RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 FASTKD5Q7L8L6 764 aaKnown RBP20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 FAM160B2Q86V87 743 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 FAM177A1Q8N128 213 aaPredicted RBP20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 FAM43AQ8N2R8 423 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 NECAB1Q8N987 351 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 CHURC1Q8WUH1 139 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 MYL10Q9BUA6 226 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 SPZ1Q9BXG8 430 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 RNF26Q9BY78 433 aaPredicted RBP20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 MAD2L2Q9UI95 211 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 PNMA2Q9UL42 364 aa20.52■□□□□ 0.88
CCDC144A-209ENST00000436374 A0A1W2PRG0 241 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 KLRF2D3W0D1 207 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 IRF6O14896 467 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 LARGE1O95461 756 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 FDX1P10109 184 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 PABPC4Q13310 644 aaKnown RBP eCLIP20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 TAF1CQ15572 869 aaPredicted RBP20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 SHROOM1Q2M3G4 852 aaPredicted RBP20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 OTOP1Q7RTM1 612 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 CLEC10AQ8IUN9 316 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 FAM184AQ8NB25 1140 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 PROCA1Q8NCQ7 364 aaPredicted RBP20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 CD99L2Q8TCZ2 262 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 ACER1Q8TDN7 264 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 ZFYVE28Q9HCC9 887 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 FEM1BQ9UK73 627 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 KCNH4Q9UQ05 1017 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 HTTP42858 3142 aa20.51■□□□□ 0.87
CCDC144A-209ENST00000436374 TRIM75PA6NK02 468 aa20.5■□□□□ 0.87
CCDC144A-209ENST00000436374 XBP1P17861 261 aa20.5■□□□□ 0.87
CCDC144A-209ENST00000436374 ADD1P35611 737 aaKnown RBP20.5■□□□□ 0.87
CCDC144A-209ENST00000436374 MTMR2Q13614 643 aa20.5■□□□□ 0.87
CCDC144A-209ENST00000436374 CCDC144CPQ8IYA2 1237 aa20.5■□□□□ 0.87
CCDC144A-209ENST00000436374 SMARCC2Q8TAQ2 1214 aa20.5■□□□□ 0.87
CCDC144A-209ENST00000436374 ISY1Q9ULR0 285 aaKnown RBP20.5■□□□□ 0.87
CCDC144A-209ENST00000436374 TRIM17Q9Y577 477 aa20.5■□□□□ 0.87
CCDC144A-209ENST00000436374 ZSWIM8A7E2V4 1837 aa20.5■□□□□ 0.87
CCDC144A-209ENST00000436374 hCG_1984214I3L0E3 225 aa20.49■□□□□ 0.87
CCDC144A-209ENST00000436374 DEXIO95424 95 aa20.49■□□□□ 0.87
CCDC144A-209ENST00000436374 FMNL1O95466 1100 aaPredicted RBP20.49■□□□□ 0.87
CCDC144A-209ENST00000436374 RXRAP19793 462 aa20.49■□□□□ 0.87
CCDC144A-209ENST00000436374 STAT2P52630 851 aa20.49■□□□□ 0.87
CCDC144A-209ENST00000436374 ZNF713Q8N859 430 aaPredicted RBP20.49■□□□□ 0.87
CCDC144A-209ENST00000436374 NSUN7Q8NE18 718 aaKnown RBP20.49■□□□□ 0.87
CCDC144A-209ENST00000436374 NCOA5Q9HCD5 579 aaKnown RBP20.49■□□□□ 0.87
CCDC144A-209ENST00000436374 SEC63Q9UGP8 760 aaKnown RBP20.49■□□□□ 0.87
CCDC144A-209ENST00000436374 PTPDC1A2A3K4 754 aa20.48■□□□□ 0.87
CCDC144A-209ENST00000436374 PRPF3O43395 683 aaKnown RBP20.48■□□□□ 0.87
CCDC144A-209ENST00000436374 CDC27P30260 824 aa20.48■□□□□ 0.87
CCDC144A-209ENST00000436374 IKQ13123 557 aaPredicted RBP20.48■□□□□ 0.87
CCDC144A-209ENST00000436374 ARHGEF6Q15052 776 aa20.48■□□□□ 0.87
CCDC144A-209ENST00000436374 BTNL9Q6UXG8 535 aa20.48■□□□□ 0.87
CCDC144A-209ENST00000436374 RRP36Q96EU6 259 aaKnown RBP20.48■□□□□ 0.87
CCDC144A-209ENST00000436374 FAM217BQ9NTX9 383 aaPredicted RBP20.48■□□□□ 0.87
CCDC144A-209ENST00000436374 MTMR7Q9Y216 660 aa20.48■□□□□ 0.87
CCDC144A-209ENST00000436374 A0A0G2JLL6 359 aaPredicted RBP20.47■□□□□ 0.87
CCDC144A-209ENST00000436374 BTBD19C9JJ37 291 aa20.47■□□□□ 0.87
CCDC144A-209ENST00000436374 SP3Q02447 781 aa20.47■□□□□ 0.87
CCDC144A-209ENST00000436374 NTRK3Q16288 839 aa20.47■□□□□ 0.87
CCDC144A-209ENST00000436374 PRRT2Q7Z6L0 340 aaPredicted RBP20.47■□□□□ 0.87
CCDC144A-209ENST00000436374 ERO1AQ96HE7 468 aa20.47■□□□□ 0.87
CCDC144A-209ENST00000436374 ZCCHC17Q9NP64 241 aaKnown RBP20.47■□□□□ 0.87
CCDC144A-209ENST00000436374 MYPNQ86TC9 1320 aa20.47■□□□□ 0.87
CCDC144A-209ENST00000436374 ATAD5Q96QE3 1844 aa20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 VCAM1P19320 739 aa20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 HMGCS2P54868 508 aa20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 TRIM29Q14134 588 aa20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 ZYXQ15942 572 aaKnown RBP20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 RAB11FIP4Q86YS3 637 aa20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 TEX2Q8IWB9 1127 aa20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 PRPF38AQ8NAV1 312 aaKnown RBP20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 CCDC12Q8WUD4 166 aaPredicted RBP20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 RIOX1Q9H6W3 641 aa20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 EMILIN3Q9NT22 766 aa20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 ORC3Q9UBD5 711 aaPredicted RBP20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 CIZ1Q9ULV3 898 aaPredicted RBP20.46■□□□□ 0.87
CCDC144A-209ENST00000436374 USP17L15C9J2P7 530 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 USP17L13C9JLJ4 530 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 TMEM232C9JQI7 657 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 USP17L11C9JVI0 530 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 USP17L18D6R9N7 530 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 USP17L22D6RA61 530 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 USP17L17D6RBQ6 530 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 USP17L19D6RCP7 530 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 USP17L20D6RJB6 530 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 GJB2P29033 226 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 USP17L24Q0WX57 530 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 FAM83BQ5T0W9 1011 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 KCTD1Q719H9 257 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 SPICE1Q8N0Z3 855 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 SRBD1Q8N5C6 995 aaKnown RBP20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 SLC26A6Q9BXS9 759 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 GPCPD1Q9NPB8 672 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 HOXC10Q9NYD6 342 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 SLC45A1Q9Y2W3 748 aa20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 FRMPD2Q68DX3 1309 aaPredicted RBP20.45■□□□□ 0.86
CCDC144A-209ENST00000436374 PDE4DIPQ5VU43 2346 aa20.44■□□□□ 0.86
CCDC144A-209ENST00000436374 PHIPQ8WWQ0 1821 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms