RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SENP6Q9GZR1 1112 aaPredicted RBP20.53■□□□□ 0.88
CPSF4-209ENST00000465132 ARHGEF10LQ9HCE6 1279 aa20.53■□□□□ 0.88
CPSF4-209ENST00000465132 TOMM22Q9NS69 142 aa20.53■□□□□ 0.88
CPSF4-209ENST00000465132 CYBAP13498 195 aa20.52■□□□□ 0.88
CPSF4-209ENST00000465132 ERCC3P19447 782 aa20.52■□□□□ 0.88
CPSF4-209ENST00000465132 DSG3P32926 999 aa20.52■□□□□ 0.88
CPSF4-209ENST00000465132 ICA1Q05084 483 aa20.52■□□□□ 0.88
CPSF4-209ENST00000465132 NECTIN1Q15223 517 aa20.52■□□□□ 0.88
CPSF4-209ENST00000465132 OLFML2BQ68BL8 750 aa20.52■□□□□ 0.88
CPSF4-209ENST00000465132 USP26Q9BXU7 913 aa20.52■□□□□ 0.88
CPSF4-209ENST00000465132 TMX2Q9Y320 296 aa20.52■□□□□ 0.88
CPSF4-209ENST00000465132 CYP2D7A0A087X1C5 515 aa20.51■□□□□ 0.87
CPSF4-209ENST00000465132 SMIM22K7EJ46 135 aa20.51■□□□□ 0.87
CPSF4-209ENST00000465132 FLOT1O75955 427 aa20.51■□□□□ 0.87
CPSF4-209ENST00000465132 HMGB1P09429 215 aaKnown RBP20.51■□□□□ 0.87
CPSF4-209ENST00000465132 FGRP09769 529 aa20.51■□□□□ 0.87
CPSF4-209ENST00000465132 HSPA4P34932 840 aa20.51■□□□□ 0.87
CPSF4-209ENST00000465132 HAND2P61296 217 aa20.51■□□□□ 0.87
CPSF4-209ENST00000465132 CTDSPL2Q05D32 466 aa20.51■□□□□ 0.87
CPSF4-209ENST00000465132 CREB3L3Q68CJ9 461 aa20.51■□□□□ 0.87
CPSF4-209ENST00000465132 SPICE1Q8N0Z3 855 aa20.51■□□□□ 0.87
CPSF4-209ENST00000465132 SH2D4AQ9H788 454 aa20.51■□□□□ 0.87
CPSF4-209ENST00000465132 VCPKMTQ9H867 229 aa20.51■□□□□ 0.87
CPSF4-209ENST00000465132 FRMPD3Q5JV73 1810 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 ZNF236Q9UL36 1845 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 A0A0G2JMZ2 1700 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 DNM1LO00429 736 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 SLC27A2O14975 620 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 COBLO75128 1261 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 CYP21A2P08686 494 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 TSPY3P0CV98 308 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 TSPY8P0CW00 308 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 PSMA5P28066 241 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 MDM2Q00987 491 aaPredicted RBP20.5■□□□□ 0.87
CPSF4-209ENST00000465132 TSGA10IPQ3SY00 556 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 SLC17A8Q8NDX2 589 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 IL27Q8NEV9 243 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 NCOA7Q8NI08 942 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 ATG4CQ96DT6 458 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 MROH8Q9H579 483 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 RLFQ13129 1914 aa20.5■□□□□ 0.87
CPSF4-209ENST00000465132 TSPY2A6NKD2 308 aa20.49■□□□□ 0.87
CPSF4-209ENST00000465132 ANAPC15P60006 121 aa20.49■□□□□ 0.87
CPSF4-209ENST00000465132 PLS1Q14651 629 aa20.49■□□□□ 0.87
CPSF4-209ENST00000465132 IQCA1Q86XH1 822 aa20.49■□□□□ 0.87
CPSF4-209ENST00000465132 ABRAQ8N0Z2 381 aa20.49■□□□□ 0.87
CPSF4-209ENST00000465132 DEFB123Q8N688 67 aa20.49■□□□□ 0.87
CPSF4-209ENST00000465132 WDR46O15213 610 aaKnown RBP20.48■□□□□ 0.87
CPSF4-209ENST00000465132 RANBP6O60518 1105 aaKnown RBP20.48■□□□□ 0.87
CPSF4-209ENST00000465132 ATN1P54259 1190 aaPredicted RBP20.48■□□□□ 0.87
CPSF4-209ENST00000465132 SART3Q15020 963 aaKnown RBP20.48■□□□□ 0.87
CPSF4-209ENST00000465132 Q7L0L9 218 aa20.48■□□□□ 0.87
CPSF4-209ENST00000465132 NCAPG2Q86XI2 1143 aa20.48■□□□□ 0.87
CPSF4-209ENST00000465132 BACH2Q9BYV9 841 aa20.48■□□□□ 0.87
CPSF4-209ENST00000465132 SLC5A4Q9NY91 659 aa20.48■□□□□ 0.87
CPSF4-209ENST00000465132 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.48■□□□□ 0.87
CPSF4-209ENST00000465132 E7EWF7 191 aa20.47■□□□□ 0.87
CPSF4-209ENST00000465132 SEPT4O43236 478 aa20.47■□□□□ 0.87
CPSF4-209ENST00000465132 RRP12Q5JTH9 1297 aaKnown RBP20.47■□□□□ 0.87
CPSF4-209ENST00000465132 GJC2Q5T442 439 aaPredicted RBP20.47■□□□□ 0.87
CPSF4-209ENST00000465132 SAMD1Q6SPF0 538 aaPredicted RBP20.47■□□□□ 0.87
CPSF4-209ENST00000465132 ARRDC4Q8NCT1 418 aa20.47■□□□□ 0.87
CPSF4-209ENST00000465132 MTA3Q9BTC8 594 aa20.47■□□□□ 0.87
CPSF4-209ENST00000465132 KANSL2Q9H9L4 492 aa20.47■□□□□ 0.87
CPSF4-209ENST00000465132 ERICH2A1L162 156 aa20.46■□□□□ 0.87
CPSF4-209ENST00000465132 EEF2P13639 858 aaKnown RBP20.46■□□□□ 0.87
CPSF4-209ENST00000465132 RASA1P20936 1047 aa20.46■□□□□ 0.87
CPSF4-209ENST00000465132 RTP1P59025 263 aa20.46■□□□□ 0.87
CPSF4-209ENST00000465132 TMEM132BQ14DG7 1078 aa20.46■□□□□ 0.87
CPSF4-209ENST00000465132 STK11IPQ8N1F8 1099 aa20.46■□□□□ 0.87
CPSF4-209ENST00000465132 NEDD1Q8NHV4 660 aa20.46■□□□□ 0.87
CPSF4-209ENST00000465132 KCNB2Q92953 911 aa20.46■□□□□ 0.87
CPSF4-209ENST00000465132 ADAMTS5Q9UNA0 930 aa20.46■□□□□ 0.87
CPSF4-209ENST00000465132 PRDM1O75626 825 aa20.45■□□□□ 0.86
CPSF4-209ENST00000465132 SLC25A27O95847 323 aa20.45■□□□□ 0.86
CPSF4-209ENST00000465132 FCER1AP12319 257 aa20.45■□□□□ 0.86
CPSF4-209ENST00000465132 TFAP4Q01664 338 aa20.45■□□□□ 0.86
CPSF4-209ENST00000465132 PRAMEF19Q5SWL8 479 aa20.45■□□□□ 0.86
CPSF4-209ENST00000465132 ANO1Q5XXA6 986 aa20.45■□□□□ 0.86
CPSF4-209ENST00000465132 TBC1D10CQ8IV04 446 aa20.45■□□□□ 0.86
CPSF4-209ENST00000465132 MAML3Q96JK9 1138 aa20.45■□□□□ 0.86
CPSF4-209ENST00000465132 LBHD1Q9BQE6 289 aaPredicted RBP20.45■□□□□ 0.86
CPSF4-209ENST00000465132 UBAC1Q9BSL1 405 aa20.45■□□□□ 0.86
CPSF4-209ENST00000465132 SYNPO2Q9UMS6 1093 aa20.45■□□□□ 0.86
CPSF4-209ENST00000465132 KBTBD13C9JR72 458 aa20.44■□□□□ 0.86
CPSF4-209ENST00000465132 MCM5P33992 734 aa20.44■□□□□ 0.86
CPSF4-209ENST00000465132 NEK1Q96PY6 1258 aa20.44■□□□□ 0.86
CPSF4-209ENST00000465132 TCP11L1Q9NUJ3 509 aa20.44■□□□□ 0.86
CPSF4-209ENST00000465132 FBXO28Q9NVF7 368 aa20.44■□□□□ 0.86
CPSF4-209ENST00000465132 MTMR10Q9NXD2 777 aa20.44■□□□□ 0.86
CPSF4-209ENST00000465132 PLIN4Q96Q06 1357 aa20.44■□□□□ 0.86
CPSF4-209ENST00000465132 KDM4AO75164 1064 aa20.43■□□□□ 0.86
CPSF4-209ENST00000465132 SLC39A5Q6ZMH5 540 aa20.43■□□□□ 0.86
CPSF4-209ENST00000465132 TTC14Q96N46 770 aa20.43■□□□□ 0.86
CPSF4-209ENST00000465132 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.43■□□□□ 0.86
CPSF4-209ENST00000465132 C22orf23Q9BZE7 217 aa20.43■□□□□ 0.86
CPSF4-209ENST00000465132 TM6SF1Q9BZW5 370 aa20.43■□□□□ 0.86
CPSF4-209ENST00000465132 GOPCQ9HD26 462 aa20.43■□□□□ 0.86
CPSF4-209ENST00000465132 PRKAG2Q9UGJ0 569 aa20.43■□□□□ 0.86
CPSF4-209ENST00000465132 ATP11BQ9Y2G3 1177 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms