RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 COBLO75128 1261 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 IGHA2P01877 340 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 HSPD1P10809 573 aaKnown RBP12.05□□□□□ -0.48
COMMD1-202ENST00000427417 PCP11498 1178 aaKnown RBP12.05□□□□□ -0.48
COMMD1-202ENST00000427417 CTDSPL2Q05D32 466 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 NMIQ13287 307 aaPredicted RBP12.05□□□□□ -0.48
COMMD1-202ENST00000427417 TRPV1Q8NER1 839 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 REPS2Q8NFH8 660 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 KIFC2Q96AC6 838 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 MAML3Q96JK9 1138 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 NRBP1Q9UHY1 535 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 ISY1Q9ULR0 285 aaKnown RBP12.05□□□□□ -0.48
COMMD1-202ENST00000427417 ZMYND8Q9ULU4 1186 aaPredicted RBP12.05□□□□□ -0.48
COMMD1-202ENST00000427417 STX8Q9UNK0 236 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 DIS3Q9Y2L1 958 aaKnown RBP12.05□□□□□ -0.48
COMMD1-202ENST00000427417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.05□□□□□ -0.48
COMMD1-202ENST00000427417 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 CCDC171Q6TFL3 1326 aa12.05□□□□□ -0.48
COMMD1-202ENST00000427417 FGAP02671 866 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 CYBAP13498 195 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 SYN1P17600 705 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 SDSP20132 328 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 SLC1A4P43007 532 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 STAT2P52630 851 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 OAZ1P54368 228 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 ANO1Q5XXA6 986 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 SNRNP48Q6IEG0 339 aaKnown RBP12.04□□□□□ -0.48
COMMD1-202ENST00000427417 FAM160B2Q86V87 743 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 CHURC1Q8WUH1 139 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 GMCL1Q96IK5 515 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 SLC38A10Q9HBR0 1119 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 TOMM22Q9NS69 142 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 DIAPH3Q9NSV4 1193 aa12.04□□□□□ -0.48
COMMD1-202ENST00000427417 ZNFX1Q9P2E3 1918 aaKnown RBP12.03□□□□□ -0.48
COMMD1-202ENST00000427417 SEPT4O43236 478 aa12.03□□□□□ -0.48
COMMD1-202ENST00000427417 FGRP09769 529 aa12.03□□□□□ -0.48
COMMD1-202ENST00000427417 NT5C2P49902 561 aa12.03□□□□□ -0.48
COMMD1-202ENST00000427417 IKQ13123 557 aaPredicted RBP12.03□□□□□ -0.48
COMMD1-202ENST00000427417 ZNF589Q86UQ0 364 aaPredicted RBP12.03□□□□□ -0.48
COMMD1-202ENST00000427417 CPXCR1Q8N123 301 aa12.03□□□□□ -0.48
COMMD1-202ENST00000427417 MSL3Q8N5Y2 521 aaKnown RBP12.03□□□□□ -0.48
COMMD1-202ENST00000427417 ARRDC4Q8NCT1 418 aa12.03□□□□□ -0.48
COMMD1-202ENST00000427417 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
COMMD1-202ENST00000427417 CHMP4CQ96CF2 233 aa12.03□□□□□ -0.48
COMMD1-202ENST00000427417 DDX11Q96FC9 970 aa12.03□□□□□ -0.48
COMMD1-202ENST00000427417 PRO3102Q9H379 93 aa12.03□□□□□ -0.48
COMMD1-202ENST00000427417 FBXO40Q9UH90 709 aa12.03□□□□□ -0.48
COMMD1-202ENST00000427417 RANBP2P49792 3224 aaKnown RBP12.02□□□□□ -0.48
COMMD1-202ENST00000427417 TMEM232C9JQI7 657 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 DNM1LO00429 736 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 PLA2G6O60733 806 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 PGK2P07205 417 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 COL6A1P12109 1028 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 MCCP23508 829 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 NOVP48745 357 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 ZNF792Q3KQV3 632 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 RRP12Q5JTH9 1297 aaKnown RBP12.02□□□□□ -0.49
COMMD1-202ENST00000427417 PRAMEF19Q5SWL8 479 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 CWC27Q6UX04 472 aaKnown RBP12.02□□□□□ -0.49
COMMD1-202ENST00000427417 MFSD6Q6ZSS7 791 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 CHST13Q8NET6 341 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 TINF2Q9BSI4 451 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 RNF41Q9H4P4 317 aaPredicted RBP12.02□□□□□ -0.49
COMMD1-202ENST00000427417 IL17RBQ9NRM6 502 aa12.02□□□□□ -0.49
COMMD1-202ENST00000427417 KBTBD13C9JR72 458 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 ZNF213O14771 459 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 LRRC26Q2I0M4 334 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 AKNAD1Q5T1N1 836 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 RCSD1Q6JBY9 416 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.01□□□□□ -0.49
COMMD1-202ENST00000427417 ANKRD35Q8N283 1001 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 DCAF4Q8WV16 495 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 RAVER2Q9HCJ3 691 aaKnown RBP12.01□□□□□ -0.49
COMMD1-202ENST00000427417 INCENPQ9NQS7 918 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 TCP11L1Q9NUJ3 509 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 CNPY2Q9Y2B0 182 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 RIPK3Q9Y572 518 aa12.01□□□□□ -0.49
COMMD1-202ENST00000427417 PLXNA1Q9UIW2 1896 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 SZT2Q5T011 3432 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 A0A1W2PPC1 479 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 NMT2O60551 498 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 MYCNP04198 464 aaPredicted RBP12□□□□□ -0.49
COMMD1-202ENST00000427417 RARBP10826 455 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 TOP1P11387 765 aaKnown RBP12□□□□□ -0.49
COMMD1-202ENST00000427417 HAND2P61296 217 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 TKFCQ3LXA3 575 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 GJC2Q5T442 439 aaPredicted RBP12□□□□□ -0.49
COMMD1-202ENST00000427417 RASGRP2Q7LDG7 609 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 ZNF467Q7Z7K2 595 aaPredicted RBP12□□□□□ -0.49
COMMD1-202ENST00000427417 ESR2Q92731 530 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 TTC14Q96N46 770 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 SENP6Q9GZR1 1112 aaPredicted RBP12□□□□□ -0.49
COMMD1-202ENST00000427417 ACAD9Q9H845 621 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 TACC3Q9Y6A5 838 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 SYNGAP1Q96PV0 1343 aa12□□□□□ -0.49
COMMD1-202ENST00000427417 SMCHD1A6NHR9 2005 aa11.99□□□□□ -0.49
COMMD1-202ENST00000427417 DNAJC25-GNG10A0A024R161 153 aa11.99□□□□□ -0.49
COMMD1-202ENST00000427417 SOX1O00570 391 aaPredicted RBP11.99□□□□□ -0.49
COMMD1-202ENST00000427417 AKR1A1P14550 325 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms