RNA–Protein interactions for RNA: ENST00000460639.2

ATRX-204, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-204ENST00000460639 APBA2Q99767 749 aa6.09□□□□□ -1.43
ATRX-204ENST00000460639 MKRN2Q9H000 416 aaKnown RBP6.09□□□□□ -1.43
ATRX-204ENST00000460639 CCDC113Q9H0I3 377 aa6.09□□□□□ -1.43
ATRX-204ENST00000460639 ACTR10Q9NZ32 417 aa6.09□□□□□ -1.43
ATRX-204ENST00000460639 PRKAG3Q9UGI9 489 aa6.09□□□□□ -1.43
ATRX-204ENST00000460639 PLAGL2Q9UPG8 496 aa6.09□□□□□ -1.43
ATRX-204ENST00000460639 MAPK8IP1Q9UQF2 711 aa6.09□□□□□ -1.43
ATRX-204ENST00000460639 LAS1LQ9Y4W2 734 aaKnown RBP6.09□□□□□ -1.43
ATRX-204ENST00000460639 FAM155AB1AL88 458 aaPredicted RBP6.08□□□□□ -1.44
ATRX-204ENST00000460639 PPP1R12AO14974 1030 aaPredicted RBP6.08□□□□□ -1.44
ATRX-204ENST00000460639 FOSL1P15407 271 aa6.08□□□□□ -1.44
ATRX-204ENST00000460639 CYP7A1P22680 504 aa6.08□□□□□ -1.44
ATRX-204ENST00000460639 PDE6BP35913 854 aa6.08□□□□□ -1.44
ATRX-204ENST00000460639 SNW1Q13573 536 aaKnown RBP6.08□□□□□ -1.44
ATRX-204ENST00000460639 DALRD3Q5D0E6 543 aaKnown RBP6.08□□□□□ -1.44
ATRX-204ENST00000460639 INTS3Q68E01 1043 aaKnown RBP6.08□□□□□ -1.44
ATRX-204ENST00000460639 TMTC2Q8N394 836 aa6.08□□□□□ -1.44
ATRX-204ENST00000460639 MFSD4AQ8N468 514 aa6.08□□□□□ -1.44
ATRX-204ENST00000460639 TAB3Q8N5C8 712 aaPredicted RBP6.08□□□□□ -1.44
ATRX-204ENST00000460639 RNF141Q8WVD5 230 aa6.08□□□□□ -1.44
ATRX-204ENST00000460639 APPBP2Q92624 585 aa6.08□□□□□ -1.44
ATRX-204ENST00000460639 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.08□□□□□ -1.44
ATRX-204ENST00000460639 ST7Q9NRC1 585 aa6.08□□□□□ -1.44
ATRX-204ENST00000460639 GNL3LQ9NVN8 582 aaKnown RBP6.08□□□□□ -1.44
ATRX-204ENST00000460639 CAPN6Q9Y6Q1 641 aa6.08□□□□□ -1.44
ATRX-204ENST00000460639 WASH4PA8MWX3 477 aa6.07□□□□□ -1.44
ATRX-204ENST00000460639 H3BS24 57 aa6.07□□□□□ -1.44
ATRX-204ENST00000460639 CEACAM5P06731 702 aa6.07□□□□□ -1.44
ATRX-204ENST00000460639 TNK2Q07912 1038 aa6.07□□□□□ -1.44
ATRX-204ENST00000460639 NKPD1Q17RQ9 610 aa6.07□□□□□ -1.44
ATRX-204ENST00000460639 GNPTABQ3T906 1256 aa6.07□□□□□ -1.44
ATRX-204ENST00000460639 NBPF12Q5TAG4 269 aaPredicted RBP6.07□□□□□ -1.44
ATRX-204ENST00000460639 DCAF15Q66K64 600 aa6.07□□□□□ -1.44
ATRX-204ENST00000460639 CCAR1Q8IX12 1150 aaKnown RBP6.07□□□□□ -1.44
ATRX-204ENST00000460639 CCDC144CPQ8IYA2 1237 aa6.07□□□□□ -1.44
ATRX-204ENST00000460639 SUCOQ9UBS9 1254 aaKnown RBP6.07□□□□□ -1.44
ATRX-204ENST00000460639 R3HCC1Q9Y3T6 440 aaKnown RBP6.07□□□□□ -1.44
ATRX-204ENST00000460639 IGF2BP3O00425 579 aaKnown RBP eCLIP6.06□□□□□ -1.44
ATRX-204ENST00000460639 TSPAN6O43657 245 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 CD96P40200 585 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 PMS1P54277 932 aaKnown RBP6.06□□□□□ -1.44
ATRX-204ENST00000460639 CASP7P55210 303 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 TNNI3KQ59H18 835 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 AXDND1Q5T1B0 1012 aaPredicted RBP6.06□□□□□ -1.44
ATRX-204ENST00000460639 ZFYVE27Q5T4F4 411 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 C6orf15Q6UXA7 325 aaPredicted RBP6.06□□□□□ -1.44
ATRX-204ENST00000460639 SLC51AQ86UW1 340 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 SPACA3Q8IXA5 215 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 C19orf47Q8N9M1 422 aaKnown RBP6.06□□□□□ -1.44
ATRX-204ENST00000460639 DTWD2Q8NBA8 298 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 VWCEQ96DN2 955 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 HSPA12BQ96MM6 686 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 HOMER2Q9NSB8 354 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 RNF112Q9ULX5 631 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 MINPP1Q9UNW1 487 aa6.06□□□□□ -1.44
ATRX-204ENST00000460639 A0A0U1RQG5 324 aaPredicted RBP6.05□□□□□ -1.44
ATRX-204ENST00000460639 SHISA3A0PJX4 238 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 MEIS1O00470 390 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 COBLO75128 1261 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 ZNF865P0CJ78 1059 aaPredicted RBP6.05□□□□□ -1.44
ATRX-204ENST00000460639 GRIK1P39086 918 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 CCNFP41002 786 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 RNF4P78317 190 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 EXOSC10Q01780 885 aaKnown RBP6.05□□□□□ -1.44
ATRX-204ENST00000460639 BNIP3Q12983 259 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 CPSF6Q16630 551 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATRX-204ENST00000460639 MSMPQ1L6U9 139 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 ZMYM1Q5SVZ6 1142 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 KIAA1211LQ6NV74 962 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 VHLLQ6RSH7 139 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 C16orf86Q6ZW13 317 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 TMC3Q7Z5M5 1100 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 NETO1Q8TDF5 533 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 KLHL6Q8WZ60 621 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 DHRS1Q96LJ7 313 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 ASPNQ9BXN1 380 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 FBXL21Q9UKT6 434 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 ZNF214Q9UL59 606 aaPredicted RBP6.05□□□□□ -1.44
ATRX-204ENST00000460639 ATP8A1Q9Y2Q0 1164 aa6.05□□□□□ -1.44
ATRX-204ENST00000460639 SETD1BQ9UPS6 1966 aaKnown RBP6.05□□□□□ -1.44
ATRX-204ENST00000460639 CCDC85CA6NKD9 419 aa6.04□□□□□ -1.44
ATRX-204ENST00000460639 DDAH1O94760 285 aa6.04□□□□□ -1.44
ATRX-204ENST00000460639 SLC7A5Q01650 507 aa6.04□□□□□ -1.44
ATRX-204ENST00000460639 NBPF9Q3BBW0 867 aa6.04□□□□□ -1.44
ATRX-204ENST00000460639 DDX42Q86XP3 938 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATRX-204ENST00000460639 THNSL2Q86YJ6 484 aa6.04□□□□□ -1.44
ATRX-204ENST00000460639 HOMER1Q86YM7 354 aa6.04□□□□□ -1.44
ATRX-204ENST00000460639 TRIM55Q9BYV6 548 aa6.04□□□□□ -1.44
ATRX-204ENST00000460639 TMX1Q9H3N1 280 aa6.04□□□□□ -1.44
ATRX-204ENST00000460639 ARNT2Q9HBZ2 717 aa6.04□□□□□ -1.44
ATRX-204ENST00000460639 ZSWIM5Q9P217 1185 aa6.04□□□□□ -1.44
ATRX-204ENST00000460639 WASHC2CQ9Y4E1 1318 aa6.03□□□□□ -1.44
ATRX-204ENST00000460639 A0A087X0B3 334 aa6.03□□□□□ -1.44
ATRX-204ENST00000460639 CCDC189A1A4V9 331 aa6.03□□□□□ -1.44
ATRX-204ENST00000460639 SH3BP5O60239 455 aa6.03□□□□□ -1.44
ATRX-204ENST00000460639 GJB6O95452 261 aa6.03□□□□□ -1.44
ATRX-204ENST00000460639 KIR3DL1P43629 444 aa6.03□□□□□ -1.44
ATRX-204ENST00000460639 AUHQ13825 339 aaKnown RBP6.03□□□□□ -1.44
ATRX-204ENST00000460639 DHX8Q14562 1220 aaKnown RBP6.03□□□□□ -1.44
ATRX-204ENST00000460639 IFI16Q16666 785 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms