RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 DDX11Q96FC9 970 aa21.9■■□□□ 1.1
AC004540.1-201ENST00000439120 RWDD1Q9H446 243 aaPredicted RBP21.9■■□□□ 1.1
AC004540.1-201ENST00000439120 HELLSQ9NRZ9 838 aa21.9■■□□□ 1.1
AC004540.1-201ENST00000439120 DIS3Q9Y2L1 958 aaKnown RBP21.9■■□□□ 1.1
AC004540.1-201ENST00000439120 TRIM6-TRIM34B2RNG4 842 aa21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 BMP3P12645 472 aa21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 BMP8BP34820 402 aa21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 MAGEA10P43363 369 aaPredicted RBP21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 ATN1P54259 1190 aaPredicted RBP21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 CTDSPL2Q05D32 466 aa21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 IKQ13123 557 aaPredicted RBP21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 GDF15Q99988 308 aa21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 TINF2Q9BSI4 451 aa21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 LNPKQ9C0E8 428 aa21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 NRBP1Q9UHY1 535 aa21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 STX8Q9UNK0 236 aa21.89■■□□□ 1.09
AC004540.1-201ENST00000439120 ZNF792Q3KQV3 632 aa21.88■■□□□ 1.09
AC004540.1-201ENST00000439120 CNPY2Q9Y2B0 182 aa21.88■■□□□ 1.09
AC004540.1-201ENST00000439120 RANBP2P49792 3224 aaKnown RBP21.88■■□□□ 1.09
AC004540.1-201ENST00000439120 RARBP10826 455 aa21.87■■□□□ 1.09
AC004540.1-201ENST00000439120 MCMDC2Q4G0Z9 681 aa21.87■■□□□ 1.09
AC004540.1-201ENST00000439120 B4GALNT3Q6L9W6 998 aa21.87■■□□□ 1.09
AC004540.1-201ENST00000439120 RAVER2Q9HCJ3 691 aaKnown RBP21.87■■□□□ 1.09
AC004540.1-201ENST00000439120 TOMM22Q9NS69 142 aa21.87■■□□□ 1.09
AC004540.1-201ENST00000439120 PRKAG2Q9UGJ0 569 aa21.87■■□□□ 1.09
AC004540.1-201ENST00000439120 TMEM232C9JQI7 657 aa21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 ATP2A1O14983 1001 aa21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 RANBP6O60518 1105 aaKnown RBP21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 SLC1A4P43007 532 aa21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 STAT2P52630 851 aa21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 VPS53Q5VIR6 699 aa21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 RILPL2Q969X0 211 aa21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 FAM227BQ96M60 508 aa21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 UBE2OQ9C0C9 1292 aaKnown RBP21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 SLC38A10Q9HBR0 1119 aa21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 FBXO40Q9UH90 709 aa21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 RIPK3Q9Y572 518 aa21.86■■□□□ 1.09
AC004540.1-201ENST00000439120 FOXP2O15409 715 aa21.85■■□□□ 1.09
AC004540.1-201ENST00000439120 FDX1P10109 184 aa21.85■■□□□ 1.09
AC004540.1-201ENST00000439120 OAZ1P54368 228 aa21.85■■□□□ 1.09
AC004540.1-201ENST00000439120 FAM160B2Q86V87 743 aa21.85■■□□□ 1.09
AC004540.1-201ENST00000439120 TICAM2Q86XR7 235 aa21.85■■□□□ 1.09
AC004540.1-201ENST00000439120 ANKRD35Q8N283 1001 aa21.85■■□□□ 1.09
AC004540.1-201ENST00000439120 CHURC1Q8WUH1 139 aa21.85■■□□□ 1.09
AC004540.1-201ENST00000439120 CHMP4CQ96CF2 233 aa21.85■■□□□ 1.09
AC004540.1-201ENST00000439120 LBHD1Q9BQE6 289 aaPredicted RBP21.85■■□□□ 1.09
AC004540.1-201ENST00000439120 XPNPEP3Q9NQH7 507 aa21.85■■□□□ 1.09
AC004540.1-201ENST00000439120 ANAPC4Q9UJX5 808 aa21.85■■□□□ 1.09
AC004540.1-201ENST00000439120 A0A0D9SFI3 127 aa21.84■■□□□ 1.09
AC004540.1-201ENST00000439120 RTP1P59025 263 aa21.84■■□□□ 1.09
AC004540.1-201ENST00000439120 LRRC41Q15345 812 aa21.84■■□□□ 1.09
AC004540.1-201ENST00000439120 ALX1Q15699 326 aa21.84■■□□□ 1.09
AC004540.1-201ENST00000439120 SMC5Q8IY18 1101 aa21.84■■□□□ 1.09
AC004540.1-201ENST00000439120 MSL3Q8N5Y2 521 aaKnown RBP21.84■■□□□ 1.09
AC004540.1-201ENST00000439120 GMCL1Q96IK5 515 aa21.84■■□□□ 1.09
AC004540.1-201ENST00000439120 ATP11BQ9Y2G3 1177 aa21.84■■□□□ 1.09
AC004540.1-201ENST00000439120 AKR1A1P14550 325 aa21.83■■□□□ 1.09
AC004540.1-201ENST00000439120 MCCP23508 829 aa21.83■■□□□ 1.09
AC004540.1-201ENST00000439120 NMIQ13287 307 aaPredicted RBP21.83■■□□□ 1.09
AC004540.1-201ENST00000439120 RRP12Q5JTH9 1297 aaKnown RBP21.83■■□□□ 1.09
AC004540.1-201ENST00000439120 RNF180Q86T96 592 aa21.83■■□□□ 1.09
AC004540.1-201ENST00000439120 TDHQ8IZJ6 230 aa21.83■■□□□ 1.09
AC004540.1-201ENST00000439120 CHST13Q8NET6 341 aa21.83■■□□□ 1.09
AC004540.1-201ENST00000439120 INCENPQ9NQS7 918 aa21.83■■□□□ 1.09
AC004540.1-201ENST00000439120 HOMER2Q9NSB8 354 aa21.83■■□□□ 1.09
AC004540.1-201ENST00000439120 MTMR7Q9Y216 660 aa21.83■■□□□ 1.09
AC004540.1-201ENST00000439120 SYNGAP1Q96PV0 1343 aa21.82■■□□□ 1.08
AC004540.1-201ENST00000439120 ORC4O43929 436 aa21.82■■□□□ 1.08
AC004540.1-201ENST00000439120 TAL1P17542 331 aaPredicted RBP21.82■■□□□ 1.08
AC004540.1-201ENST00000439120 ADCYAP1R1P41586 468 aa21.82■■□□□ 1.08
AC004540.1-201ENST00000439120 MFAP1P55081 439 aaKnown RBP21.82■■□□□ 1.08
AC004540.1-201ENST00000439120 MDM2Q00987 491 aaPredicted RBP21.82■■□□□ 1.08
AC004540.1-201ENST00000439120 SLC39A5Q6ZMH5 540 aa21.82■■□□□ 1.08
AC004540.1-201ENST00000439120 CHD1LQ86WJ1 897 aa21.82■■□□□ 1.08
AC004540.1-201ENST00000439120 STAG1Q8WVM7 1258 aa21.82■■□□□ 1.08
AC004540.1-201ENST00000439120 DNAH12Q6ZR08 3092 aa21.81■■□□□ 1.08
AC004540.1-201ENST00000439120 NMT2O60551 498 aa21.81■■□□□ 1.08
AC004540.1-201ENST00000439120 FGAP02671 866 aa21.81■■□□□ 1.08
AC004540.1-201ENST00000439120 KCTD1Q719H9 257 aa21.81■■□□□ 1.08
AC004540.1-201ENST00000439120 FERMT2Q96AC1 680 aa21.81■■□□□ 1.08
AC004540.1-201ENST00000439120 IL17RBQ9NRM6 502 aa21.81■■□□□ 1.08
AC004540.1-201ENST00000439120 ZHX1Q9UKY1 873 aaPredicted RBP21.81■■□□□ 1.08
AC004540.1-201ENST00000439120 CCDC171Q6TFL3 1326 aa21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 DNAJC25-GNG10A0A024R161 153 aa21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 SOX1O00570 391 aaPredicted RBP21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 PGK1P00558 417 aa21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 ZNF865P0CJ78 1059 aaPredicted RBP21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 HSPD1P10809 573 aaKnown RBP21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 CCDC96Q2M329 555 aa21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 RCSD1Q6JBY9 416 aa21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 ZNF467Q7Z7K2 595 aaPredicted RBP21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 EXOC6Q8TAG9 804 aa21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 LRCH3Q96II8 777 aa21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 ACAD9Q9H845 621 aa21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 PRDM5Q9NQX1 630 aaPredicted RBP21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 FAM184BQ9ULE4 1060 aa21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 SMCHD1A6NHR9 2005 aa21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 ZMYM6O95789 1325 aa21.8■■□□□ 1.08
AC004540.1-201ENST00000439120 NUCB1Q02818 461 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms