RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 DDRGK1Q96HY6 314 aa10□□□□□ -0.81
CDH13-203ENST00000431540 TANGO6Q9C0B7 1094 aa10□□□□□ -0.81
CDH13-203ENST00000431540 DDX24Q9GZR7 859 aaKnown RBP eCLIP10□□□□□ -0.81
CDH13-203ENST00000431540 DCP1AQ9NPI6 582 aaPredicted RBP10□□□□□ -0.81
CDH13-203ENST00000431540 MCM9Q9NXL9 1143 aa10□□□□□ -0.81
CDH13-203ENST00000431540 FLRT1Q9NZU1 646 aa10□□□□□ -0.81
CDH13-203ENST00000431540 FDX1P10109 184 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 PDE6AP16499 860 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 ERCC3P19447 782 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 CNGA1P29973 690 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 SEPT2Q15019 361 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 UBE3CQ15386 1083 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 ZNF697Q5TEC3 545 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 ZSCAN25Q6NSZ9 544 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 GIMAP6Q6P9H5 292 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 RNF180Q86T96 592 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 AACSQ86V21 672 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 RIOX2Q8IUF8 465 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 MIGA1Q8NAN2 632 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 RHPN1Q8TCX5 695 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 ACER1Q8TDN7 264 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 VCPKMTQ9H867 229 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 PHF24Q9UPV7 400 aa9.99□□□□□ -0.81
CDH13-203ENST00000431540 MYH4Q9Y623 1939 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 A0A1W2PRG0 241 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 TCRBV5S4A2TA0A5A2 114 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 ATP2A1O14983 1001 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 ATP5JP18859 108 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 CYP2C19P33261 490 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 RTP1P59025 263 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 MDM2Q00987 491 aaPredicted RBP9.98□□□□□ -0.81
CDH13-203ENST00000431540 C12orf60Q5U649 245 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 WDR78Q5VTH9 848 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 ITPRIPQ8IWB1 547 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 SYMPKQ92797 1274 aaKnown RBP9.98□□□□□ -0.81
CDH13-203ENST00000431540 MAML3Q96JK9 1138 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 ANTXR1Q9H6X2 564 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 NCOR1O75376 2440 aa9.98□□□□□ -0.81
CDH13-203ENST00000431540 GREB1LQ9C091 1923 aaPredicted RBP9.97□□□□□ -0.81
CDH13-203ENST00000431540 SOWAHBA6NEL2 793 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 KIAA0355O15063 1070 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 COBLO75128 1261 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 IFIT2P09913 472 aaKnown RBP9.97□□□□□ -0.81
CDH13-203ENST00000431540 RARBP10826 455 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 LRRC41Q15345 812 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 SHROOM1Q2M3G4 852 aaPredicted RBP9.97□□□□□ -0.81
CDH13-203ENST00000431540 SBK1Q52WX2 424 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 CCDC174Q6PII3 467 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 MAMDC4Q6UXC1 1216 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 C16orf86Q6ZW13 317 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 ANKRD33Q7Z3H0 272 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 SIAH1Q8IUQ4 282 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 TRPV1Q8NER1 839 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 NUP133Q8WUM0 1156 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 TINF2Q9BSI4 451 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 SEMA6BQ9H3T3 888 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 ZNF287Q9HBT7 754 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 TLR7Q9NYK1 1049 aaKnown RBP9.97□□□□□ -0.81
CDH13-203ENST00000431540 DDX19BQ9UMR2 479 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 MROH7Q68CQ1 1323 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 ZNF532Q9HCE3 1301 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 UNC80Q8N2C7 3258 aa9.97□□□□□ -0.81
CDH13-203ENST00000431540 MOXD2PA6NHM9 499 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 MPHOSPH10O00566 681 aaKnown RBP9.96□□□□□ -0.82
CDH13-203ENST00000431540 PEX10O60683 326 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 FLOT1O75955 427 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 AKR1A1P14550 325 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 ADD2P35612 726 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 STAT3P40763 770 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 CDK8P49336 464 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 NKX3-2P78367 333 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 ICA1Q05084 483 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 KCTD2Q14681 263 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 ZYXQ15942 572 aaKnown RBP9.96□□□□□ -0.82
CDH13-203ENST00000431540 ZNF792Q3KQV3 632 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDH13-203ENST00000431540 MKL1Q969V6 931 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 PAG1Q9NWQ8 432 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 TNNQ9UQP3 1299 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 ELP1O95163 1332 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 SYNGAP1Q96PV0 1343 aa9.96□□□□□ -0.82
CDH13-203ENST00000431540 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.95□□□□□ -0.82
CDH13-203ENST00000431540 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.95□□□□□ -0.82
CDH13-203ENST00000431540 VWA5AO00534 786 aa9.95□□□□□ -0.82
CDH13-203ENST00000431540 CST5P28325 142 aaPredicted RBP9.95□□□□□ -0.82
CDH13-203ENST00000431540 OAZ1P54368 228 aa9.95□□□□□ -0.82
CDH13-203ENST00000431540 SHHQ15465 462 aa9.95□□□□□ -0.82
CDH13-203ENST00000431540 GJC2Q5T442 439 aaPredicted RBP9.95□□□□□ -0.82
CDH13-203ENST00000431540 Q7L0L9 218 aa9.95□□□□□ -0.82
CDH13-203ENST00000431540 NCAPG2Q86XI2 1143 aa9.95□□□□□ -0.82
CDH13-203ENST00000431540 PRPF38AQ8NAV1 312 aaKnown RBP9.95□□□□□ -0.82
CDH13-203ENST00000431540 PCSK9Q8NBP7 692 aaKnown RBP9.95□□□□□ -0.82
CDH13-203ENST00000431540 GUCD1Q96NT3 240 aa9.95□□□□□ -0.82
CDH13-203ENST00000431540 HAUS7Q99871 368 aa9.95□□□□□ -0.82
CDH13-203ENST00000431540 NYAP2Q9P242 653 aa9.95□□□□□ -0.82
CDH13-203ENST00000431540 FBXO40Q9UH90 709 aa9.95□□□□□ -0.82
CDH13-203ENST00000431540 RABGEF1Q9UJ41 708 aa9.95□□□□□ -0.82
CDH13-203ENST00000431540 PPP1R9AQ9ULJ8 1098 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms