RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 RNF208Q9H0X6 261 aa17.43■□□□□ 0.38
FAM3A-209ENST00000421517 RAD21O60216 631 aa17.42■□□□□ 0.38
FAM3A-209ENST00000421517 NMT2O60551 498 aa17.42■□□□□ 0.38
FAM3A-209ENST00000421517 ECM2O94769 699 aaPredicted RBP17.42■□□□□ 0.38
FAM3A-209ENST00000421517 SGPL1O95470 568 aa17.42■□□□□ 0.38
FAM3A-209ENST00000421517 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
FAM3A-209ENST00000421517 FCER1AP12319 257 aa17.42■□□□□ 0.38
FAM3A-209ENST00000421517 ZKSCAN1P17029 563 aaPredicted RBP17.42■□□□□ 0.38
FAM3A-209ENST00000421517 CYP2B6P20813 491 aa17.42■□□□□ 0.38
FAM3A-209ENST00000421517 RRP12Q5JTH9 1297 aaKnown RBP17.42■□□□□ 0.38
FAM3A-209ENST00000421517 NUP88Q99567 741 aaPredicted RBP17.42■□□□□ 0.38
FAM3A-209ENST00000421517 TMEM47Q9BQJ4 181 aa17.42■□□□□ 0.38
FAM3A-209ENST00000421517 CRISPLD2Q9H0B8 497 aa17.42■□□□□ 0.38
FAM3A-209ENST00000421517 HMX1Q9NP08 348 aaPredicted RBP17.42■□□□□ 0.38
FAM3A-209ENST00000421517 FBXO40Q9UH90 709 aa17.42■□□□□ 0.38
FAM3A-209ENST00000421517 NEDD4P46934 1319 aa17.42■□□□□ 0.38
FAM3A-209ENST00000421517 TMEM232C9JQI7 657 aa17.41■□□□□ 0.38
FAM3A-209ENST00000421517 ADORA2AP29274 412 aa17.41■□□□□ 0.38
FAM3A-209ENST00000421517 TKFCQ3LXA3 575 aa17.41■□□□□ 0.38
FAM3A-209ENST00000421517 NCAPG2Q86XI2 1143 aa17.41■□□□□ 0.38
FAM3A-209ENST00000421517 MSL3Q8N5Y2 521 aaKnown RBP17.41■□□□□ 0.38
FAM3A-209ENST00000421517 ANKLE1Q8NAG6 615 aa17.41■□□□□ 0.38
FAM3A-209ENST00000421517 CHST13Q8NET6 341 aa17.41■□□□□ 0.38
FAM3A-209ENST00000421517 MTA3Q9BTC8 594 aa17.41■□□□□ 0.38
FAM3A-209ENST00000421517 NRBP1Q9UHY1 535 aa17.41■□□□□ 0.38
FAM3A-209ENST00000421517 DOCK3Q8IZD9 2030 aa17.4■□□□□ 0.38
FAM3A-209ENST00000421517 EN2P19622 333 aaPredicted RBP17.4■□□□□ 0.38
FAM3A-209ENST00000421517 MCCP23508 829 aa17.4■□□□□ 0.38
FAM3A-209ENST00000421517 TRDNQ13061 729 aa17.4■□□□□ 0.38
FAM3A-209ENST00000421517 PLS1Q14651 629 aa17.4■□□□□ 0.38
FAM3A-209ENST00000421517 GPATCH4Q5T3I0 446 aaKnown RBP17.4■□□□□ 0.38
FAM3A-209ENST00000421517 MFSD14CQ5VZR4 134 aa17.4■□□□□ 0.38
FAM3A-209ENST00000421517 DPP9Q86TI2 863 aa17.4■□□□□ 0.38
FAM3A-209ENST00000421517 U2AF1L4Q8WU68 220 aaKnown RBP17.4■□□□□ 0.38
FAM3A-209ENST00000421517 ZSCAN10Q96SZ4 725 aaPredicted RBP17.4■□□□□ 0.38
FAM3A-209ENST00000421517 MAF1Q9H063 256 aa17.4■□□□□ 0.38
FAM3A-209ENST00000421517 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.4■□□□□ 0.38
FAM3A-209ENST00000421517 UNC93B1Q9H1C4 597 aa17.4■□□□□ 0.38
FAM3A-209ENST00000421517 ZSWIM5Q9P217 1185 aa17.4■□□□□ 0.38
FAM3A-209ENST00000421517 MSCO60682 206 aa17.39■□□□□ 0.37
FAM3A-209ENST00000421517 KDM4AO75164 1064 aa17.39■□□□□ 0.37
FAM3A-209ENST00000421517 CYP21A2P08686 494 aa17.39■□□□□ 0.37
FAM3A-209ENST00000421517 PDHBP11177 359 aa17.39■□□□□ 0.37
FAM3A-209ENST00000421517 KCTD2Q14681 263 aa17.39■□□□□ 0.37
FAM3A-209ENST00000421517 WDR78Q5VTH9 848 aa17.39■□□□□ 0.37
FAM3A-209ENST00000421517 KIAA1211Q6ZU35 1233 aa17.39■□□□□ 0.37
FAM3A-209ENST00000421517 UBE2Q1Q7Z7E8 422 aa17.39■□□□□ 0.37
FAM3A-209ENST00000421517 KIFC2Q96AC6 838 aa17.39■□□□□ 0.37
FAM3A-209ENST00000421517 CTDP1Q9Y5B0 961 aaPredicted RBP17.39■□□□□ 0.37
FAM3A-209ENST00000421517 PTH1RQ03431 593 aa17.38■□□□□ 0.37
FAM3A-209ENST00000421517 SNRNP48Q6IEG0 339 aaKnown RBP17.38■□□□□ 0.37
FAM3A-209ENST00000421517 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
FAM3A-209ENST00000421517 ZNF467Q7Z7K2 595 aaPredicted RBP17.38■□□□□ 0.37
FAM3A-209ENST00000421517 SHISA4Q96DD7 197 aa17.38■□□□□ 0.37
FAM3A-209ENST00000421517 ESYT1Q9BSJ8 1104 aa17.38■□□□□ 0.37
FAM3A-209ENST00000421517 B4E1Z4 1266 aa17.37■□□□□ 0.37
FAM3A-209ENST00000421517 PRKAR2AP13861 404 aaKnown RBP17.37■□□□□ 0.37
FAM3A-209ENST00000421517 CACNB2Q08289 660 aaPredicted RBP17.37■□□□□ 0.37
FAM3A-209ENST00000421517 ZNF543Q08ER8 600 aa17.37■□□□□ 0.37
FAM3A-209ENST00000421517 NPLOC4Q8TAT6 608 aa17.37■□□□□ 0.37
FAM3A-209ENST00000421517 MMP19Q99542 508 aa17.37■□□□□ 0.37
FAM3A-209ENST00000421517 LSG1Q9H089 658 aaKnown RBP17.37■□□□□ 0.37
FAM3A-209ENST00000421517 RANBP17Q9H2T7 1088 aaKnown RBP17.37■□□□□ 0.37
FAM3A-209ENST00000421517 OGDHLQ9ULD0 1010 aa17.37■□□□□ 0.37
FAM3A-209ENST00000421517 PRR12Q9ULL5 1215 aa17.37■□□□□ 0.37
FAM3A-209ENST00000421517 DNAJC25-GNG10A0A024R161 153 aa17.36■□□□□ 0.37
FAM3A-209ENST00000421517 COBLO75128 1261 aa17.36■□□□□ 0.37
FAM3A-209ENST00000421517 CCL14Q16627 93 aa17.36■□□□□ 0.37
FAM3A-209ENST00000421517 ZNF792Q3KQV3 632 aa17.36■□□□□ 0.37
FAM3A-209ENST00000421517 KCTD1Q719H9 257 aa17.36■□□□□ 0.37
FAM3A-209ENST00000421517 ENAHQ8N8S7 591 aaPredicted RBP17.36■□□□□ 0.37
FAM3A-209ENST00000421517 PNMA1Q8ND90 353 aa17.36■□□□□ 0.37
FAM3A-209ENST00000421517 NCOA7Q8NI08 942 aa17.36■□□□□ 0.37
FAM3A-209ENST00000421517 MAML3Q96JK9 1138 aa17.36■□□□□ 0.37
FAM3A-209ENST00000421517 UBAC1Q9BSL1 405 aa17.36■□□□□ 0.37
FAM3A-209ENST00000421517 KAT14Q9H8E8 782 aa17.36■□□□□ 0.37
FAM3A-209ENST00000421517 ZNF536O15090 1300 aa17.36■□□□□ 0.37
FAM3A-209ENST00000421517 TNRC18O15417 2968 aaPredicted RBP17.36■□□□□ 0.37
FAM3A-209ENST00000421517 COL11A1P12107 1806 aaPredicted RBP17.35■□□□□ 0.37
FAM3A-209ENST00000421517 E7EWF7 191 aa17.35■□□□□ 0.37
FAM3A-209ENST00000421517 ICAM1P05362 532 aa17.35■□□□□ 0.37
FAM3A-209ENST00000421517 NECTIN1Q15223 517 aa17.35■□□□□ 0.37
FAM3A-209ENST00000421517 SEC23AQ15436 765 aa17.35■□□□□ 0.37
FAM3A-209ENST00000421517 MAMDC4Q6UXC1 1216 aa17.35■□□□□ 0.37
FAM3A-209ENST00000421517 DEFB118Q96PH6 123 aa17.35■□□□□ 0.37
FAM3A-209ENST00000421517 PPP4R2Q9NY27 417 aa17.35■□□□□ 0.37
FAM3A-209ENST00000421517 FLRT1Q9NZU1 646 aa17.35■□□□□ 0.37
FAM3A-209ENST00000421517 RIPK3Q9Y572 518 aa17.35■□□□□ 0.37
FAM3A-209ENST00000421517 RBM8AQ9Y5S9 174 aaKnown RBP17.35■□□□□ 0.37
FAM3A-209ENST00000421517 TNKSO95271 1327 aa17.35■□□□□ 0.37
FAM3A-209ENST00000421517 LOC102724159A0A0B4J2E5 919 aa17.34■□□□□ 0.37
FAM3A-209ENST00000421517 EPB41L2O43491 1005 aaKnown RBP17.34■□□□□ 0.37
FAM3A-209ENST00000421517 CDC45O75419 566 aa17.34■□□□□ 0.37
FAM3A-209ENST00000421517 CYBAP13498 195 aa17.34■□□□□ 0.37
FAM3A-209ENST00000421517 TRIM32Q13049 653 aa17.34■□□□□ 0.37
FAM3A-209ENST00000421517 IKQ13123 557 aaPredicted RBP17.34■□□□□ 0.37
FAM3A-209ENST00000421517 SART3Q15020 963 aaKnown RBP17.34■□□□□ 0.37
FAM3A-209ENST00000421517 PWP2Q15269 919 aaKnown RBP17.34■□□□□ 0.37
FAM3A-209ENST00000421517 ASPRV1Q53RT3 343 aa17.34■□□□□ 0.37
FAM3A-209ENST00000421517 SYDE2Q5VT97 1194 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms