RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 PQBP1O60828 265 aaKnown RBP18.49■□□□□ 0.55
DDX56-202ENST00000415758 CHGBP05060 677 aa18.49■□□□□ 0.55
DDX56-202ENST00000415758 FOSL2P15408 326 aa18.49■□□□□ 0.55
DDX56-202ENST00000415758 ACLYP53396 1101 aa18.49■□□□□ 0.55
DDX56-202ENST00000415758 FPGSQ05932 587 aa18.49■□□□□ 0.55
DDX56-202ENST00000415758 TEX13BQ9BXU2 312 aa18.49■□□□□ 0.55
DDX56-202ENST00000415758 FAM184BQ9ULE4 1060 aa18.49■□□□□ 0.55
DDX56-202ENST00000415758 SYNRGQ9UMZ2 1314 aa18.49■□□□□ 0.55
DDX56-202ENST00000415758 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.48■□□□□ 0.55
DDX56-202ENST00000415758 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.48■□□□□ 0.55
DDX56-202ENST00000415758 DCDC2CA8MYV0 355 aa18.48■□□□□ 0.55
DDX56-202ENST00000415758 ATP2A1O14983 1001 aa18.48■□□□□ 0.55
DDX56-202ENST00000415758 SNAI1O95863 264 aaPredicted RBP18.48■□□□□ 0.55
DDX56-202ENST00000415758 SBK1Q52WX2 424 aa18.48■□□□□ 0.55
DDX56-202ENST00000415758 ZSCAN25Q6NSZ9 544 aa18.48■□□□□ 0.55
DDX56-202ENST00000415758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.48■□□□□ 0.55
DDX56-202ENST00000415758 ZNF467Q7Z7K2 595 aaPredicted RBP18.48■□□□□ 0.55
DDX56-202ENST00000415758 PRPF38AQ8NAV1 312 aaKnown RBP18.48■□□□□ 0.55
DDX56-202ENST00000415758 SLF1Q9BQI6 1058 aa18.48■□□□□ 0.55
DDX56-202ENST00000415758 PUS7LQ9H0K6 701 aaKnown RBP18.48■□□□□ 0.55
DDX56-202ENST00000415758 STARD7Q9NQZ5 370 aa18.48■□□□□ 0.55
DDX56-202ENST00000415758 NYAP2Q9P242 653 aa18.48■□□□□ 0.55
DDX56-202ENST00000415758 ARPP21Q9UBL0 812 aaPredicted RBP18.48■□□□□ 0.55
DDX56-202ENST00000415758 DDX19BQ9UMR2 479 aa18.48■□□□□ 0.55
DDX56-202ENST00000415758 DUSP11O75319 330 aaKnown RBP18.47■□□□□ 0.55
DDX56-202ENST00000415758 CST5P28325 142 aaPredicted RBP18.47■□□□□ 0.55
DDX56-202ENST00000415758 KCNA10Q16322 511 aa18.47■□□□□ 0.55
DDX56-202ENST00000415758 LENG1Q96BZ8 264 aaPredicted RBP18.47■□□□□ 0.55
DDX56-202ENST00000415758 RIPK3Q9Y572 518 aa18.47■□□□□ 0.55
DDX56-202ENST00000415758 ELP1O95163 1332 aa18.47■□□□□ 0.55
DDX56-202ENST00000415758 F5H6K3 240 aa18.46■□□□□ 0.55
DDX56-202ENST00000415758 TIMP1P01033 207 aa18.46■□□□□ 0.55
DDX56-202ENST00000415758 RASA1P20936 1047 aa18.46■□□□□ 0.55
DDX56-202ENST00000415758 CDK7P50613 346 aa18.46■□□□□ 0.55
DDX56-202ENST00000415758 KLRC3Q07444 240 aa18.46■□□□□ 0.55
DDX56-202ENST00000415758 SNRNP48Q6IEG0 339 aaKnown RBP18.46■□□□□ 0.55
DDX56-202ENST00000415758 GIMAP6Q6P9H5 292 aa18.46■□□□□ 0.55
DDX56-202ENST00000415758 SYMPKQ92797 1274 aaKnown RBP18.46■□□□□ 0.55
DDX56-202ENST00000415758 DDX11Q96FC9 970 aa18.46■□□□□ 0.55
DDX56-202ENST00000415758 STRBPQ96SI9 672 aaKnown RBP18.46■□□□□ 0.55
DDX56-202ENST00000415758 TBX21Q9UL17 535 aa18.46■□□□□ 0.55
DDX56-202ENST00000415758 TTC28Q96AY4 2481 aa18.46■□□□□ 0.55
DDX56-202ENST00000415758 RAD21O60216 631 aa18.45■□□□□ 0.54
DDX56-202ENST00000415758 DNAJB2P25686 324 aa18.45■□□□□ 0.54
DDX56-202ENST00000415758 GRIN2CQ14957 1233 aa18.45■□□□□ 0.54
DDX56-202ENST00000415758 NUP88Q99567 741 aaPredicted RBP18.45■□□□□ 0.54
DDX56-202ENST00000415758 MROH7Q68CQ1 1323 aa18.45■□□□□ 0.54
DDX56-202ENST00000415758 MUC3AQ02505 3323 aa18.44■□□□□ 0.54
DDX56-202ENST00000415758 GSG1L2A8MUP6 293 aa18.44■□□□□ 0.54
DDX56-202ENST00000415758 NDUFB10O96000 172 aa18.44■□□□□ 0.54
DDX56-202ENST00000415758 ACVR2BQ13705 512 aa18.44■□□□□ 0.54
DDX56-202ENST00000415758 MFSD5Q6N075 450 aa18.44■□□□□ 0.54
DDX56-202ENST00000415758 PCSK9Q8NBP7 692 aaKnown RBP18.44■□□□□ 0.54
DDX56-202ENST00000415758 MKL1Q969V6 931 aa18.44■□□□□ 0.54
DDX56-202ENST00000415758 GLT1D1Q96MS3 346 aa18.44■□□□□ 0.54
DDX56-202ENST00000415758 BCL11AQ9H165 835 aa18.44■□□□□ 0.54
DDX56-202ENST00000415758 CHMP4BQ9H444 224 aaKnown RBP18.44■□□□□ 0.54
DDX56-202ENST00000415758 COG6Q9Y2V7 657 aa18.44■□□□□ 0.54
DDX56-202ENST00000415758 IGKV6D-41A0A0C4DH26 115 aa18.43■□□□□ 0.54
DDX56-202ENST00000415758 GJA9P57773 515 aa18.43■□□□□ 0.54
DDX56-202ENST00000415758 NKX3-2P78367 333 aa18.43■□□□□ 0.54
DDX56-202ENST00000415758 RASIP1Q5U651 963 aa18.43■□□□□ 0.54
DDX56-202ENST00000415758 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.43■□□□□ 0.547e-8■■□□□ 14.1
DDX56-202ENST00000415758 UPF3AQ9H1J1 476 aaKnown RBP18.43■□□□□ 0.54
DDX56-202ENST00000415758 ABHD16BQ9H3Z7 469 aa18.43■□□□□ 0.54
DDX56-202ENST00000415758 ZNF576Q9H609 170 aa18.43■□□□□ 0.54
DDX56-202ENST00000415758 MKNK2Q9HBH9 465 aa18.43■□□□□ 0.54
DDX56-202ENST00000415758 SLC38A10Q9HBR0 1119 aa18.43■□□□□ 0.54
DDX56-202ENST00000415758 PRDM6Q9NQX0 595 aa18.43■□□□□ 0.54
DDX56-202ENST00000415758 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.43■□□□□ 0.54
DDX56-202ENST00000415758 SYNPO2Q9UMS6 1093 aa18.43■□□□□ 0.54
DDX56-202ENST00000415758 MYADML2A6NDP7 307 aa18.42■□□□□ 0.54
DDX56-202ENST00000415758 ZBED4O75132 1171 aa18.42■□□□□ 0.54
DDX56-202ENST00000415758 ASGR1P07306 291 aa18.42■□□□□ 0.54
DDX56-202ENST00000415758 OAZ1P54368 228 aa18.42■□□□□ 0.54
DDX56-202ENST00000415758 C16orf59Q7L2K0 433 aa18.42■□□□□ 0.54
DDX56-202ENST00000415758 CHST13Q8NET6 341 aa18.42■□□□□ 0.54
DDX56-202ENST00000415758 FGD4Q96M96 766 aa18.42■□□□□ 0.54
DDX56-202ENST00000415758 LRRCC1Q9C099 1032 aa18.42■□□□□ 0.54
DDX56-202ENST00000415758 CLIP2Q9UDT6 1046 aa18.42■□□□□ 0.54
DDX56-202ENST00000415758 FBXO40Q9UH90 709 aa18.42■□□□□ 0.54
DDX56-202ENST00000415758 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
DDX56-202ENST00000415758 MYH4Q9Y623 1939 aa18.41■□□□□ 0.54
DDX56-202ENST00000415758 MCM3APO60318 1980 aa18.41■□□□□ 0.54
DDX56-202ENST00000415758 ADCY6O43306 1168 aa18.41■□□□□ 0.54
DDX56-202ENST00000415758 C6orf222P0C671 652 aaPredicted RBP18.41■□□□□ 0.54
DDX56-202ENST00000415758 PPIGQ13427 754 aaKnown RBP eCLIP18.41■□□□□ 0.543e-8■■□□□ 12.9
DDX56-202ENST00000415758 CCDC144BQ3MJ40 725 aa18.41■□□□□ 0.54
DDX56-202ENST00000415758 TMEM240Q5SV17 173 aa18.41■□□□□ 0.54
DDX56-202ENST00000415758 CCDC174Q6PII3 467 aa18.41■□□□□ 0.54
DDX56-202ENST00000415758 CPXCR1Q8N123 301 aa18.41■□□□□ 0.54
DDX56-202ENST00000415758 TIFAQ96CG3 184 aa18.41■□□□□ 0.54
DDX56-202ENST00000415758 SPC25Q9HBM1 224 aa18.41■□□□□ 0.54
DDX56-202ENST00000415758 FEM1BQ9UK73 627 aa18.41■□□□□ 0.54
DDX56-202ENST00000415758 MINDY4BA8MYZ0 360 aa18.4■□□□□ 0.54
DDX56-202ENST00000415758 ARVCFO00192 962 aa18.4■□□□□ 0.54
DDX56-202ENST00000415758 IRX5P78411 483 aaPredicted RBP18.4■□□□□ 0.54
DDX56-202ENST00000415758 ANKRD35Q8N283 1001 aa18.4■□□□□ 0.54
DDX56-202ENST00000415758 GMCL1P1Q8NEA9 526 aa18.4■□□□□ 0.54
DDX56-202ENST00000415758 OSBP2Q969R2 916 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms