RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 SMCO2A6NFE2 343 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 TMEM232C9JQI7 657 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 SLU7O95391 586 aaKnown RBP11.87□□□□□ -0.51
TOP3B-210ENST00000444502 MMP1P03956 469 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 ADKP55263 362 aaKnown RBP11.87□□□□□ -0.51
TOP3B-210ENST00000444502 PTGDRQ13258 359 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 KMT5BQ4FZB7 885 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 BICD1Q96G01 975 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 EEF2KMTQ96G04 330 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 EPB41L4AQ9HCS5 686 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-210ENST00000444502 GINS2Q9Y248 185 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 COL5A2P05997 1499 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-210ENST00000444502 ERCC6LQ2NKX8 1250 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 SLFN13Q68D06 897 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 CCDC70Q6NSX1 233 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 USP17L2Q6R6M4 530 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 REXO1Q8N1G1 1221 aaKnown RBP11.87□□□□□ -0.51
TOP3B-210ENST00000444502 TCHPQ9BT92 498 aa11.87□□□□□ -0.51
TOP3B-210ENST00000444502 ECE2O60344 883 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 CCDC144BQ3MJ40 725 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 TDRD12Q587J7 1177 aaKnown RBP11.86□□□□□ -0.51
TOP3B-210ENST00000444502 FKBP15Q5T1M5 1219 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 SMYD4Q8IYR2 804 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-210ENST00000444502 DCPSQ96C86 337 aaKnown RBP11.86□□□□□ -0.51
TOP3B-210ENST00000444502 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-210ENST00000444502 VIRMAQ69YN4 1812 aaKnown RBP11.86□□□□□ -0.51
TOP3B-210ENST00000444502 RC3H1Q5TC82 1133 aaKnown RBP11.86□□□□□ -0.51
TOP3B-210ENST00000444502 GPIHBP1Q8IV16 184 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 MLKLQ8NB16 471 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 BAG1Q99933 345 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-210ENST00000444502 HPS5Q9UPZ3 1129 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 FLOT1O75955 427 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 CASP1P29466 404 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 ADCY7P51828 1080 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 HSP90B2PQ58FF3 399 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 RNF216Q9NWF9 866 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-210ENST00000444502 FMN2Q9NZ56 1722 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 PPP2R5BQ15173 497 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 NONOQ15233 471 aaKnown RBP eCLIP11.86□□□□□ -0.51
TOP3B-210ENST00000444502 INF2Q27J81 1249 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 MICALL1Q8N3F8 863 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 GIMAP7Q8NHV1 300 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 EPSTI1Q96J88 318 aa11.86□□□□□ -0.51
TOP3B-210ENST00000444502 PPP6R2O75170 966 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 SCG2P13521 617 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 COL23A1Q86Y22 540 aaPredicted RBP11.85□□□□□ -0.51
TOP3B-210ENST00000444502 RTKN2Q8IZC4 609 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 IGSF22Q8N9C0 903 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 IGDCC4Q8TDY8 1250 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 SYMPKQ92797 1274 aaKnown RBP11.85□□□□□ -0.51
TOP3B-210ENST00000444502 MORC2Q9Y6X9 1032 aaPredicted RBP11.85□□□□□ -0.51
TOP3B-210ENST00000444502 FOXN1O15353 648 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 KLRK1P26718 216 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 STAG1Q8WVM7 1258 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 RNF26Q9BY78 433 aaPredicted RBP11.85□□□□□ -0.51
TOP3B-210ENST00000444502 SETD1AO15047 1707 aaKnown RBP11.85□□□□□ -0.51
TOP3B-210ENST00000444502 AP5Z1O43299 807 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 UBXN2AP68543 259 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 CCDC91Q7Z6B0 441 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 RMND1Q9NWS8 449 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 IVNS1ABPQ9Y6Y0 642 aa11.85□□□□□ -0.51
TOP3B-210ENST00000444502 NWD1Q149M9 1564 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 WTIPA6NIX2 430 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-210ENST00000444502 TRIM21P19474 475 aaKnown RBP11.84□□□□□ -0.51
TOP3B-210ENST00000444502 SSR1P43307 286 aaKnown RBP11.84□□□□□ -0.51
TOP3B-210ENST00000444502 UBXN1Q04323 297 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 GADL1Q6ZQY3 521 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 ENAHQ8N8S7 591 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-210ENST00000444502 TBC1D16Q8TBP0 767 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 FOXP1Q9H334 677 aaPredicted RBP11.84□□□□□ -0.51
TOP3B-210ENST00000444502 ZCCHC17Q9NP64 241 aaKnown RBP11.84□□□□□ -0.51
TOP3B-210ENST00000444502 PSMA7O14818 248 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 CRKP46108 304 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 SLC15A2Q16348 729 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 NCAPH2Q6IBW4 605 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 TICAM2Q86XR7 235 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 PYM1Q9BRP8 204 aaKnown RBP11.84□□□□□ -0.51
TOP3B-210ENST00000444502 TAB2Q9NYJ8 693 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 GYS1P13807 737 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 RDXP35241 583 aaKnown RBP11.84□□□□□ -0.51
TOP3B-210ENST00000444502 ALX1Q15699 326 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 BLIDQ8IZY5 108 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 SYNRGQ9UMZ2 1314 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 RRP15Q9Y3B9 282 aaKnown RBP11.84□□□□□ -0.51
TOP3B-210ENST00000444502 PCDHA1Q9Y5I3 950 aa11.84□□□□□ -0.51
TOP3B-210ENST00000444502 FAM205CA6NFA0 338 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 PHACTR2O75167 634 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 SNAP25P60880 206 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 SF3B3Q15393 1217 aaKnown RBP11.83□□□□□ -0.52
TOP3B-210ENST00000444502 PODNQ7Z5L7 613 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 CTAGE1Q96RT6 745 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 MPHOSPH6Q99547 160 aaKnown RBP11.83□□□□□ -0.52
TOP3B-210ENST00000444502 DESI2Q9BSY9 194 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 GOPCQ9HD26 462 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 DCAF15Q66K64 600 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 SHC4Q6S5L8 630 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 FERMT2Q96AC1 680 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 KCNF1Q9H3M0 494 aa11.83□□□□□ -0.52
TOP3B-210ENST00000444502 IMPACTQ9P2X3 320 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms