RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 TMEM132BQ14DG7 1078 aa11.21□□□□□ -0.61
COL6A2-207ENST00000460886 ARRDC4Q8NCT1 418 aa11.21□□□□□ -0.61
COL6A2-207ENST00000460886 MAML3Q96JK9 1138 aa11.21□□□□□ -0.61
COL6A2-207ENST00000460886 DSCC1Q9BVC3 393 aa11.21□□□□□ -0.61
COL6A2-207ENST00000460886 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.21□□□□□ -0.61
COL6A2-207ENST00000460886 MKNK2Q9HBH9 465 aa11.21□□□□□ -0.61
COL6A2-207ENST00000460886 MTMR10Q9NXD2 777 aa11.21□□□□□ -0.61
COL6A2-207ENST00000460886 STXBP5LQ9Y2K9 1186 aa11.21□□□□□ -0.61
COL6A2-207ENST00000460886 SMCHD1A6NHR9 2005 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 POTEB2H3BUK9 544 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 CDC45O75419 566 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 PRDM1O75626 825 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 FCER1AP12319 257 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 EEF2P13639 858 aaKnown RBP11.2□□□□□ -0.62
COL6A2-207ENST00000460886 RASA1P20936 1047 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 CNGA1P29973 690 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 HAND2P61296 217 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 PDE4BQ07343 736 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 FAM109BQ6ICB4 259 aaPredicted RBP11.2□□□□□ -0.62
COL6A2-207ENST00000460886 CASC1Q6TDU7 716 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 RIOX2Q8IUF8 465 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 ZNF444Q8N0Y2 327 aaPredicted RBP11.2□□□□□ -0.62
COL6A2-207ENST00000460886 SPICE1Q8N0Z3 855 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 DEFB123Q8N688 67 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 REPS2Q8NFH8 660 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 ESYT1Q9BSJ8 1104 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 ZNF287Q9HBT7 754 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 INCENPQ9NQS7 918 aa11.2□□□□□ -0.62
COL6A2-207ENST00000460886 ZNF214Q9UL59 606 aaPredicted RBP11.2□□□□□ -0.62
COL6A2-207ENST00000460886 DIS3Q9Y2L1 958 aaKnown RBP11.2□□□□□ -0.62
COL6A2-207ENST00000460886 ZMYM6O95789 1325 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 VWA5AO00534 786 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 COPB2P35606 906 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 RTP1P59025 263 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 MDM2Q00987 491 aaPredicted RBP11.19□□□□□ -0.62
COL6A2-207ENST00000460886 PTH1RQ03431 593 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 SLC39A5Q6ZMH5 540 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 KIAA1211Q6ZU35 1233 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 Q7L0L9 218 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.19□□□□□ -0.62
COL6A2-207ENST00000460886 NCAPG2Q86XI2 1143 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 SLC17A8Q8NDX2 589 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 GOPCQ9HD26 462 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 FBXO28Q9NVF7 368 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 CTNNA3Q9UI47 895 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 ANAPC4Q9UJX5 808 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 PPP1R9AQ9ULJ8 1098 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 MYH4Q9Y623 1939 aa11.19□□□□□ -0.62
COL6A2-207ENST00000460886 CDH23Q9H251 3354 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 KBTBD13C9JR72 458 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 ZNF213O14771 459 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 ATP2A1O14983 1001 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 ATN1P54259 1190 aaPredicted RBP11.18□□□□□ -0.62
COL6A2-207ENST00000460886 PLS1Q14651 629 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 LRRC41Q15345 812 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 IMMTQ16891 758 aaKnown RBP11.18□□□□□ -0.62
COL6A2-207ENST00000460886 ZNF792Q3KQV3 632 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 GJC2Q5T442 439 aaPredicted RBP11.18□□□□□ -0.62
COL6A2-207ENST00000460886 LBHD1Q9BQE6 289 aaPredicted RBP11.18□□□□□ -0.62
COL6A2-207ENST00000460886 TOMM22Q9NS69 142 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 NYAP2Q9P242 653 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 SYNPO2Q9UMS6 1093 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 PHF24Q9UPV7 400 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 TACC3Q9Y6A5 838 aa11.18□□□□□ -0.62
COL6A2-207ENST00000460886 IGKV6D-41A0A0C4DH26 115 aa11.17□□□□□ -0.62
COL6A2-207ENST00000460886 STAT3P40763 770 aa11.17□□□□□ -0.62
COL6A2-207ENST00000460886 FAM47AQ5JRC9 791 aa11.17□□□□□ -0.62
COL6A2-207ENST00000460886 RRP12Q5JTH9 1297 aaKnown RBP11.17□□□□□ -0.62
COL6A2-207ENST00000460886 AKNAD1Q5T1N1 836 aa11.17□□□□□ -0.62
COL6A2-207ENST00000460886 MFSD6Q6ZSS7 791 aa11.17□□□□□ -0.62
COL6A2-207ENST00000460886 TBC1D10CQ8IV04 446 aa11.17□□□□□ -0.62
COL6A2-207ENST00000460886 MSL3Q8N5Y2 521 aaKnown RBP11.17□□□□□ -0.62
COL6A2-207ENST00000460886 MMP19Q99542 508 aa11.17□□□□□ -0.62
COL6A2-207ENST00000460886 TINF2Q9BSI4 451 aa11.17□□□□□ -0.62
COL6A2-207ENST00000460886 ANO2Q9NQ90 1003 aa11.17□□□□□ -0.62
COL6A2-207ENST00000460886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.17□□□□□ -0.62
COL6A2-207ENST00000460886 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
COL6A2-207ENST00000460886 EYSQ5T1H1 3165 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 DNAJC25-GNG10A0A024R161 153 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 TSPY2A6NKD2 308 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 ORC4O43929 436 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 RANBP6O60518 1105 aaKnown RBP11.16□□□□□ -0.62
COL6A2-207ENST00000460886 FGRP09769 529 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 ZNF865P0CJ78 1059 aaPredicted RBP11.16□□□□□ -0.62
COL6A2-207ENST00000460886 TSPY3P0CV98 308 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 TSPY8P0CW00 308 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 TFAP4Q01664 338 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 KCTD2Q14681 263 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 PRAMEF19Q5SWL8 479 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 FAM83BQ5T0W9 1011 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 ANO1Q5XXA6 986 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 MAMDC4Q6UXC1 1216 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 STAG1Q8WVM7 1258 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 MAP4K1Q92918 833 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 MKL1Q969V6 931 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 TEX13BQ9BXU2 312 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 LSG1Q9H089 658 aaKnown RBP11.16□□□□□ -0.62
COL6A2-207ENST00000460886 RNF41Q9H4P4 317 aaPredicted RBP11.16□□□□□ -0.62
COL6A2-207ENST00000460886 PDLIM7Q9NR12 457 aa11.16□□□□□ -0.62
COL6A2-207ENST00000460886 PRKAG2Q9UGJ0 569 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms