RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 ARRDC4Q8NCT1 418 aa19.06■□□□□ 0.64
ITGB1-207ENST00000439974 NUP88Q99567 741 aaPredicted RBP19.06■□□□□ 0.64
ITGB1-207ENST00000439974 IL25Q9H293 177 aa19.06■□□□□ 0.64
ITGB1-207ENST00000439974 CLIP2Q9UDT6 1046 aa19.06■□□□□ 0.64
ITGB1-207ENST00000439974 PRAMEF19Q5SWL8 479 aa19.05■□□□□ 0.64
ITGB1-207ENST00000439974 GJC2Q5T442 439 aaPredicted RBP19.05■□□□□ 0.64
ITGB1-207ENST00000439974 ANO1Q5XXA6 986 aa19.05■□□□□ 0.64
ITGB1-207ENST00000439974 TEX13BQ9BXU2 312 aa19.05■□□□□ 0.64
ITGB1-207ENST00000439974 NAPBQ9H115 298 aa19.05■□□□□ 0.64
ITGB1-207ENST00000439974 NRBP1Q9UHY1 535 aa19.05■□□□□ 0.64
ITGB1-207ENST00000439974 SYNPO2Q9UMS6 1093 aa19.05■□□□□ 0.64
ITGB1-207ENST00000439974 DIS3Q9Y2L1 958 aaKnown RBP19.05■□□□□ 0.64
ITGB1-207ENST00000439974 PLXNA1Q9UIW2 1896 aa19.05■□□□□ 0.64
ITGB1-207ENST00000439974 KBTBD13C9JR72 458 aa19.04■□□□□ 0.64
ITGB1-207ENST00000439974 PGK2P07205 417 aa19.04■□□□□ 0.64
ITGB1-207ENST00000439974 SLC3A2P08195 630 aaKnown RBP19.04■□□□□ 0.64
ITGB1-207ENST00000439974 ATN1P54259 1190 aaPredicted RBP19.04■□□□□ 0.64
ITGB1-207ENST00000439974 PDE4BQ07343 736 aa19.04■□□□□ 0.64
ITGB1-207ENST00000439974 ZNF792Q3KQV3 632 aa19.04■□□□□ 0.64
ITGB1-207ENST00000439974 TDHQ8IZJ6 230 aa19.04■□□□□ 0.64
ITGB1-207ENST00000439974 MKL1Q969V6 931 aa19.04■□□□□ 0.64
ITGB1-207ENST00000439974 CEP95Q96GE4 821 aa19.04■□□□□ 0.64
ITGB1-207ENST00000439974 LRCH3Q96II8 777 aa19.04■□□□□ 0.64
ITGB1-207ENST00000439974 UBE2OQ9C0C9 1292 aaKnown RBP19.04■□□□□ 0.64
ITGB1-207ENST00000439974 MTMR4Q9NYA4 1195 aa19.04■□□□□ 0.64
ITGB1-207ENST00000439974 PLIN4Q96Q06 1357 aa19.04■□□□□ 0.64
ITGB1-207ENST00000439974 DNAH12Q6ZR08 3092 aa19.04■□□□□ 0.64
ITGB1-207ENST00000439974 CCDC171Q6TFL3 1326 aa19.03■□□□□ 0.64
ITGB1-207ENST00000439974 TTLL1O95922 423 aa19.03■□□□□ 0.64
ITGB1-207ENST00000439974 CTDSPL2Q05D32 466 aa19.03■□□□□ 0.64
ITGB1-207ENST00000439974 PPARAQ07869 468 aa19.03■□□□□ 0.64
ITGB1-207ENST00000439974 SNRNP48Q6IEG0 339 aaKnown RBP19.03■□□□□ 0.64
ITGB1-207ENST00000439974 PRPF38AQ8NAV1 312 aaKnown RBP19.03■□□□□ 0.64
ITGB1-207ENST00000439974 NEDD1Q8NHV4 660 aa19.03■□□□□ 0.64
ITGB1-207ENST00000439974 TINF2Q9BSI4 451 aa19.03■□□□□ 0.64
ITGB1-207ENST00000439974 INCENPQ9NQS7 918 aa19.03■□□□□ 0.64
ITGB1-207ENST00000439974 PPP4R2Q9NY27 417 aa19.03■□□□□ 0.64
ITGB1-207ENST00000439974 SMCHD1A6NHR9 2005 aa19.03■□□□□ 0.64
ITGB1-207ENST00000439974 MYCNP04198 464 aaPredicted RBP19.02■□□□□ 0.64
ITGB1-207ENST00000439974 TSPY3P0CV98 308 aa19.02■□□□□ 0.64
ITGB1-207ENST00000439974 TSPY8P0CW00 308 aa19.02■□□□□ 0.64
ITGB1-207ENST00000439974 HSPD1P10809 573 aaKnown RBP19.02■□□□□ 0.64
ITGB1-207ENST00000439974 LRIT3Q3SXY7 679 aa19.02■□□□□ 0.64
ITGB1-207ENST00000439974 LRRC47Q8N1G4 583 aaKnown RBP19.02■□□□□ 0.64
ITGB1-207ENST00000439974 GMCL1P1Q8NEA9 526 aa19.02■□□□□ 0.64
ITGB1-207ENST00000439974 FEM1BQ9UK73 627 aa19.02■□□□□ 0.64
ITGB1-207ENST00000439974 CTDP1Q9Y5B0 961 aaPredicted RBP19.02■□□□□ 0.64
ITGB1-207ENST00000439974 TACC3Q9Y6A5 838 aa19.02■□□□□ 0.64
ITGB1-207ENST00000439974 ATP2A1O14983 1001 aa19.01■□□□□ 0.63
ITGB1-207ENST00000439974 ZBED4O75132 1171 aa19.01■□□□□ 0.63
ITGB1-207ENST00000439974 RTP1P59025 263 aa19.01■□□□□ 0.63
ITGB1-207ENST00000439974 MDM2Q00987 491 aaPredicted RBP19.01■□□□□ 0.63
ITGB1-207ENST00000439974 LRRC41Q15345 812 aa19.01■□□□□ 0.63
ITGB1-207ENST00000439974 FAM47AQ5JRC9 791 aa19.01■□□□□ 0.63
ITGB1-207ENST00000439974 KIFC2Q96AC6 838 aa19.01■□□□□ 0.63
ITGB1-207ENST00000439974 HIP1O00291 1037 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 FGAP02671 866 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 RARBP10826 455 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 CHMLP26374 656 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 HAND2P61296 217 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 TFAP4Q01664 338 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 SLFN13Q68D06 897 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 GPR153Q6NV75 609 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 CPXCR1Q8N123 301 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 DDX11Q96FC9 970 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 XPNPEP3Q9NQH7 507 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 PRKAG2Q9UGJ0 569 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 RIPK3Q9Y572 518 aa19■□□□□ 0.63
ITGB1-207ENST00000439974 SLC39A5Q6ZMH5 540 aa18.99■□□□□ 0.63
ITGB1-207ENST00000439974 MSL3Q8N5Y2 521 aaKnown RBP18.99■□□□□ 0.63
ITGB1-207ENST00000439974 LBHD1Q9BQE6 289 aaPredicted RBP18.99■□□□□ 0.63
ITGB1-207ENST00000439974 SLC38A10Q9HBR0 1119 aa18.99■□□□□ 0.63
ITGB1-207ENST00000439974 CNPY2Q9Y2B0 182 aa18.99■□□□□ 0.63
ITGB1-207ENST00000439974 ATP11BQ9Y2G3 1177 aa18.99■□□□□ 0.63
ITGB1-207ENST00000439974 ZNF865P0CJ78 1059 aaPredicted RBP18.98■□□□□ 0.63
ITGB1-207ENST00000439974 BMP3P12645 472 aa18.98■□□□□ 0.63
ITGB1-207ENST00000439974 AKR1A1P14550 325 aa18.98■□□□□ 0.63
ITGB1-207ENST00000439974 TAL1P17542 331 aaPredicted RBP18.98■□□□□ 0.63
ITGB1-207ENST00000439974 ADCYAP1R1P41586 468 aa18.98■□□□□ 0.63
ITGB1-207ENST00000439974 SLC4A3P48751 1232 aa18.98■□□□□ 0.63
ITGB1-207ENST00000439974 OAZ1P54368 228 aa18.98■□□□□ 0.63
ITGB1-207ENST00000439974 SNX17Q15036 470 aa18.98■□□□□ 0.63
ITGB1-207ENST00000439974 PPP4R3BQ5MIZ7 849 aa18.98■□□□□ 0.63
ITGB1-207ENST00000439974 TICAM2Q86XR7 235 aa18.98■□□□□ 0.63
ITGB1-207ENST00000439974 RAVER2Q9HCJ3 691 aaKnown RBP18.98■□□□□ 0.63
ITGB1-207ENST00000439974 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.98■□□□□ 0.63
ITGB1-207ENST00000439974 DNAJC25-GNG10A0A024R161 153 aa18.97■□□□□ 0.63
ITGB1-207ENST00000439974 ALX1Q15699 326 aa18.97■□□□□ 0.63
ITGB1-207ENST00000439974 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.97■□□□□ 0.63
ITGB1-207ENST00000439974 RNF180Q86T96 592 aa18.97■□□□□ 0.63
ITGB1-207ENST00000439974 FBXO40Q9UH90 709 aa18.97■□□□□ 0.63
ITGB1-207ENST00000439974 ISY1Q9ULR0 285 aaKnown RBP18.97■□□□□ 0.63
ITGB1-207ENST00000439974 PHF24Q9UPV7 400 aa18.97■□□□□ 0.63
ITGB1-207ENST00000439974 SYNGAP1Q96PV0 1343 aa18.97■□□□□ 0.63
ITGB1-207ENST00000439974 TSPY2A6NKD2 308 aa18.96■□□□□ 0.63
ITGB1-207ENST00000439974 FDX1P10109 184 aa18.96■□□□□ 0.63
ITGB1-207ENST00000439974 STAT2P52630 851 aa18.96■□□□□ 0.63
ITGB1-207ENST00000439974 TRIM60Q495X7 471 aa18.96■□□□□ 0.63
ITGB1-207ENST00000439974 C1orf53Q5VUE5 145 aa18.96■□□□□ 0.63
ITGB1-207ENST00000439974 MAMDC4Q6UXC1 1216 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms