RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 ZFPM1Q8IX07 1006 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 CCDC34Q96HJ3 373 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 ABCA3Q99758 1704 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 CALM1P0DP23 149 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 CALM2P0DP24 149 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 CALM3P0DP25 149 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 TAF3Q5VWG9 929 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 NEK11Q8NG66 645 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 RBM17Q96I25 401 aaKnown RBP17.59■□□□□ 0.41
SCARF1-203ENST00000434376 SEC31AO94979 1220 aaKnown RBP17.59■□□□□ 0.41
SCARF1-203ENST00000434376 GDF11O95390 407 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 TXLNAP40222 546 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 NPY5RQ15761 445 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 IGSF22Q8N9C0 903 aa17.59■□□□□ 0.41
SCARF1-203ENST00000434376 NUP88Q99567 741 aaPredicted RBP17.59■□□□□ 0.41
SCARF1-203ENST00000434376 ABCC6O95255 1503 aa17.58■□□□□ 0.41
SCARF1-203ENST00000434376 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.41
SCARF1-203ENST00000434376 TXNRD1Q16881 649 aa17.58■□□□□ 0.41
SCARF1-203ENST00000434376 IQUBQ8NA54 791 aa17.58■□□□□ 0.41
SCARF1-203ENST00000434376 BAG1Q99933 345 aaPredicted RBP17.58■□□□□ 0.41
SCARF1-203ENST00000434376 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.4
SCARF1-203ENST00000434376 MYH3P11055 1940 aa17.58■□□□□ 0.4
SCARF1-203ENST00000434376 TMEM51Q9NW97 253 aa17.58■□□□□ 0.4
SCARF1-203ENST00000434376 COL14A1Q05707 1796 aaKnown RBP17.58■□□□□ 0.4
SCARF1-203ENST00000434376 CBFA2T2O43439 604 aa17.57■□□□□ 0.4
SCARF1-203ENST00000434376 KANSL2Q9H9L4 492 aa17.57■□□□□ 0.4
SCARF1-203ENST00000434376 DDX4Q9NQI0 724 aaKnown RBP17.57■□□□□ 0.4
SCARF1-203ENST00000434376 ANAPC4Q9UJX5 808 aa17.57■□□□□ 0.4
SCARF1-203ENST00000434376 FLT1P17948 1338 aa17.57■□□□□ 0.4
SCARF1-203ENST00000434376 COL16A1Q07092 1604 aaPredicted RBP17.57■□□□□ 0.4
SCARF1-203ENST00000434376 IRX5P78411 483 aaPredicted RBP17.57■□□□□ 0.4
SCARF1-203ENST00000434376 USH1GQ495M9 461 aa17.57■□□□□ 0.4
SCARF1-203ENST00000434376 MAD2L2Q9UI95 211 aa17.57■□□□□ 0.4
SCARF1-203ENST00000434376 DDAH1O94760 285 aa17.57■□□□□ 0.4
SCARF1-203ENST00000434376 ASIC1P78348 528 aa17.57■□□□□ 0.4
SCARF1-203ENST00000434376 BMS1Q14692 1282 aaKnown RBP17.57■□□□□ 0.4
SCARF1-203ENST00000434376 KRT27Q7Z3Y8 459 aa17.57■□□□□ 0.4
SCARF1-203ENST00000434376 TRIM34Q9BYJ4 488 aa17.57■□□□□ 0.4
SCARF1-203ENST00000434376 ZCCHC17Q9NP64 241 aaKnown RBP17.57■□□□□ 0.4
SCARF1-203ENST00000434376 LEMD3Q9Y2U8 911 aa17.57■□□□□ 0.4
SCARF1-203ENST00000434376 NEMFO60524 1076 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 CASP14P31944 242 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 TMCO3Q6UWJ1 677 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 TRIM47Q96LD4 638 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 RTFDC1Q9BY42 306 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-203ENST00000434376 DAGLAQ9Y4D2 1042 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 POTEMA6NI47 508 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 PPEF1O14829 653 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-203ENST00000434376 CLCN6P51797 869 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 MDM2Q00987 491 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-203ENST00000434376 RBL2Q08999 1139 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 TEX35Q5T0J7 233 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 CCDC150Q8NCX0 1101 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 TBCKQ8TEA7 893 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 NELFBQ8WX92 580 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 CARD6Q9BX69 1037 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 ZNF446Q9NWS9 450 aa17.56■□□□□ 0.4
SCARF1-203ENST00000434376 TNNT3P45378 269 aaPredicted RBP17.55■□□□□ 0.4
SCARF1-203ENST00000434376 DNA2P51530 1060 aa17.55■□□□□ 0.4
SCARF1-203ENST00000434376 GSTO1P78417 241 aa17.55■□□□□ 0.4
SCARF1-203ENST00000434376 LRRC41Q15345 812 aa17.55■□□□□ 0.4
SCARF1-203ENST00000434376 MTRQ99707 1265 aa17.55■□□□□ 0.4
SCARF1-203ENST00000434376 RC3H1Q5TC82 1133 aaKnown RBP17.55■□□□□ 0.4
SCARF1-203ENST00000434376 TICAM2Q86XR7 235 aa17.55■□□□□ 0.4
SCARF1-203ENST00000434376 VSTM4Q8IW00 320 aa17.55■□□□□ 0.4
SCARF1-203ENST00000434376 FNBP4Q8N3X1 1017 aaPredicted RBP17.55■□□□□ 0.4
SCARF1-203ENST00000434376 PUF60Q9UHX1 559 aaKnown RBP17.55■□□□□ 0.4
SCARF1-203ENST00000434376 SYCP1Q15431 976 aa17.55■□□□□ 0.4
SCARF1-203ENST00000434376 MLKLQ8NB16 471 aa17.55■□□□□ 0.4
SCARF1-203ENST00000434376 SLC39A2Q9NP94 309 aa17.55■□□□□ 0.4
SCARF1-203ENST00000434376 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.55■□□□□ 0.4
SCARF1-203ENST00000434376 PHLPP1O60346 1717 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 ORC4O43929 436 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 TDP2O95551 362 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 GYS2P54840 703 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 MORC3Q14149 939 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 SPECC1LQ69YQ0 1117 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 NYAP1Q6ZVC0 841 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 CCDC84Q86UT8 332 aaPredicted RBP17.54■□□□□ 0.4
SCARF1-203ENST00000434376 CERS5Q8N5B7 392 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 ACRBPQ8NEB7 543 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 TRPC5Q9UL62 973 aaPredicted RBP17.54■□□□□ 0.4
SCARF1-203ENST00000434376 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 MYH7P12883 1935 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 SEMA3EO15041 775 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 CDC25BP30305 580 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 UBXN1Q04323 297 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 POTEDQ86YR6 584 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 RRP36Q96EU6 259 aaKnown RBP17.54■□□□□ 0.4
SCARF1-203ENST00000434376 CDK5RAP3Q96JB5 506 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 PCDHA6Q9UN73 950 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 PCDHA4Q9UN74 947 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 PCDHA8Q9Y5H6 950 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 CLRN2A0PK11 232 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 USP17L15C9J2P7 530 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 USP17L13C9JLJ4 530 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 USP17L11C9JVI0 530 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 USP17L18D6R9N7 530 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 USP17L22D6RA61 530 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 USP17L17D6RBQ6 530 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms