RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 TOP1P11387 765 aaKnown RBP20.87■□□□□ 0.93
COPS7A-202ENST00000455113 GRB14Q14449 540 aa20.87■□□□□ 0.93
COPS7A-202ENST00000455113 TRIB2Q92519 343 aa20.87■□□□□ 0.93
COPS7A-202ENST00000455113 USP6NLQ92738 828 aa20.87■□□□□ 0.93
COPS7A-202ENST00000455113 NBPF3Q9H094 633 aa20.87■□□□□ 0.93
COPS7A-202ENST00000455113 UNC93B1Q9H1C4 597 aa20.87■□□□□ 0.93
COPS7A-202ENST00000455113 HMX1Q9NP08 348 aaPredicted RBP20.87■□□□□ 0.93
COPS7A-202ENST00000455113 FCER1AP12319 257 aa20.86■□□□□ 0.93
COPS7A-202ENST00000455113 TRDNQ13061 729 aa20.86■□□□□ 0.93
COPS7A-202ENST00000455113 RIOX2Q8IUF8 465 aa20.86■□□□□ 0.93
COPS7A-202ENST00000455113 TEX13BQ9BXU2 312 aa20.86■□□□□ 0.93
COPS7A-202ENST00000455113 U3KPZ7 1027 aaPredicted RBP20.86■□□□□ 0.93
COPS7A-202ENST00000455113 NEDD4P46934 1319 aa20.85■□□□□ 0.93
COPS7A-202ENST00000455113 RPTORQ8N122 1335 aa20.85■□□□□ 0.93
COPS7A-202ENST00000455113 KDM4AO75164 1064 aa20.85■□□□□ 0.93
COPS7A-202ENST00000455113 CAPN2P17655 700 aa20.85■□□□□ 0.93
COPS7A-202ENST00000455113 ADORA2AP29274 412 aa20.85■□□□□ 0.93
COPS7A-202ENST00000455113 GJA8P48165 433 aa20.85■□□□□ 0.93
COPS7A-202ENST00000455113 RCSD1Q6JBY9 416 aa20.85■□□□□ 0.93
COPS7A-202ENST00000455113 ABRAQ8N0Z2 381 aa20.85■□□□□ 0.93
COPS7A-202ENST00000455113 CPXCR1Q8N123 301 aa20.85■□□□□ 0.93
COPS7A-202ENST00000455113 CHMP4CQ96CF2 233 aa20.85■□□□□ 0.93
COPS7A-202ENST00000455113 NOVP48745 357 aa20.84■□□□□ 0.93
COPS7A-202ENST00000455113 SLC4A3P48751 1232 aa20.84■□□□□ 0.93
COPS7A-202ENST00000455113 KCTD2Q14681 263 aa20.84■□□□□ 0.93
COPS7A-202ENST00000455113 CCDC96Q2M329 555 aa20.84■□□□□ 0.93
COPS7A-202ENST00000455113 MFSD14CQ5VZR4 134 aa20.84■□□□□ 0.93
COPS7A-202ENST00000455113 SNRNP48Q6IEG0 339 aaKnown RBP20.84■□□□□ 0.93
COPS7A-202ENST00000455113 U2AF1L4Q8WU68 220 aaKnown RBP20.84■□□□□ 0.93
COPS7A-202ENST00000455113 DCAF4Q8WV16 495 aa20.84■□□□□ 0.93
COPS7A-202ENST00000455113 TMEM47Q9BQJ4 181 aa20.84■□□□□ 0.93
COPS7A-202ENST00000455113 ZNF214Q9UL59 606 aaPredicted RBP20.84■□□□□ 0.93
COPS7A-202ENST00000455113 EIF5BO60841 1220 aaKnown RBP20.84■□□□□ 0.93
COPS7A-202ENST00000455113 KCTD1Q719H9 257 aa20.84■□□□□ 0.93
COPS7A-202ENST00000455113 MMP19Q99542 508 aa20.84■□□□□ 0.93
COPS7A-202ENST00000455113 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.84■□□□□ 0.93
COPS7A-202ENST00000455113 B4E1Z4 1266 aa20.83■□□□□ 0.92
COPS7A-202ENST00000455113 SGPL1O95470 568 aa20.83■□□□□ 0.92
COPS7A-202ENST00000455113 HOXC6P09630 235 aa20.83■□□□□ 0.92
COPS7A-202ENST00000455113 PRKAR2AP13861 404 aaKnown RBP20.83■□□□□ 0.92
COPS7A-202ENST00000455113 DGKHQ86XP1 1220 aa20.83■□□□□ 0.92
COPS7A-202ENST00000455113 DEFB118Q96PH6 123 aa20.83■□□□□ 0.92
COPS7A-202ENST00000455113 ZKSCAN3Q9BRR0 538 aa20.83■□□□□ 0.92
COPS7A-202ENST00000455113 UBAC1Q9BSL1 405 aa20.83■□□□□ 0.92
COPS7A-202ENST00000455113 SLC38A10Q9HBR0 1119 aa20.83■□□□□ 0.92
COPS7A-202ENST00000455113 ATP2A1O14983 1001 aa20.82■□□□□ 0.92
COPS7A-202ENST00000455113 PLA2G6O60733 806 aa20.82■□□□□ 0.92
COPS7A-202ENST00000455113 REC8O95072 547 aa20.82■□□□□ 0.92
COPS7A-202ENST00000455113 TFRCP02786 760 aaKnown RBP20.82■□□□□ 0.92
COPS7A-202ENST00000455113 OAZ1P54368 228 aa20.82■□□□□ 0.92
COPS7A-202ENST00000455113 CCL14Q16627 93 aa20.82■□□□□ 0.92
COPS7A-202ENST00000455113 REPS2Q8NFH8 660 aa20.82■□□□□ 0.92
COPS7A-202ENST00000455113 ANO2Q9NQ90 1003 aa20.82■□□□□ 0.92
COPS7A-202ENST00000455113 PAK6Q9NQU5 681 aaPredicted RBP20.82■□□□□ 0.92
COPS7A-202ENST00000455113 PTH1RQ03431 593 aa20.81■□□□□ 0.92
COPS7A-202ENST00000455113 KAT14Q9H8E8 782 aa20.81■□□□□ 0.92
COPS7A-202ENST00000455113 RAVER2Q9HCJ3 691 aaKnown RBP20.81■□□□□ 0.92
COPS7A-202ENST00000455113 BRCA2P51587 3418 aa20.81■□□□□ 0.92
COPS7A-202ENST00000455113 TRIM32Q13049 653 aa20.81■□□□□ 0.92
COPS7A-202ENST00000455113 RALYLQ86SE5 291 aaKnown RBP20.81■□□□□ 0.92
COPS7A-202ENST00000455113 ZSCAN10Q96SZ4 725 aaPredicted RBP20.81■□□□□ 0.92
COPS7A-202ENST00000455113 ZSWIM5Q9P217 1185 aa20.81■□□□□ 0.92
COPS7A-202ENST00000455113 FBXO40Q9UH90 709 aa20.81■□□□□ 0.92
COPS7A-202ENST00000455113 ZNF236Q9UL36 1845 aa20.8■□□□□ 0.92
COPS7A-202ENST00000455113 CACNB2Q08289 660 aaPredicted RBP20.8■□□□□ 0.92
COPS7A-202ENST00000455113 NPLOC4Q8TAT6 608 aa20.8■□□□□ 0.92
COPS7A-202ENST00000455113 DDX11Q96FC9 970 aa20.8■□□□□ 0.92
COPS7A-202ENST00000455113 MAP3K21Q5TCX8 1036 aa20.79■□□□□ 0.92
COPS7A-202ENST00000455113 MAP4K1Q92918 833 aa20.79■□□□□ 0.92
COPS7A-202ENST00000455113 ZNFX1Q9P2E3 1918 aaKnown RBP20.79■□□□□ 0.92
COPS7A-202ENST00000455113 CYP21A2P08686 494 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 OLFML2BQ68BL8 750 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 CHST13Q8NET6 341 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 LSG1Q9H089 658 aaKnown RBP20.78■□□□□ 0.92
COPS7A-202ENST00000455113 UPF2Q9HAU5 1272 aaKnown RBP20.78■□□□□ 0.92
COPS7A-202ENST00000455113 TNKSO95271 1327 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 ERICH2A1L162 156 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 PDHBP11177 359 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 ANKRD35Q8N283 1001 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 PNMA1Q8ND90 353 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 NCOA7Q8NI08 942 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 SHISA4Q96DD7 197 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 USP26Q9BXU7 913 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 GPCPD1Q9NPB8 672 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 FLRT1Q9NZU1 646 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 PRR12Q9ULL5 1215 aa20.78■□□□□ 0.92
COPS7A-202ENST00000455113 FRMPD2Q68DX3 1309 aaPredicted RBP20.78■□□□□ 0.92
COPS7A-202ENST00000455113 COBLO75128 1261 aa20.77■□□□□ 0.92
COPS7A-202ENST00000455113 CNGA1P29973 690 aa20.77■□□□□ 0.92
COPS7A-202ENST00000455113 SART3Q15020 963 aaKnown RBP20.77■□□□□ 0.92
COPS7A-202ENST00000455113 GPATCH4Q5T3I0 446 aaKnown RBP20.77■□□□□ 0.92
COPS7A-202ENST00000455113 IFIT1BQ5T764 474 aaKnown RBP20.77■□□□□ 0.92
COPS7A-202ENST00000455113 RIPK3Q9Y572 518 aa20.77■□□□□ 0.92
COPS7A-202ENST00000455113 RBM8AQ9Y5S9 174 aaKnown RBP20.77■□□□□ 0.92
COPS7A-202ENST00000455113 CCDC174Q6PII3 467 aa20.76■□□□□ 0.91
COPS7A-202ENST00000455113 MAML3Q96JK9 1138 aa20.76■□□□□ 0.91
COPS7A-202ENST00000455113 HOMER2Q9NSB8 354 aa20.76■□□□□ 0.91
COPS7A-202ENST00000455113 DIS3Q9Y2L1 958 aaKnown RBP20.76■□□□□ 0.91
COPS7A-202ENST00000455113 MSCO60682 206 aa20.75■□□□□ 0.91
COPS7A-202ENST00000455113 FARP2O94887 1054 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms