RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 AKAP8O43823 692 aaKnown RBP5.77□□□□□ -1.49
TRAPPC13-203ENST00000415825 MAGEA10P43363 369 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-203ENST00000415825 NT5DC1Q5TFE4 455 aa5.77□□□□□ -1.49
TRAPPC13-203ENST00000415825 CCDC84Q86UT8 332 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-203ENST00000415825 CRELD1Q96HD1 420 aa5.77□□□□□ -1.49
TRAPPC13-203ENST00000415825 HDAC8Q9BY41 377 aa5.77□□□□□ -1.49
TRAPPC13-203ENST00000415825 SMPD4Q9NXE4 827 aa5.77□□□□□ -1.49
TRAPPC13-203ENST00000415825 ZNF281Q9Y2X9 895 aa5.77□□□□□ -1.49
TRAPPC13-203ENST00000415825 PRICKLE3O43900 615 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC13-203ENST00000415825 TFE3P19532 575 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC13-203ENST00000415825 NCKAP1LP55160 1127 aa5.76□□□□□ -1.49
TRAPPC13-203ENST00000415825 C14orf37Q86TY3 774 aa5.76□□□□□ -1.49
TRAPPC13-203ENST00000415825 LSRQ86X29 649 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC13-203ENST00000415825 REV1Q9UBZ9 1251 aa5.76□□□□□ -1.49
TRAPPC13-203ENST00000415825 SUSD2Q9UGT4 822 aa5.76□□□□□ -1.49
TRAPPC13-203ENST00000415825 PCDHA5Q9Y5H7 936 aa5.76□□□□□ -1.49
TRAPPC13-203ENST00000415825 A0A1W2PQ45 241 aaPredicted RBP5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 A0A1W2PQY0 241 aa5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 RBAK-RBAKDNI3L0D1 243 aa5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 FSHBP01225 129 aa5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 GJA9P57773 515 aa5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 RAD51AP2Q09MP3 1159 aa5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 HSF5Q4G112 596 aaPredicted RBP5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 KIF2CQ99661 725 aa5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 PLCD4Q9BRC7 762 aa5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 CDADC1Q9BWV3 514 aa5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 GPR55Q9Y2T6 319 aaPredicted RBP5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 PMF1-BGLAPU3KQ54 211 aa5.75□□□□□ -1.49
TRAPPC13-203ENST00000415825 FFAR3O14843 346 aa5.74□□□□□ -1.49
TRAPPC13-203ENST00000415825 RAG1P15918 1043 aa5.74□□□□□ -1.49
TRAPPC13-203ENST00000415825 GDF5P43026 501 aa5.74□□□□□ -1.49
TRAPPC13-203ENST00000415825 LIMS1P48059 325 aa5.74□□□□□ -1.49
TRAPPC13-203ENST00000415825 MAPKAPK2P49137 400 aa5.74□□□□□ -1.49
TRAPPC13-203ENST00000415825 HMGA2P52926 109 aa5.74□□□□□ -1.49
TRAPPC13-203ENST00000415825 FERMT3Q86UX7 667 aa5.74□□□□□ -1.49
TRAPPC13-203ENST00000415825 JAMLQ86YT9 394 aa5.74□□□□□ -1.49
TRAPPC13-203ENST00000415825 KRTAP9-8Q9BYQ0 159 aa5.74□□□□□ -1.49
TRAPPC13-203ENST00000415825 DBR1Q9UK59 544 aaKnown RBP5.74□□□□□ -1.49
TRAPPC13-203ENST00000415825 TMEM82A0PJX8 343 aa5.73□□□□□ -1.49
TRAPPC13-203ENST00000415825 ZNF200P98182 395 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC13-203ENST00000415825 CBX2Q14781 532 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC13-203ENST00000415825 USP51Q70EK9 711 aa5.73□□□□□ -1.49
TRAPPC13-203ENST00000415825 NAT16Q8N8M0 369 aa5.73□□□□□ -1.49
TRAPPC13-203ENST00000415825 TP53I13Q8NBR0 393 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC13-203ENST00000415825 VWCEQ96DN2 955 aa5.73□□□□□ -1.49
TRAPPC13-203ENST00000415825 TLR6Q9Y2C9 796 aa5.73□□□□□ -1.49
TRAPPC13-203ENST00000415825 AK5Q9Y6K8 562 aa5.73□□□□□ -1.49
TRAPPC13-203ENST00000415825 FADS2P1A8MWK0 482 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 CHURC1-FNTBB4DL54 471 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 PRPF40AO75400 957 aaKnown RBP5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 HTR3BO95264 441 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 MSL3P1P0C860 447 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 TNFRSF1AP19438 455 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 PLEKHN1Q494U1 663 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 RPTNQ6XPR3 784 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 LIPIQ6XZB0 460 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 RGS22Q8NE09 1264 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 CHST13Q8NET6 341 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 ARID3AQ99856 593 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 SPATA25Q9BR10 227 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 NOC4LQ9BVI4 516 aaKnown RBP5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 TNFRSF12AQ9NP84 129 aa5.72□□□□□ -1.49
TRAPPC13-203ENST00000415825 RGS13O14921 159 aa5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 EFEMP2O95967 443 aa5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 P4HBP07237 508 aaKnown RBP5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 CNR2P34972 360 aa5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 ADAM17P78536 824 aa5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 BBS9Q3SYG4 887 aa5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 CPZQ66K79 652 aa5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 TMC3Q7Z5M5 1100 aa5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 SLC16A11Q8NCK7 471 aa5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 GATAD2BQ8WXI9 593 aa5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 DDX1Q92499 740 aaKnown RBP5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 LOXL4Q96JB6 756 aa5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 CHST7Q9NS84 486 aa5.71□□□□□ -1.5
TRAPPC13-203ENST00000415825 SIGLEC6O43699 453 aa5.7□□□□□ -1.5
TRAPPC13-203ENST00000415825 PRAMEF1O95521 474 aa5.7□□□□□ -1.5
TRAPPC13-203ENST00000415825 FOXO4P98177 505 aa5.7□□□□□ -1.5
TRAPPC13-203ENST00000415825 NBPF9Q3BBW0 867 aa5.7□□□□□ -1.5
TRAPPC13-203ENST00000415825 ZPBP2Q6X784 338 aa5.7□□□□□ -1.5
TRAPPC13-203ENST00000415825 BNC2Q6ZN30 1099 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC13-203ENST00000415825 IMPACTQ9P2X3 320 aa5.7□□□□□ -1.5
TRAPPC13-203ENST00000415825 ACSL6Q9UKU0 697 aa5.7□□□□□ -1.5
TRAPPC13-203ENST00000415825 LMNB2Q03252 620 aa5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 PWP1Q13610 501 aa5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 TAF1CQ15572 869 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 HLA-DQA1Q5Y7H0 255 aa5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 PAQR3Q6TCH7 311 aa5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 USP48Q86UV5 1035 aa5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 RELL1Q8IUW5 271 aa5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 SORCS2Q96PQ0 1159 aa5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 RNF38Q9H0F5 515 aa5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 ANTXR1Q9H6X2 564 aa5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 FBXL21Q9UKT6 434 aa5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 PRR36Q9H6K5 1346 aa5.69□□□□□ -1.5
TRAPPC13-203ENST00000415825 OVOL3O00110 214 aa5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 MATN3O15232 486 aa5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 CLEC3AO75596 197 aa5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 CYBBP04839 570 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms