RNA–Protein interactions for RNA: ENST00000427463.5

PCGF3-204, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-204ENST00000427463 TINF2Q9BSI4 451 aa25.01■■□□□ 1.59
PCGF3-204ENST00000427463 NRBP1Q9UHY1 535 aa25.01■■□□□ 1.59
PCGF3-204ENST00000427463 RIPK3Q9Y572 518 aa25.01■■□□□ 1.59
PCGF3-204ENST00000427463 LAMA2P24043 3122 aaKnown RBP25■■□□□ 1.59
PCGF3-204ENST00000427463 ATP2A1O14983 1001 aa25■■□□□ 1.59
PCGF3-204ENST00000427463 TFAP4Q01664 338 aa25■■□□□ 1.59
PCGF3-204ENST00000427463 LRCH3Q96II8 777 aa25■■□□□ 1.59
PCGF3-204ENST00000427463 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25■■□□□ 1.592e-6■■■■■ 29.8
PCGF3-204ENST00000427463 KBTBD13C9JR72 458 aa24.99■■□□□ 1.59
PCGF3-204ENST00000427463 KIFC2Q96AC6 838 aa24.99■■□□□ 1.59
PCGF3-204ENST00000427463 SLC38A10Q9HBR0 1119 aa24.99■■□□□ 1.59
PCGF3-204ENST00000427463 FEM1BQ9UK73 627 aa24.99■■□□□ 1.59
PCGF3-204ENST00000427463 LRRC41Q15345 812 aa24.98■■□□□ 1.59
PCGF3-204ENST00000427463 VPS53Q5VIR6 699 aa24.98■■□□□ 1.59
PCGF3-204ENST00000427463 SLFN13Q68D06 897 aa24.98■■□□□ 1.59
PCGF3-204ENST00000427463 TDHQ8IZJ6 230 aa24.98■■□□□ 1.59
PCGF3-204ENST00000427463 CPXCR1Q8N123 301 aa24.98■■□□□ 1.59
PCGF3-204ENST00000427463 UBE2OQ9C0C9 1292 aaKnown RBP24.98■■□□□ 1.59
PCGF3-204ENST00000427463 DNAJC25-GNG10A0A024R161 153 aa24.97■■□□□ 1.59
PCGF3-204ENST00000427463 ZBED4O75132 1171 aa24.97■■□□□ 1.59
PCGF3-204ENST00000427463 TAL1P17542 331 aaPredicted RBP24.97■■□□□ 1.59
PCGF3-204ENST00000427463 RTP1P59025 263 aa24.97■■□□□ 1.59
PCGF3-204ENST00000427463 CTDSPL2Q05D32 466 aa24.97■■□□□ 1.59
PCGF3-204ENST00000427463 RAVER2Q9HCJ3 691 aaKnown RBP24.97■■□□□ 1.59
PCGF3-204ENST00000427463 COL6A3P12111 3177 aa24.97■■□□□ 1.59
PCGF3-204ENST00000427463 MYCNP04198 464 aaPredicted RBP24.96■■□□□ 1.59
PCGF3-204ENST00000427463 BMP3P12645 472 aa24.96■■□□□ 1.59
PCGF3-204ENST00000427463 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.96■■□□□ 1.596e-7■■■■□ 24.8
PCGF3-204ENST00000427463 YTHDC1Q96MU7 727 aaKnown RBP24.96■■□□□ 1.59
PCGF3-204ENST00000427463 INCENPQ9NQS7 918 aa24.96■■□□□ 1.59
PCGF3-204ENST00000427463 TACC3Q9Y6A5 838 aa24.96■■□□□ 1.59
PCGF3-204ENST00000427463 ZNF865P0CJ78 1059 aaPredicted RBP24.95■■□□□ 1.58
PCGF3-204ENST00000427463 RARBP10826 455 aa24.95■■□□□ 1.58
PCGF3-204ENST00000427463 SLC4A3P48751 1232 aa24.95■■□□□ 1.58
PCGF3-204ENST00000427463 MDM2Q00987 491 aaPredicted RBP24.95■■□□□ 1.58
PCGF3-204ENST00000427463 LRIT3Q3SXY7 679 aa24.95■■□□□ 1.58
PCGF3-204ENST00000427463 SLC39A5Q6ZMH5 540 aa24.95■■□□□ 1.58
PCGF3-204ENST00000427463 DDX11Q96FC9 970 aa24.95■■□□□ 1.58
PCGF3-204ENST00000427463 GMCL1Q96IK5 515 aa24.95■■□□□ 1.58
PCGF3-204ENST00000427463 XPNPEP3Q9NQH7 507 aa24.95■■□□□ 1.58
PCGF3-204ENST00000427463 HELLSQ9NRZ9 838 aa24.95■■□□□ 1.58
PCGF3-204ENST00000427463 ANAPC4Q9UJX5 808 aa24.95■■□□□ 1.58
PCGF3-204ENST00000427463 CTDP1Q9Y5B0 961 aaPredicted RBP24.95■■□□□ 1.58
PCGF3-204ENST00000427463 SYNGAP1Q96PV0 1343 aa24.94■■□□□ 1.58
PCGF3-204ENST00000427463 A0A0D9SFI3 127 aa24.94■■□□□ 1.58
PCGF3-204ENST00000427463 TSPY2A6NKD2 308 aa24.94■■□□□ 1.58
PCGF3-204ENST00000427463 OAZ1P54368 228 aa24.94■■□□□ 1.58
PCGF3-204ENST00000427463 AAMPQ13685 434 aa24.94■■□□□ 1.58
PCGF3-204ENST00000427463 SNX17Q15036 470 aa24.94■■□□□ 1.58
PCGF3-204ENST00000427463 MSL3Q8N5Y2 521 aaKnown RBP24.94■■□□□ 1.58
PCGF3-204ENST00000427463 FAM227BQ96M60 508 aa24.94■■□□□ 1.58
PCGF3-204ENST00000427463 LNPKQ9C0E8 428 aa24.94■■□□□ 1.58
PCGF3-204ENST00000427463 IL17RBQ9NRM6 502 aa24.94■■□□□ 1.58
PCGF3-204ENST00000427463 CNPY2Q9Y2B0 182 aa24.94■■□□□ 1.58
PCGF3-204ENST00000427463 TMEM232C9JQI7 657 aa24.93■■□□□ 1.58
PCGF3-204ENST00000427463 NMT2O60551 498 aa24.93■■□□□ 1.58
PCGF3-204ENST00000427463 AKR1A1P14550 325 aa24.93■■□□□ 1.58
PCGF3-204ENST00000427463 ADCYAP1R1P41586 468 aa24.93■■□□□ 1.58
PCGF3-204ENST00000427463 STAT2P52630 851 aa24.93■■□□□ 1.58
PCGF3-204ENST00000427463 ALX1Q15699 326 aa24.93■■□□□ 1.58
PCGF3-204ENST00000427463 PPP4R3BQ5MIZ7 849 aa24.93■■□□□ 1.58
PCGF3-204ENST00000427463 MAMDC4Q6UXC1 1216 aa24.93■■□□□ 1.58
PCGF3-204ENST00000427463 LENG1Q96BZ8 264 aaPredicted RBP24.93■■□□□ 1.58
PCGF3-204ENST00000427463 STX8Q9UNK0 236 aa24.93■■□□□ 1.58
PCGF3-204ENST00000427463 ATP11BQ9Y2G3 1177 aa24.93■■□□□ 1.58
PCGF3-204ENST00000427463 SNAI1O95863 264 aaPredicted RBP24.92■■□□□ 1.58
PCGF3-204ENST00000427463 PGK1P00558 417 aa24.92■■□□□ 1.58
PCGF3-204ENST00000427463 SLC1A4P43007 532 aa24.92■■□□□ 1.58
PCGF3-204ENST00000427463 ZNF467Q7Z7K2 595 aaPredicted RBP24.92■■□□□ 1.58
PCGF3-204ENST00000427463 TICAM2Q86XR7 235 aa24.92■■□□□ 1.58
PCGF3-204ENST00000427463 SMC5Q8IY18 1101 aa24.92■■□□□ 1.58
PCGF3-204ENST00000427463 CHST13Q8NET6 341 aa24.92■■□□□ 1.58
PCGF3-204ENST00000427463 FERMT2Q96AC1 680 aa24.92■■□□□ 1.58
PCGF3-204ENST00000427463 FGD4Q96M96 766 aa24.92■■□□□ 1.58
PCGF3-204ENST00000427463 FBXO40Q9UH90 709 aa24.92■■□□□ 1.58
PCGF3-204ENST00000427463 ISY1Q9ULR0 285 aaKnown RBP24.92■■□□□ 1.58
PCGF3-204ENST00000427463 PHF24Q9UPV7 400 aa24.92■■□□□ 1.58
PCGF3-204ENST00000427463 ORC4O43929 436 aa24.91■■□□□ 1.58
PCGF3-204ENST00000427463 FGRP09769 529 aa24.91■■□□□ 1.58
PCGF3-204ENST00000427463 FDX1P10109 184 aa24.91■■□□□ 1.58
PCGF3-204ENST00000427463 MCCP23508 829 aa24.91■■□□□ 1.58
PCGF3-204ENST00000427463 TRIM60Q495X7 471 aa24.91■■□□□ 1.58
PCGF3-204ENST00000427463 MCMDC2Q4G0Z9 681 aa24.91■■□□□ 1.58
PCGF3-204ENST00000427463 FAM160B2Q86V87 743 aa24.91■■□□□ 1.58
PCGF3-204ENST00000427463 LAMA4Q16363 1823 aa24.91■■□□□ 1.58
PCGF3-204ENST00000427463 LCTP09848 1927 aa24.9■■□□□ 1.58
PCGF3-204ENST00000427463 RANBP6O60518 1105 aaKnown RBP24.9■■□□□ 1.58
PCGF3-204ENST00000427463 NOVP48745 357 aa24.9■■□□□ 1.58
PCGF3-204ENST00000427463 C1orf53Q5VUE5 145 aa24.9■■□□□ 1.58
PCGF3-204ENST00000427463 GPR153Q6NV75 609 aa24.9■■□□□ 1.58
PCGF3-204ENST00000427463 RASGRP2Q7LDG7 609 aa24.9■■□□□ 1.58
PCGF3-204ENST00000427463 RNF180Q86T96 592 aa24.9■■□□□ 1.58
PCGF3-204ENST00000427463 ZNF589Q86UQ0 364 aaPredicted RBP24.9■■□□□ 1.58
PCGF3-204ENST00000427463 ANKRD35Q8N283 1001 aa24.9■■□□□ 1.58
PCGF3-204ENST00000427463 CHURC1Q8WUH1 139 aa24.9■■□□□ 1.58
PCGF3-204ENST00000427463 STAG1Q8WVM7 1258 aa24.9■■□□□ 1.58
PCGF3-204ENST00000427463 CHMP4CQ96CF2 233 aa24.9■■□□□ 1.58
PCGF3-204ENST00000427463 LBHD1Q9BQE6 289 aaPredicted RBP24.9■■□□□ 1.58
PCGF3-204ENST00000427463 HOMER2Q9NSB8 354 aa24.9■■□□□ 1.58
PCGF3-204ENST00000427463 PRKAG2Q9UGJ0 569 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms