RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 DCAF4Q8WV16 495 aa20.98■□□□□ 0.95
NCSTN-208ENST00000438008 KIFC2Q96AC6 838 aa20.98■□□□□ 0.95
NCSTN-208ENST00000438008 RNF208Q9H0X6 261 aa20.98■□□□□ 0.95
NCSTN-208ENST00000438008 UNC93B1Q9H1C4 597 aa20.98■□□□□ 0.95
NCSTN-208ENST00000438008 SLC38A10Q9HBR0 1119 aa20.98■□□□□ 0.95
NCSTN-208ENST00000438008 B4E1Z4 1266 aa20.97■□□□□ 0.95
NCSTN-208ENST00000438008 CYP21A2P08686 494 aa20.97■□□□□ 0.95
NCSTN-208ENST00000438008 IQCA1Q86XH1 822 aa20.97■□□□□ 0.95
NCSTN-208ENST00000438008 ANKS1AQ92625 1134 aa20.97■□□□□ 0.95
NCSTN-208ENST00000438008 ESYT1Q9BSJ8 1104 aa20.97■□□□□ 0.95
NCSTN-208ENST00000438008 TEX13BQ9BXU2 312 aa20.97■□□□□ 0.95
NCSTN-208ENST00000438008 ZSWIM5Q9P217 1185 aa20.97■□□□□ 0.95
NCSTN-208ENST00000438008 ZKSCAN1P17029 563 aaPredicted RBP20.96■□□□□ 0.95
NCSTN-208ENST00000438008 ADORA2AP29274 412 aa20.96■□□□□ 0.95
NCSTN-208ENST00000438008 OAZ1P54368 228 aa20.96■□□□□ 0.95
NCSTN-208ENST00000438008 MAP3K21Q5TCX8 1036 aa20.96■□□□□ 0.95
NCSTN-208ENST00000438008 PAK6Q9NQU5 681 aaPredicted RBP20.96■□□□□ 0.95
NCSTN-208ENST00000438008 KIAA0100Q14667 2235 aaKnown RBP20.95■□□□□ 0.94
NCSTN-208ENST00000438008 FCER1AP12319 257 aa20.95■□□□□ 0.94
NCSTN-208ENST00000438008 CAPN2P17655 700 aa20.95■□□□□ 0.94
NCSTN-208ENST00000438008 GJA8P48165 433 aa20.95■□□□□ 0.94
NCSTN-208ENST00000438008 TRIM32Q13049 653 aa20.95■□□□□ 0.94
NCSTN-208ENST00000438008 CCL14Q16627 93 aa20.95■□□□□ 0.94
NCSTN-208ENST00000438008 KIAA1211Q6ZU35 1233 aa20.95■□□□□ 0.94
NCSTN-208ENST00000438008 KCTD1Q719H9 257 aa20.95■□□□□ 0.94
NCSTN-208ENST00000438008 ZSCAN10Q96SZ4 725 aaPredicted RBP20.95■□□□□ 0.94
NCSTN-208ENST00000438008 ZKSCAN3Q9BRR0 538 aa20.95■□□□□ 0.94
NCSTN-208ENST00000438008 LSG1Q9H089 658 aaKnown RBP20.95■□□□□ 0.94
NCSTN-208ENST00000438008 PPP4R2Q9NY27 417 aa20.95■□□□□ 0.94
NCSTN-208ENST00000438008 RPTORQ8N122 1335 aa20.95■□□□□ 0.94
NCSTN-208ENST00000438008 IGHA2P01877 340 aa20.94■□□□□ 0.94
NCSTN-208ENST00000438008 SNHG28P0DPA3 235 aa20.94■□□□□ 0.94
NCSTN-208ENST00000438008 SNRNP48Q6IEG0 339 aaKnown RBP20.94■□□□□ 0.94
NCSTN-208ENST00000438008 BTNL9Q6UXG8 535 aa20.94■□□□□ 0.94
NCSTN-208ENST00000438008 RASGRP2Q7LDG7 609 aa20.94■□□□□ 0.94
NCSTN-208ENST00000438008 DPP9Q86TI2 863 aa20.94■□□□□ 0.94
NCSTN-208ENST00000438008 NPLOC4Q8TAT6 608 aa20.94■□□□□ 0.94
NCSTN-208ENST00000438008 ISY1Q9ULR0 285 aaKnown RBP20.94■□□□□ 0.94
NCSTN-208ENST00000438008 CTDP1Q9Y5B0 961 aaPredicted RBP20.94■□□□□ 0.94
NCSTN-208ENST00000438008 RBM8AQ9Y5S9 174 aaKnown RBP20.94■□□□□ 0.94
NCSTN-208ENST00000438008 ZNF236Q9UL36 1845 aa20.93■□□□□ 0.94
NCSTN-208ENST00000438008 COBLO75128 1261 aa20.93■□□□□ 0.94
NCSTN-208ENST00000438008 PDHBP11177 359 aa20.93■□□□□ 0.94
NCSTN-208ENST00000438008 TRDNQ13061 729 aa20.93■□□□□ 0.94
NCSTN-208ENST00000438008 IKQ13123 557 aaPredicted RBP20.93■□□□□ 0.94
NCSTN-208ENST00000438008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.93■□□□□ 0.94
NCSTN-208ENST00000438008 CHMP4CQ96CF2 233 aa20.93■□□□□ 0.94
NCSTN-208ENST00000438008 SHISA4Q96DD7 197 aa20.93■□□□□ 0.94
NCSTN-208ENST00000438008 MMP19Q99542 508 aa20.93■□□□□ 0.94
NCSTN-208ENST00000438008 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.93■□□□□ 0.94
NCSTN-208ENST00000438008 RAVER2Q9HCJ3 691 aaKnown RBP20.93■□□□□ 0.94
NCSTN-208ENST00000438008 HMX1Q9NP08 348 aaPredicted RBP20.93■□□□□ 0.94
NCSTN-208ENST00000438008 SLC5A4Q9NY91 659 aa20.93■□□□□ 0.94
NCSTN-208ENST00000438008 FLRT1Q9NZU1 646 aa20.93■□□□□ 0.94
NCSTN-208ENST00000438008 PRR12Q9ULL5 1215 aa20.93■□□□□ 0.94
NCSTN-208ENST00000438008 RIPK3Q9Y572 518 aa20.93■□□□□ 0.94
NCSTN-208ENST00000438008 SGPL1O95470 568 aa20.92■□□□□ 0.94
NCSTN-208ENST00000438008 PRKAR2AP13861 404 aaKnown RBP20.92■□□□□ 0.94
NCSTN-208ENST00000438008 CACNB2Q08289 660 aaPredicted RBP20.92■□□□□ 0.94
NCSTN-208ENST00000438008 CCDC96Q2M329 555 aa20.92■□□□□ 0.94
NCSTN-208ENST00000438008 OLFML2BQ68BL8 750 aa20.92■□□□□ 0.94
NCSTN-208ENST00000438008 CPXCR1Q8N123 301 aa20.92■□□□□ 0.94
NCSTN-208ENST00000438008 ENAHQ8N8S7 591 aaPredicted RBP20.92■□□□□ 0.94
NCSTN-208ENST00000438008 U2AF1L4Q8WU68 220 aaKnown RBP20.92■□□□□ 0.94
NCSTN-208ENST00000438008 MTMR7Q9Y216 660 aa20.92■□□□□ 0.94
NCSTN-208ENST00000438008 COL11A1P12107 1806 aaPredicted RBP20.92■□□□□ 0.94
NCSTN-208ENST00000438008 E7EWF7 191 aa20.91■□□□□ 0.94
NCSTN-208ENST00000438008 CDC45O75419 566 aa20.91■□□□□ 0.94
NCSTN-208ENST00000438008 TNKSO95271 1327 aa20.91■□□□□ 0.94
NCSTN-208ENST00000438008 ZNF543Q08ER8 600 aa20.91■□□□□ 0.94
NCSTN-208ENST00000438008 KCTD2Q14681 263 aa20.91■□□□□ 0.94
NCSTN-208ENST00000438008 MFSD14CQ5VZR4 134 aa20.91■□□□□ 0.94
NCSTN-208ENST00000438008 TTBK2Q6IQ55 1244 aa20.91■□□□□ 0.94
NCSTN-208ENST00000438008 UBAC1Q9BSL1 405 aa20.91■□□□□ 0.94
NCSTN-208ENST00000438008 TAF6LQ9Y6J9 622 aa20.91■□□□□ 0.94
NCSTN-208ENST00000438008 ZNF536O15090 1300 aa20.9■□□□□ 0.94
NCSTN-208ENST00000438008 SEC23AQ15436 765 aa20.9■□□□□ 0.94
NCSTN-208ENST00000438008 CASC1Q6TDU7 716 aa20.9■□□□□ 0.94
NCSTN-208ENST00000438008 CYB5R4Q7L1T6 521 aa20.9■□□□□ 0.94
NCSTN-208ENST00000438008 PNMA1Q8ND90 353 aa20.9■□□□□ 0.94
NCSTN-208ENST00000438008 CHST13Q8NET6 341 aa20.9■□□□□ 0.94
NCSTN-208ENST00000438008 NCOA7Q8NI08 942 aa20.9■□□□□ 0.94
NCSTN-208ENST00000438008 DEFB118Q96PH6 123 aa20.9■□□□□ 0.94
NCSTN-208ENST00000438008 CRISPLD2Q9H0B8 497 aa20.9■□□□□ 0.94
NCSTN-208ENST00000438008 KAT14Q9H8E8 782 aa20.9■□□□□ 0.94
NCSTN-208ENST00000438008 FBXO40Q9UH90 709 aa20.9■□□□□ 0.94
NCSTN-208ENST00000438008 DIS3Q9Y2L1 958 aaKnown RBP20.9■□□□□ 0.94
NCSTN-208ENST00000438008 FRMPD2Q68DX3 1309 aaPredicted RBP20.89■□□□□ 0.93
NCSTN-208ENST00000438008 GPATCH4Q5T3I0 446 aaKnown RBP20.89■□□□□ 0.93
NCSTN-208ENST00000438008 SYDE2Q5VT97 1194 aa20.89■□□□□ 0.93
NCSTN-208ENST00000438008 STOX1Q6ZVD7 989 aa20.89■□□□□ 0.93
NCSTN-208ENST00000438008 RANBP17Q9H2T7 1088 aaKnown RBP20.89■□□□□ 0.93
NCSTN-208ENST00000438008 GPCPD1Q9NPB8 672 aa20.89■□□□□ 0.93
NCSTN-208ENST00000438008 ANO2Q9NQ90 1003 aa20.89■□□□□ 0.93
NCSTN-208ENST00000438008 BRCA2P51587 3418 aa20.88■□□□□ 0.93
NCSTN-208ENST00000438008 SLC16A2P36021 539 aa20.88■□□□□ 0.93
NCSTN-208ENST00000438008 NECTIN1Q15223 517 aa20.88■□□□□ 0.93
NCSTN-208ENST00000438008 ZNF792Q3KQV3 632 aa20.88■□□□□ 0.93
NCSTN-208ENST00000438008 TKFCQ3LXA3 575 aa20.88■□□□□ 0.93
NCSTN-208ENST00000438008 RALYLQ86SE5 291 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms