RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 C19orf44Q9H6X5 657 aa8.6□□□□□ -1.03
C9orf3-205ENST00000427193 CWC22Q9HCG8 908 aaKnown RBP8.6□□□□□ -1.03
C9orf3-205ENST00000427193 CD320Q9NPF0 282 aa8.6□□□□□ -1.03
C9orf3-205ENST00000427193 KBTBD4Q9NVX7 518 aa8.6□□□□□ -1.03
C9orf3-205ENST00000427193 ARHGAP35Q9NRY4 1499 aa8.59□□□□□ -1.03
C9orf3-205ENST00000427193 TEKQ02763 1124 aa8.59□□□□□ -1.03
C9orf3-205ENST00000427193 LCE4AQ5TA78 99 aa8.59□□□□□ -1.03
C9orf3-205ENST00000427193 ANKS4BQ8N8V4 417 aa8.59□□□□□ -1.03
C9orf3-205ENST00000427193 KCNK12Q9HB15 430 aa8.59□□□□□ -1.03
C9orf3-205ENST00000427193 SAMD9Q5K651 1589 aa8.59□□□□□ -1.03
C9orf3-205ENST00000427193 RIMS1Q86UR5 1692 aaKnown RBP8.59□□□□□ -1.03
C9orf3-205ENST00000427193 TCAF2A6NFQ2 919 aa8.58□□□□□ -1.04
C9orf3-205ENST00000427193 ZSCAN22P10073 491 aaPredicted RBP8.58□□□□□ -1.04
C9orf3-205ENST00000427193 RNF4P78317 190 aa8.58□□□□□ -1.04
C9orf3-205ENST00000427193 SNX17Q15036 470 aa8.58□□□□□ -1.04
C9orf3-205ENST00000427193 KCNA10Q16322 511 aa8.58□□□□□ -1.04
C9orf3-205ENST00000427193 FBXL19Q6PCT2 694 aa8.58□□□□□ -1.04
C9orf3-205ENST00000427193 ATG14Q6ZNE5 492 aa8.58□□□□□ -1.04
C9orf3-205ENST00000427193 LCNL1Q6ZST4 164 aa8.58□□□□□ -1.04
C9orf3-205ENST00000427193 SUPT16HQ9Y5B9 1047 aaKnown RBP8.58□□□□□ -1.04
C9orf3-205ENST00000427193 CLIP1P30622 1438 aa8.57□□□□□ -1.04
C9orf3-205ENST00000427193 CTTNBP2Q8WZ74 1663 aa8.57□□□□□ -1.04
C9orf3-205ENST00000427193 SLC22A31A6NKX4 558 aa8.57□□□□□ -1.04
C9orf3-205ENST00000427193 NPIPB6E9PJ23 425 aa8.57□□□□□ -1.04
C9orf3-205ENST00000427193 ETV2O00321 342 aaPredicted RBP8.57□□□□□ -1.04
C9orf3-205ENST00000427193 TLR3O15455 904 aaKnown RBP8.57□□□□□ -1.04
C9orf3-205ENST00000427193 ATE1O95260 518 aa8.57□□□□□ -1.04
C9orf3-205ENST00000427193 EIF4A3P38919 411 aaKnown RBP8.57□□□□□ -1.04
C9orf3-205ENST00000427193 TIGD5Q53EQ6 642 aa8.57□□□□□ -1.04
C9orf3-205ENST00000427193 SYTL5Q8TDW5 730 aaPredicted RBP8.57□□□□□ -1.04
C9orf3-205ENST00000427193 KCNN1Q92952 543 aa8.57□□□□□ -1.04
C9orf3-205ENST00000427193 GMIPQ9P107 970 aa8.57□□□□□ -1.04
C9orf3-205ENST00000427193 YBX2Q9Y2T7 364 aaKnown RBP8.57□□□□□ -1.04
C9orf3-205ENST00000427193 ZNF281Q9Y2X9 895 aa8.57□□□□□ -1.04
C9orf3-205ENST00000427193 EFCAB5A4FU69 1503 aa8.57□□□□□ -1.04
C9orf3-205ENST00000427193 LTBP4Q8N2S1 1624 aa8.56□□□□□ -1.04
C9orf3-205ENST00000427193 GREM1O60565 184 aa8.56□□□□□ -1.04
C9orf3-205ENST00000427193 RAG1P15918 1043 aa8.56□□□□□ -1.04
C9orf3-205ENST00000427193 NMIQ13287 307 aaPredicted RBP8.56□□□□□ -1.04
C9orf3-205ENST00000427193 ARSHQ5FYA8 562 aa8.56□□□□□ -1.04
C9orf3-205ENST00000427193 INTS4Q96HW7 963 aaKnown RBP8.56□□□□□ -1.04
C9orf3-205ENST00000427193 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.56□□□□□ -1.04
C9orf3-205ENST00000427193 COPRSQ9NQ92 184 aa8.56□□□□□ -1.04
C9orf3-205ENST00000427193 PCDHB14Q9Y5E9 798 aa8.56□□□□□ -1.04
C9orf3-205ENST00000427193 PTPRTO14522 1441 aa8.55□□□□□ -1.04
C9orf3-205ENST00000427193 POGZQ7Z3K3 1410 aa8.55□□□□□ -1.04
C9orf3-205ENST00000427193 UBOX5O94941 541 aa8.55□□□□□ -1.04
C9orf3-205ENST00000427193 RNF111Q6ZNA4 994 aa8.55□□□□□ -1.04
C9orf3-205ENST00000427193 AMIGO3Q86WK7 504 aa8.55□□□□□ -1.04
C9orf3-205ENST00000427193 LINC01599Q8WXQ3 324 aa8.55□□□□□ -1.04
C9orf3-205ENST00000427193 HDAC8Q9BY41 377 aa8.55□□□□□ -1.04
C9orf3-205ENST00000427193 BRMS1Q9HCU9 246 aa8.55□□□□□ -1.04
C9orf3-205ENST00000427193 SMG5Q9UPR3 1016 aaKnown RBP8.55□□□□□ -1.04
C9orf3-205ENST00000427193 NEO1Q92859 1461 aa8.55□□□□□ -1.04
C9orf3-205ENST00000427193 FRMPD1Q5SYB0 1578 aa8.55□□□□□ -1.04
C9orf3-205ENST00000427193 PEX10O60683 326 aa8.54□□□□□ -1.04
C9orf3-205ENST00000427193 CIAPIN1Q6FI81 312 aa8.54□□□□□ -1.04
C9orf3-205ENST00000427193 DAGLBQ8NCG7 672 aa8.54□□□□□ -1.04
C9orf3-205ENST00000427193 EBF1Q9UH73 591 aa8.54□□□□□ -1.04
C9orf3-205ENST00000427193 GPR160Q9UJ42 338 aa8.54□□□□□ -1.04
C9orf3-205ENST00000427193 KIAA0556O60303 1618 aa8.54□□□□□ -1.04
C9orf3-205ENST00000427193 ARHGEF40Q8TER5 1519 aa8.54□□□□□ -1.04
C9orf3-205ENST00000427193 RAD51AP2Q09MP3 1159 aa8.53□□□□□ -1.04
C9orf3-205ENST00000427193 CDCP2Q5VXM1 449 aa8.53□□□□□ -1.04
C9orf3-205ENST00000427193 HS2ST1Q7LGA3 356 aa8.53□□□□□ -1.04
C9orf3-205ENST00000427193 ZNF655Q8N720 491 aaPredicted RBP8.53□□□□□ -1.04
C9orf3-205ENST00000427193 G6PC3Q9BUM1 346 aa8.53□□□□□ -1.04
C9orf3-205ENST00000427193 GZF1Q9H116 711 aaPredicted RBP8.53□□□□□ -1.04
C9orf3-205ENST00000427193 EHMT1Q9H9B1 1298 aa8.53□□□□□ -1.04
C9orf3-205ENST00000427193 SETD1BQ9UPS6 1966 aaKnown RBP8.53□□□□□ -1.04
C9orf3-205ENST00000427193 STRCQ7RTU9 1775 aa8.53□□□□□ -1.04
C9orf3-205ENST00000427193 PREX1Q8TCU6 1659 aa8.53□□□□□ -1.04
C9orf3-205ENST00000427193 TTC37Q6PGP7 1564 aa8.52□□□□□ -1.04
C9orf3-205ENST00000427193 FANCAO15360 1455 aa8.52□□□□□ -1.05
C9orf3-205ENST00000427193 SEMA7AO75326 666 aa8.52□□□□□ -1.05
C9orf3-205ENST00000427193 CCNFP41002 786 aa8.52□□□□□ -1.05
C9orf3-205ENST00000427193 LINC00310P59036 64 aa8.52□□□□□ -1.05
C9orf3-205ENST00000427193 NBPF9Q3BBW0 867 aa8.52□□□□□ -1.05
C9orf3-205ENST00000427193 ZNF326Q5BKZ1 582 aaKnown RBP8.52□□□□□ -1.05
C9orf3-205ENST00000427193 NBPF12Q5TAG4 269 aaPredicted RBP8.52□□□□□ -1.05
C9orf3-205ENST00000427193 OVOS1Q6IE37 1185 aa8.52□□□□□ -1.05
C9orf3-205ENST00000427193 ZNF605Q86T29 641 aa8.52□□□□□ -1.05
C9orf3-205ENST00000427193 USHBP1Q8N6Y0 703 aa8.52□□□□□ -1.05
C9orf3-205ENST00000427193 ZNF296Q8WUU4 475 aaPredicted RBP8.52□□□□□ -1.05
C9orf3-205ENST00000427193 MCOLN1Q9GZU1 580 aa8.52□□□□□ -1.05
C9orf3-205ENST00000427193 BCL11AQ9H165 835 aa8.52□□□□□ -1.05
C9orf3-205ENST00000427193 ZNF552Q9H707 407 aaPredicted RBP8.52□□□□□ -1.05
C9orf3-205ENST00000427193 ABCA9Q8IUA7 1624 aa8.51□□□□□ -1.05
C9orf3-205ENST00000427193 PSPNO60542 156 aa8.51□□□□□ -1.05
C9orf3-205ENST00000427193 RPL10P27635 214 aaKnown RBP8.51□□□□□ -1.05
C9orf3-205ENST00000427193 REXO1Q8N1G1 1221 aaKnown RBP8.51□□□□□ -1.05
C9orf3-205ENST00000427193 SHISA4Q96DD7 197 aa8.51□□□□□ -1.05
C9orf3-205ENST00000427193 TCTN2Q96GX1 697 aa8.51□□□□□ -1.05
C9orf3-205ENST00000427193 BCL2L13Q9BXK5 485 aa8.51□□□□□ -1.05
C9orf3-205ENST00000427193 CNNM2Q9H8M5 875 aa8.51□□□□□ -1.05
C9orf3-205ENST00000427193 GGT7Q9UJ14 662 aa8.51□□□□□ -1.05
C9orf3-205ENST00000427193 ABCA8O94911 1581 aa8.51□□□□□ -1.05
C9orf3-205ENST00000427193 MYOCOSA0A1B0GUC4 107 aa8.5□□□□□ -1.05
C9orf3-205ENST00000427193 PDE6BP35913 854 aa8.5□□□□□ -1.05
C9orf3-205ENST00000427193 KIR2DL1P43626 348 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms