RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 DNAJC25-GNG10A0A024R161 153 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 TRIM43BA6NCK2 446 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 ATP2A1O14983 1001 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 AKR1A1P14550 325 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 TLE2Q04725 743 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 FAM109BQ6ICB4 259 aaPredicted RBP17.68■□□□□ 0.42
RPS28-201ENST00000417088 SH3RF1Q7Z6J0 888 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 RNF180Q86T96 592 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 CPXCR1Q8N123 301 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 PI4K2BQ8TCG2 481 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 BADQ92934 168 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 TRIM43Q96BQ3 446 aaPredicted RBP17.68■□□□□ 0.42
RPS28-201ENST00000417088 DDX11Q96FC9 970 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 CEP95Q96GE4 821 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 SEC62Q99442 399 aaKnown RBP17.68■□□□□ 0.42
RPS28-201ENST00000417088 CNPY2Q9Y2B0 182 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 PCDHB15Q9Y5E8 787 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 TTC41PQ6P2S7 1318 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 LTBP2Q14767 1821 aa17.68■□□□□ 0.42
RPS28-201ENST00000417088 PLXNA1Q9UIW2 1896 aa17.67■□□□□ 0.42
RPS28-201ENST00000417088 LAMA2P24043 3122 aaKnown RBP17.67■□□□□ 0.42
RPS28-201ENST00000417088 ZBED4O75132 1171 aa17.67■□□□□ 0.42
RPS28-201ENST00000417088 SNAI1O95863 264 aaPredicted RBP17.67■□□□□ 0.42
RPS28-201ENST00000417088 SLC4A3P48751 1232 aa17.67■□□□□ 0.42
RPS28-201ENST00000417088 SHHQ15465 462 aa17.67■□□□□ 0.42
RPS28-201ENST00000417088 LRRFIP1Q32MZ4 808 aaKnown RBP17.67■□□□□ 0.42
RPS28-201ENST00000417088 C9orf50Q5SZB4 431 aa17.67■□□□□ 0.42
RPS28-201ENST00000417088 MSL3Q8N5Y2 521 aaKnown RBP17.67■□□□□ 0.42
RPS28-201ENST00000417088 OTUD7AQ8TE49 926 aaPredicted RBP17.67■□□□□ 0.42
RPS28-201ENST00000417088 KIFC2Q96AC6 838 aa17.67■□□□□ 0.42
RPS28-201ENST00000417088 LENG1Q96BZ8 264 aaPredicted RBP17.67■□□□□ 0.42
RPS28-201ENST00000417088 RAVER2Q9HCJ3 691 aaKnown RBP17.67■□□□□ 0.42
RPS28-201ENST00000417088 FEM1BQ9UK73 627 aa17.67■□□□□ 0.42
RPS28-201ENST00000417088 SYNPO2Q9UMS6 1093 aa17.67■□□□□ 0.42
RPS28-201ENST00000417088 DLL1O00548 723 aa17.66■□□□□ 0.42
RPS28-201ENST00000417088 ERC2O15083 957 aa17.66■□□□□ 0.42
RPS28-201ENST00000417088 ADAMTS4O75173 837 aa17.66■□□□□ 0.42
RPS28-201ENST00000417088 TTLL1O95922 423 aa17.66■□□□□ 0.42
RPS28-201ENST00000417088 MAMDC4Q6UXC1 1216 aa17.66■□□□□ 0.42
RPS28-201ENST00000417088 LRRC47Q8N1G4 583 aaKnown RBP17.66■□□□□ 0.42
RPS28-201ENST00000417088 GMCL1P1Q8NEA9 526 aa17.66■□□□□ 0.42
RPS28-201ENST00000417088 NEDD1Q8NHV4 660 aa17.66■□□□□ 0.42
RPS28-201ENST00000417088 NACAP1Q9BZK3 213 aa17.66■□□□□ 0.42
RPS28-201ENST00000417088 SLC38A10Q9HBR0 1119 aa17.66■□□□□ 0.42
RPS28-201ENST00000417088 SYNGAP1Q96PV0 1343 aa17.66■□□□□ 0.42
RPS28-201ENST00000417088 ZMYM1Q5SVZ6 1142 aa17.65■□□□□ 0.42
RPS28-201ENST00000417088 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.65■□□□□ 0.42
RPS28-201ENST00000417088 FAM184BQ9ULE4 1060 aa17.65■□□□□ 0.42
RPS28-201ENST00000417088 CTDP1Q9Y5B0 961 aaPredicted RBP17.65■□□□□ 0.42
RPS28-201ENST00000417088 TACC3Q9Y6A5 838 aa17.65■□□□□ 0.42
RPS28-201ENST00000417088 PLIN4Q96Q06 1357 aa17.65■□□□□ 0.42
RPS28-201ENST00000417088 CUL9Q8IWT3 2517 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 A0A1W2PQ45 241 aaPredicted RBP17.64■□□□□ 0.41
RPS28-201ENST00000417088 A0A1W2PQY0 241 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 TSPY3P0CV98 308 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 TSPY8P0CW00 308 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 ITGB8P26012 769 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 TFAP4Q01664 338 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 PDE4BQ07343 736 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 SLFN13Q68D06 897 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 ZNF467Q7Z7K2 595 aaPredicted RBP17.64■□□□□ 0.41
RPS28-201ENST00000417088 FGD4Q96M96 766 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 GUCD1Q96NT3 240 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 TSEN34Q9BSV6 310 aaKnown RBP17.64■□□□□ 0.41
RPS28-201ENST00000417088 FSD1Q9BTV5 496 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 NAPBQ9H115 298 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 MYH4Q9Y623 1939 aa17.64■□□□□ 0.41
RPS28-201ENST00000417088 CLTBP09497 229 aa17.63■□□□□ 0.41
RPS28-201ENST00000417088 BMP3P12645 472 aa17.63■□□□□ 0.41
RPS28-201ENST00000417088 ACLYP53396 1101 aa17.63■□□□□ 0.41
RPS28-201ENST00000417088 OAZ1P54368 228 aa17.63■□□□□ 0.41
RPS28-201ENST00000417088 PPARAQ07869 468 aa17.63■□□□□ 0.41
RPS28-201ENST00000417088 ANKRD35Q8N283 1001 aa17.63■□□□□ 0.41
RPS28-201ENST00000417088 KLHDC9Q8NEP7 349 aa17.63■□□□□ 0.41
RPS28-201ENST00000417088 CHST13Q8NET6 341 aa17.63■□□□□ 0.41
RPS28-201ENST00000417088 FAM161BQ96MY7 647 aa17.63■□□□□ 0.41
RPS28-201ENST00000417088 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.63■□□□□ 0.41
RPS28-201ENST00000417088 FBXO40Q9UH90 709 aa17.63■□□□□ 0.41
RPS28-201ENST00000417088 ZHX1Q9UKY1 873 aaPredicted RBP17.63■□□□□ 0.41
RPS28-201ENST00000417088 SYNRGQ9UMZ2 1314 aa17.63■□□□□ 0.41
RPS28-201ENST00000417088 KIAA0355O15063 1070 aa17.62■□□□□ 0.41
RPS28-201ENST00000417088 SLC3A2P08195 630 aaKnown RBP17.62■□□□□ 0.41
RPS28-201ENST00000417088 MX1P20591 662 aa17.62■□□□□ 0.41
RPS28-201ENST00000417088 ACVR2BQ13705 512 aa17.62■□□□□ 0.41
RPS28-201ENST00000417088 CCSAPQ6IQ19 270 aaPredicted RBP17.62■□□□□ 0.41
RPS28-201ENST00000417088 MYADML2A6NDP7 307 aa17.61■□□□□ 0.41
RPS28-201ENST00000417088 MOXD2PA6NHM9 499 aa17.61■□□□□ 0.41
RPS28-201ENST00000417088 TMEM232C9JQI7 657 aa17.61■□□□□ 0.41
RPS28-201ENST00000417088 FOXP2O15409 715 aa17.61■□□□□ 0.41
RPS28-201ENST00000417088 PQBP1O60828 265 aaKnown RBP17.61■□□□□ 0.41
RPS28-201ENST00000417088 DUSP11O75319 330 aaKnown RBP17.61■□□□□ 0.41
RPS28-201ENST00000417088 IRX5P78411 483 aaPredicted RBP17.61■□□□□ 0.41
RPS28-201ENST00000417088 KCNA10Q16322 511 aa17.61■□□□□ 0.41
RPS28-201ENST00000417088 ZNF697Q5TEC3 545 aa17.61■□□□□ 0.41
RPS28-201ENST00000417088 GMCL1Q96IK5 515 aa17.61■□□□□ 0.41
RPS28-201ENST00000417088 STARD7Q9NQZ5 370 aa17.61■□□□□ 0.41
RPS28-201ENST00000417088 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.61■□□□□ 0.41
RPS28-201ENST00000417088 SALL3Q9BXA9 1300 aa17.61■□□□□ 0.41
RPS28-201ENST00000417088 ADCY6O43306 1168 aa17.6■□□□□ 0.41
RPS28-201ENST00000417088 FDX1P10109 184 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms