RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 MYCNP04198 464 aaPredicted RBP21.64■■□□□ 1.05
COL9A1-205ENST00000447041 CTDSPL2Q05D32 466 aa21.64■■□□□ 1.05
COL9A1-205ENST00000447041 CPXCR1Q8N123 301 aa21.64■■□□□ 1.05
COL9A1-205ENST00000447041 ARRDC4Q8NCT1 418 aa21.64■■□□□ 1.05
COL9A1-205ENST00000447041 TINF2Q9BSI4 451 aa21.64■■□□□ 1.05
COL9A1-205ENST00000447041 SYNPO2Q9UMS6 1093 aa21.64■■□□□ 1.05
COL9A1-205ENST00000447041 DIS3Q9Y2L1 958 aaKnown RBP21.64■■□□□ 1.05
COL9A1-205ENST00000447041 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.64■■□□□ 1.05
COL9A1-205ENST00000447041 KBTBD13C9JR72 458 aa21.63■■□□□ 1.05
COL9A1-205ENST00000447041 TAL1P17542 331 aaPredicted RBP21.63■■□□□ 1.05
COL9A1-205ENST00000447041 SLC4A3P48751 1232 aa21.63■■□□□ 1.05
COL9A1-205ENST00000447041 SLFN13Q68D06 897 aa21.63■■□□□ 1.05
COL9A1-205ENST00000447041 SLC38A10Q9HBR0 1119 aa21.63■■□□□ 1.05
COL9A1-205ENST00000447041 RAVER2Q9HCJ3 691 aaKnown RBP21.63■■□□□ 1.05
COL9A1-205ENST00000447041 INCENPQ9NQS7 918 aa21.63■■□□□ 1.05
COL9A1-205ENST00000447041 FEM1BQ9UK73 627 aa21.63■■□□□ 1.05
COL9A1-205ENST00000447041 TACC3Q9Y6A5 838 aa21.63■■□□□ 1.05
COL9A1-205ENST00000447041 LTBP2Q14767 1821 aa21.63■■□□□ 1.05
COL9A1-205ENST00000447041 ATP2A1O14983 1001 aa21.62■■□□□ 1.05
COL9A1-205ENST00000447041 ZBED4O75132 1171 aa21.62■■□□□ 1.05
COL9A1-205ENST00000447041 BMP3P12645 472 aa21.62■■□□□ 1.05
COL9A1-205ENST00000447041 RTP1P59025 263 aa21.62■■□□□ 1.05
COL9A1-205ENST00000447041 MDM2Q00987 491 aaPredicted RBP21.62■■□□□ 1.05
COL9A1-205ENST00000447041 LRRC41Q15345 812 aa21.62■■□□□ 1.05
COL9A1-205ENST00000447041 CHMP4CQ96CF2 233 aa21.62■■□□□ 1.05
COL9A1-205ENST00000447041 UBE2OQ9C0C9 1292 aaKnown RBP21.62■■□□□ 1.05
COL9A1-205ENST00000447041 LNPKQ9C0E8 428 aa21.62■■□□□ 1.05
COL9A1-205ENST00000447041 A0A0D9SFI3 127 aa21.61■■□□□ 1.05
COL9A1-205ENST00000447041 TDHQ8IZJ6 230 aa21.61■■□□□ 1.05
COL9A1-205ENST00000447041 LENG1Q96BZ8 264 aaPredicted RBP21.61■■□□□ 1.05
COL9A1-205ENST00000447041 FAM227BQ96M60 508 aa21.61■■□□□ 1.05
COL9A1-205ENST00000447041 NRBP1Q9UHY1 535 aa21.61■■□□□ 1.05
COL9A1-205ENST00000447041 ISY1Q9ULR0 285 aaKnown RBP21.61■■□□□ 1.05
COL9A1-205ENST00000447041 CTDP1Q9Y5B0 961 aaPredicted RBP21.61■■□□□ 1.05
COL9A1-205ENST00000447041 SMCHD1A6NHR9 2005 aa21.6■■□□□ 1.05
COL9A1-205ENST00000447041 TSPY2A6NKD2 308 aa21.6■■□□□ 1.05
COL9A1-205ENST00000447041 NMT2O60551 498 aa21.6■■□□□ 1.05
COL9A1-205ENST00000447041 ZNF865P0CJ78 1059 aaPredicted RBP21.6■■□□□ 1.05
COL9A1-205ENST00000447041 RASGRP2Q7LDG7 609 aa21.6■■□□□ 1.05
COL9A1-205ENST00000447041 XPNPEP3Q9NQH7 507 aa21.6■■□□□ 1.05
COL9A1-205ENST00000447041 HELLSQ9NRZ9 838 aa21.6■■□□□ 1.05
COL9A1-205ENST00000447041 ATP11BQ9Y2G3 1177 aa21.6■■□□□ 1.05
COL9A1-205ENST00000447041 DNAJC25-GNG10A0A024R161 153 aa21.59■■□□□ 1.05
COL9A1-205ENST00000447041 TMEM232C9JQI7 657 aa21.59■■□□□ 1.05
COL9A1-205ENST00000447041 RARBP10826 455 aa21.59■■□□□ 1.05
COL9A1-205ENST00000447041 ADCYAP1R1P41586 468 aa21.59■■□□□ 1.05
COL9A1-205ENST00000447041 SLC39A5Q6ZMH5 540 aa21.59■■□□□ 1.05
COL9A1-205ENST00000447041 DDX11Q96FC9 970 aa21.59■■□□□ 1.05
COL9A1-205ENST00000447041 IL17RBQ9NRM6 502 aa21.59■■□□□ 1.05
COL9A1-205ENST00000447041 ANAPC4Q9UJX5 808 aa21.59■■□□□ 1.05
COL9A1-205ENST00000447041 STX8Q9UNK0 236 aa21.59■■□□□ 1.05
COL9A1-205ENST00000447041 PGK1P00558 417 aa21.58■■□□□ 1.05
COL9A1-205ENST00000447041 AKR1A1P14550 325 aa21.58■■□□□ 1.05
COL9A1-205ENST00000447041 STAT2P52630 851 aa21.58■■□□□ 1.05
COL9A1-205ENST00000447041 TRIM60Q495X7 471 aa21.58■■□□□ 1.05
COL9A1-205ENST00000447041 B4GALNT3Q6L9W6 998 aa21.58■■□□□ 1.05
COL9A1-205ENST00000447041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.58■■□□□ 1.05
COL9A1-205ENST00000447041 FERMT2Q96AC1 680 aa21.58■■□□□ 1.05
COL9A1-205ENST00000447041 GMCL1Q96IK5 515 aa21.58■■□□□ 1.05
COL9A1-205ENST00000447041 CNPY2Q9Y2B0 182 aa21.58■■□□□ 1.05
COL9A1-205ENST00000447041 SYNGAP1Q96PV0 1343 aa21.57■■□□□ 1.04
COL9A1-205ENST00000447041 RANBP6O60518 1105 aaKnown RBP21.57■■□□□ 1.04
COL9A1-205ENST00000447041 MCCP23508 829 aa21.57■■□□□ 1.04
COL9A1-205ENST00000447041 SLC1A4P43007 532 aa21.57■■□□□ 1.04
COL9A1-205ENST00000447041 OAZ1P54368 228 aa21.57■■□□□ 1.04
COL9A1-205ENST00000447041 NMIQ13287 307 aaPredicted RBP21.57■■□□□ 1.04
COL9A1-205ENST00000447041 SNX17Q15036 470 aa21.57■■□□□ 1.04
COL9A1-205ENST00000447041 MCMDC2Q4G0Z9 681 aa21.57■■□□□ 1.04
COL9A1-205ENST00000447041 ZNF589Q86UQ0 364 aaPredicted RBP21.57■■□□□ 1.04
COL9A1-205ENST00000447041 SMC5Q8IY18 1101 aa21.57■■□□□ 1.04
COL9A1-205ENST00000447041 FGD4Q96M96 766 aa21.57■■□□□ 1.04
COL9A1-205ENST00000447041 HOMER2Q9NSB8 354 aa21.57■■□□□ 1.04
COL9A1-205ENST00000447041 TRIM6-TRIM34B2RNG4 842 aa21.56■■□□□ 1.04
COL9A1-205ENST00000447041 SNAI1O95863 264 aaPredicted RBP21.56■■□□□ 1.04
COL9A1-205ENST00000447041 IKQ13123 557 aaPredicted RBP21.56■■□□□ 1.04
COL9A1-205ENST00000447041 ALX1Q15699 326 aa21.56■■□□□ 1.04
COL9A1-205ENST00000447041 LRIT3Q3SXY7 679 aa21.56■■□□□ 1.04
COL9A1-205ENST00000447041 MAMDC4Q6UXC1 1216 aa21.56■■□□□ 1.04
COL9A1-205ENST00000447041 KCTD1Q719H9 257 aa21.56■■□□□ 1.04
COL9A1-205ENST00000447041 ANKRD35Q8N283 1001 aa21.56■■□□□ 1.04
COL9A1-205ENST00000447041 MSL3Q8N5Y2 521 aaKnown RBP21.56■■□□□ 1.04
COL9A1-205ENST00000447041 CHST13Q8NET6 341 aa21.56■■□□□ 1.04
COL9A1-205ENST00000447041 ZHX1Q9UKY1 873 aaPredicted RBP21.56■■□□□ 1.04
COL9A1-205ENST00000447041 PHF24Q9UPV7 400 aa21.56■■□□□ 1.04
COL9A1-205ENST00000447041 MCM3APO60318 1980 aa21.56■■□□□ 1.04
COL9A1-205ENST00000447041 ZNF536O15090 1300 aa21.55■■□□□ 1.04
COL9A1-205ENST00000447041 ORC4O43929 436 aa21.55■■□□□ 1.04
COL9A1-205ENST00000447041 AAMPQ13685 434 aa21.55■■□□□ 1.04
COL9A1-205ENST00000447041 PPP4R3BQ5MIZ7 849 aa21.55■■□□□ 1.04
COL9A1-205ENST00000447041 RNF180Q86T96 592 aa21.55■■□□□ 1.04
COL9A1-205ENST00000447041 FAM160B2Q86V87 743 aa21.55■■□□□ 1.04
COL9A1-205ENST00000447041 STAG1Q8WVM7 1258 aa21.55■■□□□ 1.04
COL9A1-205ENST00000447041 PRDM5Q9NQX1 630 aaPredicted RBP21.55■■□□□ 1.04
COL9A1-205ENST00000447041 PRKAG2Q9UGJ0 569 aa21.55■■□□□ 1.04
COL9A1-205ENST00000447041 FBXO40Q9UH90 709 aa21.55■■□□□ 1.04
COL9A1-205ENST00000447041 MTMR7Q9Y216 660 aa21.55■■□□□ 1.04
COL9A1-205ENST00000447041 SYNRGQ9UMZ2 1314 aa21.55■■□□□ 1.04
COL9A1-205ENST00000447041 ADAMTS4O75173 837 aa21.54■■□□□ 1.04
COL9A1-205ENST00000447041 IGHDP01880 384 aa21.54■■□□□ 1.04
COL9A1-205ENST00000447041 FGAP02671 866 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms