RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 NKX2-3Q8TAU0 364 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 KIFC2Q96AC6 838 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 TMEM47Q9BQJ4 181 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 RNF208Q9H0X6 261 aa19.14■□□□□ 0.65
SMPD4-207ENST00000435455 ZNF214Q9UL59 606 aaPredicted RBP19.14■□□□□ 0.65
SMPD4-207ENST00000435455 ZNFX1Q9P2E3 1918 aaKnown RBP19.13■□□□□ 0.65
SMPD4-207ENST00000435455 B4E1Z4 1266 aa19.13■□□□□ 0.65
SMPD4-207ENST00000435455 ATP2A1O14983 1001 aa19.13■□□□□ 0.65
SMPD4-207ENST00000435455 GJB1P08034 283 aa19.13■□□□□ 0.65
SMPD4-207ENST00000435455 HOXC6P09630 235 aa19.13■□□□□ 0.65
SMPD4-207ENST00000435455 DGKHQ86XP1 1220 aa19.13■□□□□ 0.65
SMPD4-207ENST00000435455 ESYT1Q9BSJ8 1104 aa19.13■□□□□ 0.65
SMPD4-207ENST00000435455 TEX13BQ9BXU2 312 aa19.13■□□□□ 0.65
SMPD4-207ENST00000435455 UNC93B1Q9H1C4 597 aa19.13■□□□□ 0.65
SMPD4-207ENST00000435455 SLC38A10Q9HBR0 1119 aa19.13■□□□□ 0.65
SMPD4-207ENST00000435455 TNRC18O15417 2968 aaPredicted RBP19.12■□□□□ 0.65
SMPD4-207ENST00000435455 FCER1AP12319 257 aa19.12■□□□□ 0.65
SMPD4-207ENST00000435455 EN2P19622 333 aaPredicted RBP19.12■□□□□ 0.65
SMPD4-207ENST00000435455 TRDNQ13061 729 aa19.12■□□□□ 0.65
SMPD4-207ENST00000435455 TRIB2Q92519 343 aa19.12■□□□□ 0.65
SMPD4-207ENST00000435455 MAP4K1Q92918 833 aa19.12■□□□□ 0.65
SMPD4-207ENST00000435455 PPP4R2Q9NY27 417 aa19.12■□□□□ 0.65
SMPD4-207ENST00000435455 SLC5A4Q9NY91 659 aa19.12■□□□□ 0.65
SMPD4-207ENST00000435455 ZSWIM5Q9P217 1185 aa19.12■□□□□ 0.65
SMPD4-207ENST00000435455 MTMR7Q9Y216 660 aa19.12■□□□□ 0.65
SMPD4-207ENST00000435455 BRCA2P51587 3418 aa19.12■□□□□ 0.65
SMPD4-207ENST00000435455 PDE4DIPQ5VU43 2346 aa19.12■□□□□ 0.65
SMPD4-207ENST00000435455 CYP21A2P08686 494 aa19.11■□□□□ 0.65
SMPD4-207ENST00000435455 CAPN2P17655 700 aa19.11■□□□□ 0.65
SMPD4-207ENST00000435455 ADORA2AP29274 412 aa19.11■□□□□ 0.65
SMPD4-207ENST00000435455 OAZ1P54368 228 aa19.11■□□□□ 0.65
SMPD4-207ENST00000435455 CCDC96Q2M329 555 aa19.11■□□□□ 0.65
SMPD4-207ENST00000435455 SNRNP48Q6IEG0 339 aaKnown RBP19.11■□□□□ 0.65
SMPD4-207ENST00000435455 CASC1Q6TDU7 716 aa19.11■□□□□ 0.65
SMPD4-207ENST00000435455 KCTD1Q719H9 257 aa19.11■□□□□ 0.65
SMPD4-207ENST00000435455 DPP9Q86TI2 863 aa19.11■□□□□ 0.65
SMPD4-207ENST00000435455 ZKSCAN3Q9BRR0 538 aa19.11■□□□□ 0.65
SMPD4-207ENST00000435455 RPTORQ8N122 1335 aa19.1■□□□□ 0.65
SMPD4-207ENST00000435455 GJA8P48165 433 aa19.1■□□□□ 0.65
SMPD4-207ENST00000435455 ANKS1AQ92625 1134 aa19.1■□□□□ 0.65
SMPD4-207ENST00000435455 CHMP4CQ96CF2 233 aa19.1■□□□□ 0.65
SMPD4-207ENST00000435455 ZSCAN10Q96SZ4 725 aaPredicted RBP19.1■□□□□ 0.65
SMPD4-207ENST00000435455 UBAC1Q9BSL1 405 aa19.1■□□□□ 0.65
SMPD4-207ENST00000435455 HMX1Q9NP08 348 aaPredicted RBP19.1■□□□□ 0.65
SMPD4-207ENST00000435455 RBM8AQ9Y5S9 174 aaKnown RBP19.1■□□□□ 0.65
SMPD4-207ENST00000435455 CDC45O75419 566 aa19.09■□□□□ 0.65
SMPD4-207ENST00000435455 KCTD2Q14681 263 aa19.09■□□□□ 0.65
SMPD4-207ENST00000435455 CCL14Q16627 93 aa19.09■□□□□ 0.65
SMPD4-207ENST00000435455 MAP3K21Q5TCX8 1036 aa19.09■□□□□ 0.65
SMPD4-207ENST00000435455 MFSD14CQ5VZR4 134 aa19.09■□□□□ 0.65
SMPD4-207ENST00000435455 CPXCR1Q8N123 301 aa19.09■□□□□ 0.65
SMPD4-207ENST00000435455 MMP19Q99542 508 aa19.09■□□□□ 0.65
SMPD4-207ENST00000435455 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.09■□□□□ 0.651e-6■■■■■ 32
SMPD4-207ENST00000435455 KAT14Q9H8E8 782 aa19.09■□□□□ 0.65
SMPD4-207ENST00000435455 PAK6Q9NQU5 681 aaPredicted RBP19.09■□□□□ 0.65
SMPD4-207ENST00000435455 TNKSO95271 1327 aa19.08■□□□□ 0.65
SMPD4-207ENST00000435455 PDHBP11177 359 aa19.08■□□□□ 0.64
SMPD4-207ENST00000435455 PRKAR2AP13861 404 aaKnown RBP19.08■□□□□ 0.64
SMPD4-207ENST00000435455 TRIM32Q13049 653 aa19.08■□□□□ 0.64
SMPD4-207ENST00000435455 BTNL9Q6UXG8 535 aa19.08■□□□□ 0.64
SMPD4-207ENST00000435455 RASGRP2Q7LDG7 609 aa19.08■□□□□ 0.64
SMPD4-207ENST00000435455 RALYLQ86SE5 291 aaKnown RBP19.08■□□□□ 0.64
SMPD4-207ENST00000435455 ENAHQ8N8S7 591 aaPredicted RBP19.08■□□□□ 0.64
SMPD4-207ENST00000435455 PNMA1Q8ND90 353 aa19.08■□□□□ 0.64
SMPD4-207ENST00000435455 NPLOC4Q8TAT6 608 aa19.08■□□□□ 0.64
SMPD4-207ENST00000435455 U2AF1L4Q8WU68 220 aaKnown RBP19.08■□□□□ 0.64
SMPD4-207ENST00000435455 LSG1Q9H089 658 aaKnown RBP19.08■□□□□ 0.64
SMPD4-207ENST00000435455 RAVER2Q9HCJ3 691 aaKnown RBP19.08■□□□□ 0.64
SMPD4-207ENST00000435455 FBXO40Q9UH90 709 aa19.08■□□□□ 0.64
SMPD4-207ENST00000435455 PRR12Q9ULL5 1215 aa19.08■□□□□ 0.64
SMPD4-207ENST00000435455 PLXNA1Q9UIW2 1896 aa19.07■□□□□ 0.64
SMPD4-207ENST00000435455 E7EWF7 191 aa19.07■□□□□ 0.64
SMPD4-207ENST00000435455 COBLO75128 1261 aa19.07■□□□□ 0.64
SMPD4-207ENST00000435455 SGPL1O95470 568 aa19.07■□□□□ 0.64
SMPD4-207ENST00000435455 SNHG28P0DPA3 235 aa19.07■□□□□ 0.64
SMPD4-207ENST00000435455 CACNB2Q08289 660 aaPredicted RBP19.07■□□□□ 0.64
SMPD4-207ENST00000435455 GPATCH4Q5T3I0 446 aaKnown RBP19.07■□□□□ 0.64
SMPD4-207ENST00000435455 OLFML2BQ68BL8 750 aa19.07■□□□□ 0.64
SMPD4-207ENST00000435455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMPD4-207ENST00000435455 DEFB118Q96PH6 123 aa19.07■□□□□ 0.64
SMPD4-207ENST00000435455 ANO2Q9NQ90 1003 aa19.07■□□□□ 0.64
SMPD4-207ENST00000435455 SLC4A3P48751 1232 aa19.06■□□□□ 0.64
SMPD4-207ENST00000435455 ZNF543Q08ER8 600 aa19.06■□□□□ 0.64
SMPD4-207ENST00000435455 TKFCQ3LXA3 575 aa19.06■□□□□ 0.64
SMPD4-207ENST00000435455 SYDE2Q5VT97 1194 aa19.06■□□□□ 0.64
SMPD4-207ENST00000435455 CHST13Q8NET6 341 aa19.06■□□□□ 0.64
SMPD4-207ENST00000435455 NCOA7Q8NI08 942 aa19.06■□□□□ 0.64
SMPD4-207ENST00000435455 SHISA4Q96DD7 197 aa19.06■□□□□ 0.64
SMPD4-207ENST00000435455 GPCPD1Q9NPB8 672 aa19.06■□□□□ 0.64
SMPD4-207ENST00000435455 FLRT1Q9NZU1 646 aa19.06■□□□□ 0.64
SMPD4-207ENST00000435455 RIPK3Q9Y572 518 aa19.06■□□□□ 0.64
SMPD4-207ENST00000435455 FRMPD2Q68DX3 1309 aaPredicted RBP19.05■□□□□ 0.64
SMPD4-207ENST00000435455 IFIT1BQ5T764 474 aaKnown RBP19.05■□□□□ 0.64
SMPD4-207ENST00000435455 TTBK2Q6IQ55 1244 aa19.05■□□□□ 0.64
SMPD4-207ENST00000435455 CYB5R4Q7L1T6 521 aa19.05■□□□□ 0.64
SMPD4-207ENST00000435455 DIS3Q9Y2L1 958 aaKnown RBP19.05■□□□□ 0.64
SMPD4-207ENST00000435455 IGHA2P01877 340 aa19.04■□□□□ 0.64
SMPD4-207ENST00000435455 TFRCP02786 760 aaKnown RBP19.04■□□□□ 0.64
SMPD4-207ENST00000435455 SLC16A2P36021 539 aa19.04■□□□□ 0.64
SMPD4-207ENST00000435455 SART3Q15020 963 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms