0.54
NCSTN-210ENST00000465223 SCLYQ96I15 445 aa18.42■□□□□ 0.54
NCSTN-210ENST00000465223 PIH1D3Q9NQM4 214 aaKnown RBP18.42■□□□□ 0.54
NCSTN-210ENST00000465223 SRGAP3O43295 1099 aa18.41■□□□□ 0.54
NCSTN-210ENST00000465223 GJA9P57773 515 aa18.41■□□□□ 0.54
NCSTN-210ENST00000465223 GRB10Q13322 594 aa18.41■□□□□ 0.54
NCSTN-210ENST00000465223 TTLL4Q14679 1199 aa18.41■□□□□ 0.54
NCSTN-210ENST00000465223 CSPP1Q1MSJ5 1256 aa18.41■□□□□ 0.54
NCSTN-210ENST00000465223 SPRED2Q7Z698 418 aa18.41■□□□□ 0.54
NCSTN-210ENST00000465223 CLEC10AQ8IUN9 316 aa18.41■□□□□ 0.54
NCSTN-210ENST00000465223 ANKS1AQ92625 1134 aa18.41■□□□□ 0.54
NCSTN-210ENST00000465223 PHOX2BQ99453 314 aa18.41■□□□□ 0.54
NCSTN-210ENST00000465223 MEIS3Q99687 375 aa18.41■□□□□ 0.54
NCSTN-210ENST00000465223 NOC4LQ9BVI4 516 aaKnown RBP18.41■□□□□ 0.54
NCSTN-210ENST00000465223 UPF3AQ9H1J1 476 aaKnown RBP18.41■□□□□ 0.54
NCSTN-210ENST00000465223 SCN5AQ14524 2016 aa18.4■□□□□ 0.54
NCSTN-210ENST00000465223 CTAGE5O15320 804 aa18.4■□□□□ 0.54
NCSTN-210ENST00000465223 BEX3Q00994 111 aa18.4■□□□□ 0.54
NCSTN-210ENST00000465223 TAP1Q03518 808 aa18.4■□□□□ 0.54
NCSTN-210ENST00000465223 TTC39AQ5SRH9 613 aa18.4■□□□□ 0.54
NCSTN-210ENST00000465223 FAM178BQ8IXR5 827 aa18.4■□□□□ 0.54
NCSTN-210ENST00000465223 RPUSD2Q8IZ73 545 aaKnown RBP18.4■□□□□ 0.54
NCSTN-210ENST00000465223 SPC25Q9HBM1 224 aa18.4■□□□□ 0.54
NCSTN-210ENST00000465223 FBXO28Q9NVF7 368 aa18.4■□□□□ 0.54
NCSTN-210ENST00000465223 LPXNO60711 386 aa18.39■□□□□ 0.53
NCSTN-210ENST00000465223 SSTR3P32745 418 aaPredicted RBP18.39■□□□□ 0.53
NCSTN-210ENST00000465223 STAT3P40763 770 aa18.39■□□□□ 0.53
NCSTN-210ENST00000465223 ZAP70P43403 619 aa18.39■□□□□ 0.53
NCSTN-210ENST00000465223 ACVR2BQ13705 512 aa18.39■□□□□ 0.53
NCSTN-210ENST00000465223 SLC43A3Q8NBI5 491 aa18.39■□□□□ 0.53
NCSTN-210ENST00000465223 TRPV6Q9H1D0 765 aa18.39■□□□□ 0.53
NCSTN-210ENST00000465223 ADAMTS5Q9UNA0 930 aa18.39■□□□□ 0.53
NCSTN-210ENST00000465223 NAV1Q8NEY1 1877 aa18.39■□□□□ 0.53
NCSTN-210ENST00000465223 BRWD1Q9NSI6 2320 aa18.38■□□□□ 0.53
NCSTN-210ENST00000465223 GABPAQ06546 454 aa18.38■□□□□ 0.53
NCSTN-210ENST00000465223 CCDC144BQ3MJ40 725 aa18.38■□□□□ 0.53
NCSTN-210ENST00000465223 CXCL17Q6UXB2 119 aa18.38■□□□□ 0.53
NCSTN-210ENST00000465223 SIAH1Q8IUQ4 282 aa18.38■□□□□ 0.53
NCSTN-210ENST00000465223 MSL3Q8N5Y2 521 aaKnown RBP18.38■□□□□ 0.53
NCSTN-210ENST00000465223 B4GALT4O60513 344 aa18.37■□□□□ 0.53
NCSTN-210ENST00000465223 ALADP13716 330 aa18.37■□□□□ 0.53
NCSTN-210ENST00000465223 IL9P15248 144 aa18.37■□□□□ 0.53
NCSTN-210ENST00000465223 MAMDC4Q6UXC1 1216 aa18.37■□□□□ 0.53
NCSTN-210ENST00000465223 AGBL1Q96MI9 1066 aa18.37■□□□□ 0.53
NCSTN-210ENST00000465223 DBNDD2Q9BQY9 259 aa18.37■□□□□ 0.53
NCSTN-210ENST00000465223 KCNH6Q9H252 994 aa18.37■□□□□ 0.53
NCSTN-210ENST00000465223 VCPKMTQ9H867 229 aa18.37■□□□□ 0.53
NCSTN-210ENST00000465223 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.37■□□□□ 0.53
NCSTN-210ENST00000465223 ZNF214Q9UL59 606 aaPredicted RBP18.37■□□□□ 0.53
NCSTN-210ENST00000465223 GRIN2DO15399 1336 aa18.37■□□□□ 0.53
NCSTN-210ENST00000465223 VWA5AO00534 786 aa18.36■□□□□ 0.53
NCSTN-210ENST00000465223 WDR46O15213 610 aaKnown RBP18.36■□□□□ 0.53
NCSTN-210ENST00000465223 POLR3DP05423 398 aaPredicted RBP18.36■□□□□ 0.53
NCSTN-210ENST00000465223 MYH8P13535 1937 aa18.36■□□□□ 0.53
NCSTN-210ENST00000465223 ITGA7Q13683 1181 aa18.36■□□□□ 0.53
NCSTN-210ENST00000465223 DEFB128Q7Z7B8 93 aa18.36■□□□□ 0.53
NCSTN-210ENST00000465223 REPS2Q8NFH8 660 aa18.36■□□□□ 0.53
NCSTN-210ENST00000465223 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.36■□□□□ 0.53
NCSTN-210ENST00000465223 HDAC5Q9UQL6 1122 aa18.36■□□□□ 0.53
NCSTN-210ENST00000465223 TMX2Q9Y320 296 aa18.36■□□□□ 0.53
NCSTN-210ENST00000465223 MAGEB6Q8N7X4 407 aa18.35■□□□□ 0.53
NCSTN-210ENST00000465223 DDX11Q96FC9 970 aa18.35■□□□□ 0.53
NCSTN-210ENST00000465223 UBE2ZQ9H832 354 aaPredicted RBP18.35■□□□□ 0.53
NCSTN-210ENST00000465223 ASTN1O14525 1302 aa18.34■□□□□ 0.53
NCSTN-210ENST00000465223 PTPRSQ13332 1948 aa18.34■□□□□ 0.53
NCSTN-210ENST00000465223 DNAJC25-GNG10A0A024R161 153 aa18.34■□□□□ 0.53
NCSTN-210ENST00000465223 IDH1O75874 414 aaKnown RBP18.34■□□□□ 0.53
NCSTN-210ENST00000465223 PTGS1P23219 599 aa18.34■□□□□ 0.53
NCSTN-210ENST00000465223 CCDC158Q5M9N0 1113 aa18.34■□□□□ 0.53
NCSTN-210ENST00000465223 TMEM179Q6ZVK1 233 aa18.34■□□□□ 0.53
NCSTN-210ENST00000465223 GDPD5Q8WTR4 605 aa18.34■□□□□ 0.53
NCSTN-210ENST00000465223 ARHGEF10LQ9HCE6 1279 aa18.34■□□□□ 0.53
NCSTN-210ENST00000465223 MRS2Q9HD23 443 aa18.34■□□□□ 0.53
NCSTN-210ENST00000465223 RIPK3Q9Y572 518 aa18.34■□□□□ 0.53
NCSTN-210ENST00000465223 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.33■□□□□ 0.52
NCSTN-210ENST00000465223 PSMC6P62333 389 aa18.33■□□□□ 0.52
NCSTN-210ENST00000465223 ICA1Q05084 483 aa18.33■□□□□ 0.52
NCSTN-210ENST00000465223 G3BP1Q13283 466 aaKnown RBP eCLIP18.33■□□□□ 0.52
NCSTN-210ENST00000465223 MTX1Q13505 466 aa18.33■□□□□ 0.52
NCSTN-210ENST00000465223 FGD4Q96M96 766 aa18.33■□□□□ 0.52
NCSTN-210ENST00000465223 SLC9A7Q96T83 725 aa18.33■□□□□ 0.52
NCSTN-210ENST00000465223 ABHD16BQ9H3Z7 469 aa18.33■□□□□ 0.52
NCSTN-210ENST00000465223 PPP1R9AQ9ULJ8 1098 aa18.33■□□□□ 0.52
NCSTN-210ENST00000465223 ZNF318Q5VUA4 2279 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms