RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 ANKRD45Q5TZF3 282 aa25.94■■□□□ 1.74
ACTB-203ENST00000417101 SLC39A5Q6ZMH5 540 aa25.94■■□□□ 1.74
ACTB-203ENST00000417101 CPXCR1Q8N123 301 aa25.94■■□□□ 1.74
ACTB-203ENST00000417101 NEDD1Q8NHV4 660 aa25.94■■□□□ 1.74
ACTB-203ENST00000417101 LBHD1Q9BQE6 289 aaPredicted RBP25.94■■□□□ 1.74
ACTB-203ENST00000417101 RIPK3Q9Y572 518 aa25.94■■□□□ 1.74
ACTB-203ENST00000417101 CTDP1Q9Y5B0 961 aaPredicted RBP25.94■■□□□ 1.74
ACTB-203ENST00000417101 SALL3Q9BXA9 1300 aa25.93■■□□□ 1.74
ACTB-203ENST00000417101 TFAP4Q01664 338 aa25.93■■□□□ 1.74
ACTB-203ENST00000417101 PPARAQ07869 468 aa25.93■■□□□ 1.74
ACTB-203ENST00000417101 CCDC129Q6ZRS4 1044 aa25.93■■□□□ 1.74
ACTB-203ENST00000417101 DDX11Q96FC9 970 aa25.93■■□□□ 1.74
ACTB-203ENST00000417101 PRKAG2Q9UGJ0 569 aa25.93■■□□□ 1.74
ACTB-203ENST00000417101 FEM1BQ9UK73 627 aa25.93■■□□□ 1.74
ACTB-203ENST00000417101 SYNPO2Q9UMS6 1093 aa25.93■■□□□ 1.74
ACTB-203ENST00000417101 PLIN4Q96Q06 1357 aa25.93■■□□□ 1.74
ACTB-203ENST00000417101 RARBP10826 455 aa25.92■■□□□ 1.74
ACTB-203ENST00000417101 GMCL1P1Q8NEA9 526 aa25.92■■□□□ 1.74
ACTB-203ENST00000417101 FERMT2Q96AC1 680 aa25.92■■□□□ 1.74
ACTB-203ENST00000417101 RAVER2Q9HCJ3 691 aaKnown RBP25.92■■□□□ 1.74
ACTB-203ENST00000417101 XPNPEP3Q9NQH7 507 aa25.92■■□□□ 1.74
ACTB-203ENST00000417101 COL6A3P12111 3177 aa25.92■■□□□ 1.74
ACTB-203ENST00000417101 LAMA2P24043 3122 aaKnown RBP25.92■■□□□ 1.74
ACTB-203ENST00000417101 MYH4Q9Y623 1939 aa25.91■■□□□ 1.74
ACTB-203ENST00000417101 ATP2A1O14983 1001 aa25.91■■□□□ 1.74
ACTB-203ENST00000417101 SLFN13Q68D06 897 aa25.91■■□□□ 1.74
ACTB-203ENST00000417101 SLC38A10Q9HBR0 1119 aa25.91■■□□□ 1.74
ACTB-203ENST00000417101 CNPY2Q9Y2B0 182 aa25.91■■□□□ 1.74
ACTB-203ENST00000417101 FOXP2O15409 715 aa25.9■■□□□ 1.74
ACTB-203ENST00000417101 ZNF865P0CJ78 1059 aaPredicted RBP25.9■■□□□ 1.74
ACTB-203ENST00000417101 BMP3P12645 472 aa25.9■■□□□ 1.74
ACTB-203ENST00000417101 GPR153Q6NV75 609 aa25.9■■□□□ 1.74
ACTB-203ENST00000417101 ISY1Q9ULR0 285 aaKnown RBP25.9■■□□□ 1.74
ACTB-203ENST00000417101 SMCHD1A6NHR9 2005 aa25.89■■□□□ 1.74
ACTB-203ENST00000417101 PGK1P00558 417 aa25.89■■□□□ 1.74
ACTB-203ENST00000417101 TRIM60Q495X7 471 aa25.89■■□□□ 1.74
ACTB-203ENST00000417101 PLXNA1Q9UIW2 1896 aa25.89■■□□□ 1.73
ACTB-203ENST00000417101 DNAJC25-GNG10A0A024R161 153 aa25.88■■□□□ 1.73
ACTB-203ENST00000417101 AKR1A1P14550 325 aa25.88■■□□□ 1.73
ACTB-203ENST00000417101 CTDSPL2Q05D32 466 aa25.88■■□□□ 1.73
ACTB-203ENST00000417101 SNX17Q15036 470 aa25.88■■□□□ 1.73
ACTB-203ENST00000417101 RNF180Q86T96 592 aa25.88■■□□□ 1.73
ACTB-203ENST00000417101 MSL3Q8N5Y2 521 aaKnown RBP25.88■■□□□ 1.73
ACTB-203ENST00000417101 DEFB123Q8N688 67 aa25.88■■□□□ 1.73
ACTB-203ENST00000417101 LENG1Q96BZ8 264 aaPredicted RBP25.88■■□□□ 1.73
ACTB-203ENST00000417101 CHMP4CQ96CF2 233 aa25.88■■□□□ 1.73
ACTB-203ENST00000417101 EVI5LQ96CN4 794 aa25.88■■□□□ 1.73
ACTB-203ENST00000417101 PRDM5Q9NQX1 630 aaPredicted RBP25.88■■□□□ 1.73
ACTB-203ENST00000417101 TMEM232C9JQI7 657 aa25.87■■□□□ 1.73
ACTB-203ENST00000417101 PDE1AP54750 535 aa25.87■■□□□ 1.73
ACTB-203ENST00000417101 HDAC1Q13547 482 aaPredicted RBP25.87■■□□□ 1.73
ACTB-203ENST00000417101 VPS53Q5VIR6 699 aa25.87■■□□□ 1.73
ACTB-203ENST00000417101 Q7L0L9 218 aa25.87■■□□□ 1.73
ACTB-203ENST00000417101 ANKRD35Q8N283 1001 aa25.87■■□□□ 1.73
ACTB-203ENST00000417101 INCENPQ9NQS7 918 aa25.87■■□□□ 1.73
ACTB-203ENST00000417101 PHF24Q9UPV7 400 aa25.87■■□□□ 1.73
ACTB-203ENST00000417101 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.87■■□□□ 1.736e-23■□□□□ 10.4
ACTB-203ENST00000417101 SYNGAP1Q96PV0 1343 aa25.87■■□□□ 1.73
ACTB-203ENST00000417101 SNAI1O95863 264 aaPredicted RBP25.86■■□□□ 1.73
ACTB-203ENST00000417101 OAZ1P54368 228 aa25.86■■□□□ 1.73
ACTB-203ENST00000417101 FBXO40Q9UH90 709 aa25.86■■□□□ 1.73
ACTB-203ENST00000417101 TSPY2A6NKD2 308 aa25.85■■□□□ 1.73
ACTB-203ENST00000417101 IKQ13123 557 aaPredicted RBP25.85■■□□□ 1.73
ACTB-203ENST00000417101 MAMDC4Q6UXC1 1216 aa25.85■■□□□ 1.73
ACTB-203ENST00000417101 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.85■■□□□ 1.738e-20■■□□□ 12
ACTB-203ENST00000417101 CHST13Q8NET6 341 aa25.85■■□□□ 1.73
ACTB-203ENST00000417101 GMCL1Q96IK5 515 aa25.85■■□□□ 1.73
ACTB-203ENST00000417101 HOMER2Q9NSB8 354 aa25.85■■□□□ 1.73
ACTB-203ENST00000417101 ZHX1Q9UKY1 873 aaPredicted RBP25.85■■□□□ 1.73
ACTB-203ENST00000417101 STX8Q9UNK0 236 aa25.85■■□□□ 1.73
ACTB-203ENST00000417101 MCCP23508 829 aa25.84■■□□□ 1.73
ACTB-203ENST00000417101 SLC1A4P43007 532 aa25.84■■□□□ 1.73
ACTB-203ENST00000417101 STAT2P52630 851 aa25.84■■□□□ 1.73
ACTB-203ENST00000417101 TLE2Q04725 743 aa25.84■■□□□ 1.73
ACTB-203ENST00000417101 PPP4R3BQ5MIZ7 849 aa25.84■■□□□ 1.73
ACTB-203ENST00000417101 C1orf53Q5VUE5 145 aa25.84■■□□□ 1.73
ACTB-203ENST00000417101 ZNF467Q7Z7K2 595 aaPredicted RBP25.84■■□□□ 1.73
ACTB-203ENST00000417101 CHURC1Q8WUH1 139 aa25.84■■□□□ 1.73
ACTB-203ENST00000417101 PDLIM7Q9NR12 457 aa25.84■■□□□ 1.73
ACTB-203ENST00000417101 FAM184BQ9ULE4 1060 aa25.84■■□□□ 1.73
ACTB-203ENST00000417101 NMT2O60551 498 aa25.83■■□□□ 1.73
ACTB-203ENST00000417101 ADAMTS4O75173 837 aa25.83■■□□□ 1.73
ACTB-203ENST00000417101 FDX1P10109 184 aa25.83■■□□□ 1.73
ACTB-203ENST00000417101 FAM160B2Q86V87 743 aa25.83■■□□□ 1.73
ACTB-203ENST00000417101 STAG1Q8WVM7 1258 aa25.83■■□□□ 1.73
ACTB-203ENST00000417101 IL17RBQ9NRM6 502 aa25.83■■□□□ 1.73
ACTB-203ENST00000417101 HELLSQ9NRZ9 838 aa25.83■■□□□ 1.73
ACTB-203ENST00000417101 ANAPC4Q9UJX5 808 aa25.83■■□□□ 1.73
ACTB-203ENST00000417101 TACC3Q9Y6A5 838 aa25.83■■□□□ 1.73
ACTB-203ENST00000417101 RANBP6O60518 1105 aaKnown RBP25.82■■□□□ 1.72
ACTB-203ENST00000417101 SH3RF1Q7Z6J0 888 aa25.82■■□□□ 1.72
ACTB-203ENST00000417101 FAM227BQ96M60 508 aa25.82■■□□□ 1.72
ACTB-203ENST00000417101 FGD4Q96M96 766 aa25.82■■□□□ 1.72
ACTB-203ENST00000417101 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.82■■□□□ 1.72
ACTB-203ENST00000417101 SYNRGQ9UMZ2 1314 aa25.82■■□□□ 1.72
ACTB-203ENST00000417101 A0A1W2PQ45 241 aaPredicted RBP25.81■■□□□ 1.72
ACTB-203ENST00000417101 A0A1W2PQY0 241 aa25.81■■□□□ 1.72
ACTB-203ENST00000417101 TRIM43BA6NCK2 446 aa25.81■■□□□ 1.72
ACTB-203ENST00000417101 ACVR2BQ13705 512 aa25.81■■□□□ 1.72
ACTB-203ENST00000417101 ALX1Q15699 326 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms