RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 KLF18A0A0U1RQI7 1052 aa11.3□□□□□ -0.6
EPB41-208ENST00000460378 F5H6K3 240 aa11.3□□□□□ -0.6
EPB41-208ENST00000460378 ERCC3P19447 782 aa11.3□□□□□ -0.6
EPB41-208ENST00000460378 KLRC3Q07444 240 aa11.3□□□□□ -0.6
EPB41-208ENST00000460378 CCDC84Q86UT8 332 aaPredicted RBP11.3□□□□□ -0.6
EPB41-208ENST00000460378 LCORLQ8N3X6 602 aa11.3□□□□□ -0.6
EPB41-208ENST00000460378 WBP1LQ9NX94 342 aa11.3□□□□□ -0.6
EPB41-208ENST00000460378 DBNLQ9UJU6 430 aaKnown RBP11.3□□□□□ -0.6
EPB41-208ENST00000460378 FZD1Q9UP38 647 aa11.3□□□□□ -0.6
EPB41-208ENST00000460378 FLT1P17948 1338 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 FOSP01100 380 aaPredicted RBP11.29□□□□□ -0.6
EPB41-208ENST00000460378 HSPD1P10809 573 aaKnown RBP11.29□□□□□ -0.6
EPB41-208ENST00000460378 PTPRAP18433 802 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 MAP2K5Q13163 448 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 EXOC8Q8IYI6 725 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.29□□□□□ -0.6
EPB41-208ENST00000460378 MRC1P22897 1456 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 ZBTB7BO15156 539 aaPredicted RBP11.29□□□□□ -0.6
EPB41-208ENST00000460378 SORBS3O60504 671 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 USP2O75604 605 aaPredicted RBP11.29□□□□□ -0.6
EPB41-208ENST00000460378 ELNP15502 786 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 NEDD9Q14511 834 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 RNPC3Q96LT9 517 aaKnown RBP11.29□□□□□ -0.6
EPB41-208ENST00000460378 IPO9Q96P70 1041 aaKnown RBP11.29□□□□□ -0.6
EPB41-208ENST00000460378 RIC1Q4ADV7 1423 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 SDSP20132 328 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 LTN1O94822 1766 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 TXNP10599 105 aaKnown RBP11.29□□□□□ -0.6
EPB41-208ENST00000460378 AAK1Q2M2I8 961 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.29□□□□□ -0.6
EPB41-208ENST00000460378 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
EPB41-208ENST00000460378 SHTN1A0MZ66 631 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 DDX39AO00148 427 aaKnown RBP11.28□□□□□ -0.6
EPB41-208ENST00000460378 GH1P01241 217 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 PPIGQ13427 754 aaKnown RBP eCLIP11.28□□□□□ -0.6
EPB41-208ENST00000460378 OTUD6AQ7L8S5 288 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 GZF1Q9H116 711 aaPredicted RBP11.28□□□□□ -0.6
EPB41-208ENST00000460378 TCP11L1Q9NUJ3 509 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 CCDC39Q9UFE4 941 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 DENND3A2RUS2 1198 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 ARID4AP29374 1257 aaPredicted RBP11.28□□□□□ -0.6
EPB41-208ENST00000460378 IFT74Q96LB3 600 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 ZSCAN31Q96LW9 406 aaPredicted RBP11.28□□□□□ -0.6
EPB41-208ENST00000460378 PTCH2Q9Y6C5 1203 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 POLA2Q14181 598 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 LRSAM1Q6UWE0 723 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 P2RX7Q99572 595 aaKnown RBP11.28□□□□□ -0.6
EPB41-208ENST00000460378 PPP1R12CQ9BZL4 782 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 ABCB11O95342 1321 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 KLRF2D3W0D1 207 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 IRS2Q9Y4H2 1338 aa11.28□□□□□ -0.6
EPB41-208ENST00000460378 NEK4P51957 841 aa11.27□□□□□ -0.6
EPB41-208ENST00000460378 LACTBP83111 547 aaPredicted RBP11.27□□□□□ -0.6
EPB41-208ENST00000460378 NFX1Q12986 1120 aaKnown RBP11.27□□□□□ -0.6
EPB41-208ENST00000460378 RPS6KC1Q96S38 1066 aa11.27□□□□□ -0.6
EPB41-208ENST00000460378 PSTPIP2Q9H939 334 aa11.27□□□□□ -0.6
EPB41-208ENST00000460378 LRRC37A3O60309 1634 aa11.27□□□□□ -0.6
EPB41-208ENST00000460378 PPM1FP49593 454 aaPredicted RBP11.27□□□□□ -0.61
EPB41-208ENST00000460378 FAM117BQ6P1L5 589 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 SCFD2Q8WU76 684 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 CALML4Q96GE6 196 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 ZSCAN10Q96SZ4 725 aaPredicted RBP11.27□□□□□ -0.61
EPB41-208ENST00000460378 PIDD1Q9HB75 910 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 KCNG1Q9UIX4 513 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 RPTORQ8N122 1335 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 C4BP0C0L5 1744 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 NFIAQ12857 509 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 RMDN3Q96TC7 470 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 AKT3Q9Y243 479 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 MIS18BP1Q6P0N0 1132 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 IDI2Q9BXS1 227 aa11.27□□□□□ -0.61
EPB41-208ENST00000460378 MSNP26038 577 aaKnown RBP11.26□□□□□ -0.61
EPB41-208ENST00000460378 TPM4P67936 248 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 ATG4CQ96DT6 458 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 SPATC1LQ9H0A9 340 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 TBCAO75347 108 aaKnown RBP11.26□□□□□ -0.61
EPB41-208ENST00000460378 STAG3L1P0CL83 205 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 TTC14Q96N46 770 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 MON2Q7Z3U7 1717 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 CHMP2AO43633 222 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 EIF2AK2P19525 551 aaKnown RBP11.26□□□□□ -0.61
EPB41-208ENST00000460378 FMR1Q06787 632 aaKnown RBP eCLIP11.26□□□□□ -0.61
EPB41-208ENST00000460378 ADPGKQ9BRR6 497 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 DCP1AQ9NPI6 582 aaPredicted RBP11.26□□□□□ -0.61
EPB41-208ENST00000460378 WDR70Q9NW82 654 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 ERLIN2O94905 339 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 PTPROQ16827 1216 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 RAB11FIP4Q86YS3 637 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 INO80BQ9C086 356 aaPredicted RBP11.26□□□□□ -0.61
EPB41-208ENST00000460378 SUGCTQ9HAC7 445 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 NYAP2Q9P242 653 aa11.26□□□□□ -0.61
EPB41-208ENST00000460378 SLC16A2P36021 539 aa11.25□□□□□ -0.61
EPB41-208ENST00000460378 MCM2P49736 904 aa11.25□□□□□ -0.61
EPB41-208ENST00000460378 OTOP1Q7RTM1 612 aa11.25□□□□□ -0.61
EPB41-208ENST00000460378 CCDC117Q8IWD4 279 aaPredicted RBP11.25□□□□□ -0.61
EPB41-208ENST00000460378 ZNF396Q96N95 335 aaPredicted RBP11.25□□□□□ -0.61
EPB41-208ENST00000460378 PPP4CP60510 307 aa11.25□□□□□ -0.61
EPB41-208ENST00000460378 SLC44A5Q8NCS7 719 aa11.25□□□□□ -0.61
EPB41-208ENST00000460378 UBA5Q9GZZ9 404 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms