RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 COPB2P35606 906 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 CDK8P49336 464 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 KCTD2Q14681 263 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 LRRC26Q2I0M4 334 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 C12orf60Q5U649 245 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 C16orf86Q6ZW13 317 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 SIRT2Q8IXJ6 389 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 ABRAQ8N0Z2 381 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 ATG4CQ96DT6 458 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 LRCH3Q96II8 777 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 MKNK2Q9HBH9 465 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 ECHDC1Q9NTX5 307 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 FLRT1Q9NZU1 646 aa9.29□□□□□ -0.92
VPS50-203ENST00000436177 ISY1Q9ULR0 285 aaKnown RBP9.29□□□□□ -0.92
VPS50-203ENST00000436177 DDX60LQ5H9U9 1706 aaKnown RBP9.28□□□□□ -0.92
VPS50-203ENST00000436177 CDK5RAP2Q96SN8 1893 aa9.28□□□□□ -0.92
VPS50-203ENST00000436177 SOX1O00570 391 aaPredicted RBP9.28□□□□□ -0.92
VPS50-203ENST00000436177 SEPT4O43236 478 aa9.28□□□□□ -0.92
VPS50-203ENST00000436177 APPP05067 770 aa9.28□□□□□ -0.92
VPS50-203ENST00000436177 CYBAP13498 195 aa9.28□□□□□ -0.92
VPS50-203ENST00000436177 TDO2P48775 406 aa9.28□□□□□ -0.92
VPS50-203ENST00000436177 MDM2Q00987 491 aaPredicted RBP9.28□□□□□ -0.92
VPS50-203ENST00000436177 DEFB123Q8N688 67 aa9.28□□□□□ -0.92
VPS50-203ENST00000436177 SLC17A8Q8NDX2 589 aa9.28□□□□□ -0.92
VPS50-203ENST00000436177 NPLOC4Q8TAT6 608 aa9.28□□□□□ -0.92
VPS50-203ENST00000436177 MMP19Q99542 508 aa9.28□□□□□ -0.92
VPS50-203ENST00000436177 ATP11BQ9Y2G3 1177 aa9.28□□□□□ -0.92
VPS50-203ENST00000436177 LAMA3Q16787 3333 aa9.28□□□□□ -0.92
VPS50-203ENST00000436177 MINDY4BA8MYZ0 360 aa9.27□□□□□ -0.93
VPS50-203ENST00000436177 SMARCA5O60264 1052 aaPredicted RBP9.27□□□□□ -0.93
VPS50-203ENST00000436177 ZFYP08048 801 aaPredicted RBP9.27□□□□□ -0.93
VPS50-203ENST00000436177 RARBP10826 455 aa9.27□□□□□ -0.93
VPS50-203ENST00000436177 EEF2P13639 858 aaKnown RBP9.27□□□□□ -0.93
VPS50-203ENST00000436177 RTP1P59025 263 aa9.27□□□□□ -0.93
VPS50-203ENST00000436177 LRIT3Q3SXY7 679 aa9.27□□□□□ -0.93
VPS50-203ENST00000436177 SLFNL1Q499Z3 407 aa9.27□□□□□ -0.93
VPS50-203ENST00000436177 FAM83BQ5T0W9 1011 aa9.27□□□□□ -0.93
VPS50-203ENST00000436177 GJC2Q5T442 439 aaPredicted RBP9.27□□□□□ -0.93
VPS50-203ENST00000436177 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
VPS50-203ENST00000436177 NACAP1Q9BZK3 213 aa9.27□□□□□ -0.93
VPS50-203ENST00000436177 PRDM5Q9NQX1 630 aaPredicted RBP9.27□□□□□ -0.93
VPS50-203ENST00000436177 CNPY2Q9Y2B0 182 aa9.27□□□□□ -0.93
VPS50-203ENST00000436177 MYO5AQ9Y4I1 1855 aaKnown RBP9.27□□□□□ -0.93
VPS50-203ENST00000436177 VWA5AO00534 786 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 ERC2O15083 957 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 COBLO75128 1261 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 SLC3A2P08195 630 aaKnown RBP9.26□□□□□ -0.93
VPS50-203ENST00000436177 GNAT2P19087 354 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 STAT3P40763 770 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 SLC4A3P48751 1232 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 TMEM132BQ14DG7 1078 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 ANO1Q5XXA6 986 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 GIMAP6Q6P9H5 292 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 CTR9Q6PD62 1173 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 STK11IPQ8N1F8 1099 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 KBTBD3Q8NAB2 608 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 OXER1Q8TDS5 423 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 APPBP2Q92624 585 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 DDX11Q96FC9 970 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 MAML3Q96JK9 1138 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 SLF1Q9BQI6 1058 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 TEX13BQ9BXU2 312 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 PUS7LQ9H0K6 701 aaKnown RBP9.26□□□□□ -0.93
VPS50-203ENST00000436177 XPNPEP3Q9NQH7 507 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 NRBP1Q9UHY1 535 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 PPP1R9AQ9ULJ8 1098 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 PLXNB2O15031 1838 aa9.26□□□□□ -0.93
VPS50-203ENST00000436177 SZT2Q5T011 3432 aa9.25□□□□□ -0.93
VPS50-203ENST00000436177 RNF113AO15541 343 aaKnown RBP9.25□□□□□ -0.93
VPS50-203ENST00000436177 KIAA1755Q5JYT7 1200 aa9.25□□□□□ -0.93
VPS50-203ENST00000436177 PPP1R15BQ5SWA1 713 aa9.25□□□□□ -0.93
VPS50-203ENST00000436177 C20orf194Q5TEA3 1177 aa9.25□□□□□ -0.93
VPS50-203ENST00000436177 RNF180Q86T96 592 aa9.25□□□□□ -0.93
VPS50-203ENST00000436177 RIOX2Q8IUF8 465 aa9.25□□□□□ -0.93
VPS50-203ENST00000436177 ZNF444Q8N0Y2 327 aaPredicted RBP9.25□□□□□ -0.93
VPS50-203ENST00000436177 TRPV1Q8NER1 839 aa9.25□□□□□ -0.93
VPS50-203ENST00000436177 STRBPQ96SI9 672 aaKnown RBP9.25□□□□□ -0.93
VPS50-203ENST00000436177 FBXO28Q9NVF7 368 aa9.25□□□□□ -0.93
VPS50-203ENST00000436177 GPAA1O43292 621 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 ZBED4O75132 1171 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 CHGBP05060 677 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 PGK2P07205 417 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 AKR1A1P14550 325 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 RASA1P20936 1047 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 ADCYAP1R1P41586 468 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 PTPN5P54829 565 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 PDE4BQ07343 736 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 IKQ13123 557 aaPredicted RBP9.24□□□□□ -0.93
VPS50-203ENST00000436177 LRRC41Q15345 812 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 TRIM60Q495X7 471 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 SBK1Q52WX2 424 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 FAM47AQ5JRC9 791 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 PRAMEF19Q5SWL8 479 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 TSHZ3Q63HK5 1081 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 SNRNP48Q6IEG0 339 aaKnown RBP9.24□□□□□ -0.93
VPS50-203ENST00000436177 SIAH1Q8IUQ4 282 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 FERMT2Q96AC1 680 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 NUP88Q99567 741 aaPredicted RBP9.24□□□□□ -0.93
VPS50-203ENST00000436177 TINF2Q9BSI4 451 aa9.24□□□□□ -0.93
VPS50-203ENST00000436177 FSD1Q9BTV5 496 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms