RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 PCSK9Q8NBP7 692 aaKnown RBP11.3□□□□□ -0.6
LSG1-202ENST00000427461 GDPD5Q8WTR4 605 aa11.3□□□□□ -0.6
LSG1-202ENST00000427461 NOL10Q9BSC4 688 aaKnown RBP11.3□□□□□ -0.6
LSG1-202ENST00000427461 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
LSG1-202ENST00000427461 TRPV6Q9H1D0 765 aa11.3□□□□□ -0.6
LSG1-202ENST00000427461 ZHX1Q9UKY1 873 aaPredicted RBP11.3□□□□□ -0.6
LSG1-202ENST00000427461 CNPY2Q9Y2B0 182 aa11.3□□□□□ -0.6
LSG1-202ENST00000427461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.3□□□□□ -0.6
LSG1-202ENST00000427461 MYH1P12882 1939 aa11.3□□□□□ -0.6
LSG1-202ENST00000427461 SPTBN4Q9H254 2564 aa11.3□□□□□ -0.6
LSG1-202ENST00000427461 GRXCR2A6NFK2 248 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 HLA-DOAP06340 250 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 DSG3P32926 999 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 IL15P40933 162 aaPredicted RBP11.29□□□□□ -0.6
LSG1-202ENST00000427461 BEX3Q00994 111 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 TMEM132BQ14DG7 1078 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 SEPT2Q15019 361 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 ABCB5Q2M3G0 1257 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 CERKLQ49MI3 558 aaPredicted RBP11.29□□□□□ -0.6
LSG1-202ENST00000427461 GNASQ5JWF2 1037 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 DEFB128Q7Z7B8 93 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 RPUSD2Q8IZ73 545 aaKnown RBP11.29□□□□□ -0.6
LSG1-202ENST00000427461 SPATA5Q8NB90 893 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 MFSD14AQ96MC6 490 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 AGBL1Q96MI9 1066 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 LRP2BPQ9P2M1 347 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 FBXO3Q9UK99 471 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
LSG1-202ENST00000427461 PARP14Q460N5 1801 aa11.29□□□□□ -0.6
LSG1-202ENST00000427461 MYO5AQ9Y4I1 1855 aaKnown RBP11.28□□□□□ -0.6
LSG1-202ENST00000427461 CTAGE5O15320 804 aa11.28□□□□□ -0.6
LSG1-202ENST00000427461 B4GALT4O60513 344 aa11.28□□□□□ -0.6
LSG1-202ENST00000427461 BAG3O95817 575 aa11.28□□□□□ -0.6
LSG1-202ENST00000427461 PPP4CP60510 307 aa11.28□□□□□ -0.6
LSG1-202ENST00000427461 DYNLL1P63167 89 aaKnown RBP11.28□□□□□ -0.6
LSG1-202ENST00000427461 TCF15Q12870 199 aa11.28□□□□□ -0.6
LSG1-202ENST00000427461 NAA16Q6N069 864 aaPredicted RBP11.28□□□□□ -0.6
LSG1-202ENST00000427461 MB21D1Q8N884 522 aa11.28□□□□□ -0.6
LSG1-202ENST00000427461 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
LSG1-202ENST00000427461 PTPRSQ13332 1948 aa11.28□□□□□ -0.6
LSG1-202ENST00000427461 MCM3APO60318 1980 aa11.28□□□□□ -0.6
LSG1-202ENST00000427461 ZNF536O15090 1300 aa11.28□□□□□ -0.6
LSG1-202ENST00000427461 GRIN2DO15399 1336 aa11.28□□□□□ -0.6
LSG1-202ENST00000427461 LCHNA4D1U4 455 aa11.27□□□□□ -0.61
LSG1-202ENST00000427461 H3BQ06 376 aaPredicted RBP11.27□□□□□ -0.61
LSG1-202ENST00000427461 FLOT1O75955 427 aa11.27□□□□□ -0.61
LSG1-202ENST00000427461 PTPN5P54829 565 aa11.27□□□□□ -0.61
LSG1-202ENST00000427461 GJA9P57773 515 aa11.27□□□□□ -0.61
LSG1-202ENST00000427461 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.61
LSG1-202ENST00000427461 KCTD2Q14681 263 aa11.27□□□□□ -0.61
LSG1-202ENST00000427461 CXCL17Q6UXB2 119 aa11.27□□□□□ -0.61
LSG1-202ENST00000427461 ATF7IPQ6VMQ6 1270 aa11.27□□□□□ -0.61
LSG1-202ENST00000427461 SLC43A3Q8NBI5 491 aa11.27□□□□□ -0.61
LSG1-202ENST00000427461 NEUROD6Q96NK8 337 aa11.27□□□□□ -0.61
LSG1-202ENST00000427461 UPF3AQ9H1J1 476 aaKnown RBP11.27□□□□□ -0.61
LSG1-202ENST00000427461 MTUS1Q9ULD2 1270 aa11.27□□□□□ -0.61
LSG1-202ENST00000427461 ZFHX2Q9C0A1 2572 aaPredicted RBP11.27□□□□□ -0.61
LSG1-202ENST00000427461 KRT37O76014 449 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 SLC25A27O95847 323 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 PLCG2P16885 1265 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 PTGS1P23219 599 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 SHMT1P34896 483 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 MCAMP43121 646 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 ZP2Q05996 745 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 TFCP2Q12800 502 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 ITGA7Q13683 1181 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 MVPQ14764 893 aaKnown RBP11.26□□□□□ -0.61
LSG1-202ENST00000427461 CCDC144BQ3MJ40 725 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 TMCO2Q7Z6W1 182 aaPredicted RBP11.26□□□□□ -0.61
LSG1-202ENST00000427461 HERC6Q8IVU3 1022 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 SPICE1Q8N0Z3 855 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 SLC9A7Q96T83 725 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 SUGCTQ9HAC7 445 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 SPC25Q9HBM1 224 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 CABP5Q9NP86 173 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 LMCD1Q9NZU5 365 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 SERPINB13Q9UIV8 391 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 MYO15AQ9UKN7 3530 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 TECTAO75443 2155 aa11.26□□□□□ -0.61
LSG1-202ENST00000427461 RBAK-RBAKDNI3L0D1 243 aa11.25□□□□□ -0.61
LSG1-202ENST00000427461 IRS1P35568 1242 aa11.25□□□□□ -0.61
LSG1-202ENST00000427461 PSMC6P62333 389 aa11.25□□□□□ -0.61
LSG1-202ENST00000427461 DDX10Q13206 875 aaKnown RBP11.25□□□□□ -0.61
LSG1-202ENST00000427461 ACVR2BQ13705 512 aa11.25□□□□□ -0.61
LSG1-202ENST00000427461 POLA2Q14181 598 aa11.25□□□□□ -0.61
LSG1-202ENST00000427461 RIOX2Q8IUF8 465 aa11.25□□□□□ -0.61
LSG1-202ENST00000427461 SNRKQ9NRH2 765 aa11.25□□□□□ -0.61
LSG1-202ENST00000427461 FBXO28Q9NVF7 368 aa11.25□□□□□ -0.61
LSG1-202ENST00000427461 MUTYHQ9UIF7 546 aa11.25□□□□□ -0.61
LSG1-202ENST00000427461 PLXNA3P51805 1871 aa11.24□□□□□ -0.61
LSG1-202ENST00000427461 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
LSG1-202ENST00000427461 KIF28PB7ZC32 967 aa11.24□□□□□ -0.61
LSG1-202ENST00000427461 RGS20O76081 388 aa11.24□□□□□ -0.61
LSG1-202ENST00000427461 CYP2C9P11712 490 aa11.24□□□□□ -0.61
LSG1-202ENST00000427461 ARID4AP29374 1257 aaPredicted RBP11.24□□□□□ -0.61
LSG1-202ENST00000427461 PLCD1P51178 756 aa11.24□□□□□ -0.61
LSG1-202ENST00000427461 EVX2Q03828 476 aa11.24□□□□□ -0.61
LSG1-202ENST00000427461 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
LSG1-202ENST00000427461 CLEC10AQ8IUN9 316 aa11.24□□□□□ -0.61
LSG1-202ENST00000427461 PHOSPHO2Q8TCD6 241 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms