RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 ANGEL1Q9UNK9 670 aaKnown RBP11.32□□□□□ -0.6
LIN54-202ENST00000442461 FAM107AO95990 144 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 PRR16Q569H4 304 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 RETREG2Q8NC44 543 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 PLIN2Q99541 437 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 DEXIO95424 95 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 UBE3BQ7Z3V4 1068 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 ESR2Q92731 530 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 RHBDL2Q9NX52 303 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 LARGE1O95461 756 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 TMED10P49755 219 aaKnown RBP11.32□□□□□ -0.6
LIN54-202ENST00000442461 EGFL6Q8IUX8 553 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 ANKRD35Q8N283 1001 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 LRRC43Q8N309 656 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 CCDC68Q9H2F9 335 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 ECT2Q9H8V3 914 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 SUGCTQ9HAC7 445 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 SAMSN1Q9NSI8 373 aaKnown RBP11.32□□□□□ -0.6
LIN54-202ENST00000442461 ZFATQ9P243 1243 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 AMOTL2Q9Y2J4 779 aa11.32□□□□□ -0.6
LIN54-202ENST00000442461 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.32□□□□□ -0.6
LIN54-202ENST00000442461 FANCD2Q9BXW9 1451 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 ANXA1P04083 346 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 GPTP24298 496 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 MAGOHP61326 146 aaKnown RBP11.31□□□□□ -0.6
LIN54-202ENST00000442461 C6orf118Q5T5N4 469 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 TMCO4Q5TGY1 634 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 MAGOHBQ96A72 148 aaKnown RBP11.31□□□□□ -0.6
LIN54-202ENST00000442461 VCPKMTQ9H867 229 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 DLGAP2Q9P1A6 1054 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 TRPC6Q9Y210 931 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 TBCAO75347 108 aaKnown RBP11.31□□□□□ -0.6
LIN54-202ENST00000442461 MX2P20592 715 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 TNFAIP3P21580 790 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 RCN2Q14257 317 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 NAA35Q5VZE5 725 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 G2E3Q7L622 706 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 SH2D3CQ8N5H7 860 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 GSDMAQ96QA5 445 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 MKNK2Q9HBH9 465 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 TMEM232C9JQI7 657 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 DKC1O60832 514 aaKnown RBP eCLIP11.31□□□□□ -0.6
LIN54-202ENST00000442461 SRGAP2O75044 1071 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 DCTN3O75935 186 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 STRN3Q13033 797 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 SNX1Q13596 522 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 PPP4R3AQ6IN85 833 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 MFN1Q8IWA4 741 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 TMEM87BQ96K49 555 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 CLIC6Q96NY7 704 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 MOV10L1Q9BXT6 1211 aaKnown RBP11.31□□□□□ -0.6
LIN54-202ENST00000442461 TSC22D4Q9Y3Q8 395 aa11.31□□□□□ -0.6
LIN54-202ENST00000442461 RASGRF2O14827 1237 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 ANP32DO95626 131 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 GJC1P36383 396 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 SERPINB4P48594 390 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 MRPS25P82663 173 aaKnown RBP11.3□□□□□ -0.6
LIN54-202ENST00000442461 KRT79Q5XKE5 535 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 DHX40Q8IX18 779 aaKnown RBP11.3□□□□□ -0.6
LIN54-202ENST00000442461 PAF1Q8N7H5 531 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 BLZF1Q9H2G9 400 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 ZNF287Q9HBT7 754 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 THAP12O43422 761 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 PPP6R2O75170 966 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 ADCY2Q08462 1091 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 CCNI2Q6ZMN8 369 aaPredicted RBP11.3□□□□□ -0.6
LIN54-202ENST00000442461 TRIML2Q8N7C3 387 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 FMO2Q99518 471 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 SBNO2Q9Y2G9 1366 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
LIN54-202ENST00000442461 PGRMC1O00264 195 aaKnown RBP11.3□□□□□ -0.6
LIN54-202ENST00000442461 GMNNO75496 209 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 TRPA1O75762 1119 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 PHBP35232 272 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 RASSF7Q02833 373 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 IFIT5Q13325 482 aaKnown RBP11.3□□□□□ -0.6
LIN54-202ENST00000442461 PREPLQ4J6C6 727 aaPredicted RBP11.3□□□□□ -0.6
LIN54-202ENST00000442461 IFIT1BQ5T764 474 aaKnown RBP11.3□□□□□ -0.6
LIN54-202ENST00000442461 MAP4K1Q92918 833 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 ZNF653Q96CK0 615 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 CYFIP2Q96F07 1278 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
LIN54-202ENST00000442461 ZC4H2Q9NQZ6 224 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.3□□□□□ -0.6
LIN54-202ENST00000442461 SLC4A7Q9Y6M7 1214 aa11.3□□□□□ -0.6
LIN54-202ENST00000442461 CYLC2Q14093 348 aaPredicted RBP11.29□□□□□ -0.6
LIN54-202ENST00000442461 KCNB1Q14721 858 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 SV2BQ7L1I2 683 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 PIP4K2CQ8TBX8 421 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 NLRP7Q8WX94 980 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 SEC16BQ96JE7 1060 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 RMI1Q9H9A7 625 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 ABCC2Q92887 1545 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 ESRRAP11474 423 aaPredicted RBP11.29□□□□□ -0.6
LIN54-202ENST00000442461 SEC24CP53992 1094 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 PLTPP55058 493 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 DZIP3Q86Y13 1208 aaKnown RBP11.29□□□□□ -0.6
LIN54-202ENST00000442461 LINS1Q8NG48 757 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 DNAJC9Q8WXX5 260 aa11.29□□□□□ -0.6
LIN54-202ENST00000442461 RUBCNQ92622 972 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms