RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 SEPT4O43236 478 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 TFAP4Q01664 338 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 CTDSPL2Q05D32 466 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 PRAMEF19Q5SWL8 479 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 VPS53Q5VIR6 699 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 ANO1Q5XXA6 986 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 CPXCR1Q8N123 301 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 PRPF38AQ8NAV1 312 aaKnown RBP12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 GMCL1P1Q8NEA9 526 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 MKL1Q969V6 931 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 KIFC2Q96AC6 838 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 LNPKQ9C0E8 428 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 SENP6Q9GZR1 1112 aaPredicted RBP12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 SYNPO2Q9UMS6 1093 aa12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 CTDP1Q9Y5B0 961 aaPredicted RBP12.06□□□□□ -0.48
HMGN1P38-201ENST00000431116 LTBP2Q14767 1821 aa12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 A0A0D9SFI3 127 aa12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 MAGEA10P43363 369 aaPredicted RBP12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 SLC4A3P48751 1232 aa12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 ATN1P54259 1190 aaPredicted RBP12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 AAMPQ13685 434 aa12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 GJC2Q5T442 439 aaPredicted RBP12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 SLFN13Q68D06 897 aa12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 GDF15Q99988 308 aa12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 HELLSQ9NRZ9 838 aa12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 FEM1BQ9UK73 627 aa12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.05□□□□□ -0.48
HMGN1P38-201ENST00000431116 LAMA4Q16363 1823 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 TSPY2A6NKD2 308 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 KBTBD13C9JR72 458 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 ZBED4O75132 1171 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 BMP3P12645 472 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 ZNF792Q3KQV3 632 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 B4GALNT3Q6L9W6 998 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 SMC5Q8IY18 1101 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 ARRDC4Q8NCT1 418 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 CHMP4CQ96CF2 233 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 FAM227BQ96M60 508 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 TINF2Q9BSI4 451 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 RWDD1Q9H446 243 aaPredicted RBP12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 SLC38A10Q9HBR0 1119 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 RAVER2Q9HCJ3 691 aaKnown RBP12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 NRBP1Q9UHY1 535 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 STX8Q9UNK0 236 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 DIS3Q9Y2L1 958 aaKnown RBP12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 RIPK3Q9Y572 518 aa12.04□□□□□ -0.48
HMGN1P38-201ENST00000431116 RANBP2P49792 3224 aaKnown RBP12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 TRIM6-TRIM34B2RNG4 842 aa12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 TMEM232C9JQI7 657 aa12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 SOX1O00570 391 aaPredicted RBP12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 ATP2A1O14983 1001 aa12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 RANBP6O60518 1105 aaKnown RBP12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 NMT2O60551 498 aa12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 BMP8BP34820 402 aa12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 SLC1A4P43007 532 aa12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 IKQ13123 557 aaPredicted RBP12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 NMIQ13287 307 aaPredicted RBP12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 PPP4R3BQ5MIZ7 849 aa12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 DDX11Q96FC9 970 aa12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 INCENPQ9NQS7 918 aa12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 CNPY2Q9Y2B0 182 aa12.03□□□□□ -0.48
HMGN1P38-201ENST00000431116 RARBP10826 455 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 TAL1P17542 331 aaPredicted RBP12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 STAT2P52630 851 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 OAZ1P54368 228 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 RTP1P59025 263 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 MCMDC2Q4G0Z9 681 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 RASGRP2Q7LDG7 609 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 ZNF589Q86UQ0 364 aaPredicted RBP12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 ANKRD35Q8N283 1001 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 EXOC6Q8TAG9 804 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 RILPL2Q969X0 211 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 LENG1Q96BZ8 264 aaPredicted RBP12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 GMCL1Q96IK5 515 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 UBE2OQ9C0C9 1292 aaKnown RBP12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 XPNPEP3Q9NQH7 507 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 IL17RBQ9NRM6 502 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 TOMM22Q9NS69 142 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 HOMER2Q9NSB8 354 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 ANAPC4Q9UJX5 808 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 ATP11BQ9Y2G3 1177 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 TACC3Q9Y6A5 838 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 ZMYM6O95789 1325 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 LRRC37A2A6NM11 1700 aa12.02□□□□□ -0.49
HMGN1P38-201ENST00000431116 ORC4O43929 436 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 ZNF865P0CJ78 1059 aaPredicted RBP12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 AKR1A1P14550 325 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 MCCP23508 829 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 MDM2Q00987 491 aaPredicted RBP12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 LRRC41Q15345 812 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 ALX1Q15699 326 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 RRP12Q5JTH9 1297 aaKnown RBP12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 KCTD1Q719H9 257 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 FAM160B2Q86V87 743 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 CHD1LQ86WJ1 897 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 TICAM2Q86XR7 235 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 TDHQ8IZJ6 230 aa12.01□□□□□ -0.49
HMGN1P38-201ENST00000431116 MSL3Q8N5Y2 521 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms