RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 RBM26Q5T8P6 1007 aaKnown RBP13.22□□□□□ -0.29
RFFL-205ENST00000415395 NOSTRINQ8IVI9 506 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 GPC2Q8N158 579 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 STAG2Q8N3U4 1231 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 BRMS1Q9HCU9 246 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 CABP5Q9NP86 173 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 GJB4Q9NTQ9 266 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 IMPACTQ9P2X3 320 aa13.22□□□□□ -0.29
RFFL-205ENST00000415395 CNOT7Q9UIV1 285 aaKnown RBP13.22□□□□□ -0.29
RFFL-205ENST00000415395 GOLGB1Q14789 3259 aaKnown RBP13.21□□□□□ -0.29
RFFL-205ENST00000415395 A0A1W2PQ27 194 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 A0A1W2PQ64 194 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 A0A1W2PQD8 194 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 KIF28PB7ZC32 967 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 UBE2Q2LH0YL09 131 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 hCG_1984214I3L0E3 225 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 CALML3P27482 149 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 DMTNQ08495 405 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 NBPF9Q3BBW0 867 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 DIS3L2Q8IYB7 885 aaKnown RBP13.21□□□□□ -0.3
RFFL-205ENST00000415395 ZNF713Q8N859 430 aaPredicted RBP13.21□□□□□ -0.3
RFFL-205ENST00000415395 KCNG4Q8TDN1 519 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 MRPS27Q92552 414 aaKnown RBP13.21□□□□□ -0.3
RFFL-205ENST00000415395 C16orf45Q96MC5 204 aaPredicted RBP13.21□□□□□ -0.3
RFFL-205ENST00000415395 USP28Q96RU2 1077 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 KCND1Q9NSA2 647 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 PGAP2Q9UHJ9 254 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 GJA3Q9Y6H8 435 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 ZNF541Q9H0D2 1346 aa13.21□□□□□ -0.3
RFFL-205ENST00000415395 BAZ2BQ9UIF8 2168 aaKnown RBP13.21□□□□□ -0.3
RFFL-205ENST00000415395 H7C1D1 291 aa13.2□□□□□ -0.3
RFFL-205ENST00000415395 KRT2P35908 639 aa13.2□□□□□ -0.3
RFFL-205ENST00000415395 ME1P48163 572 aa13.2□□□□□ -0.3
RFFL-205ENST00000415395 KIF4BQ2VIQ3 1234 aa13.2□□□□□ -0.3
RFFL-205ENST00000415395 CEP135Q66GS9 1140 aa13.2□□□□□ -0.3
RFFL-205ENST00000415395 GALNT17Q6IS24 598 aa13.2□□□□□ -0.3
RFFL-205ENST00000415395 LRRC8AQ8IWT6 810 aa13.2□□□□□ -0.3
RFFL-205ENST00000415395 CCDC148Q8NFR7 591 aa13.2□□□□□ -0.3
RFFL-205ENST00000415395 BPIFA3Q9BQP9 254 aa13.2□□□□□ -0.3
RFFL-205ENST00000415395 RIOX1Q9H6W3 641 aa13.2□□□□□ -0.3
RFFL-205ENST00000415395 ATAD5Q96QE3 1844 aa13.2□□□□□ -0.3
RFFL-205ENST00000415395 FAM196BA6NMK8 535 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 CCP110O43303 1012 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 ICA1Q05084 483 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 ZNF543Q08ER8 600 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 PTPN14Q15678 1187 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 RILPL1Q5EBL4 403 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 USP17L2Q6R6M4 530 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 LRRC47Q8N1G4 583 aaKnown RBP13.19□□□□□ -0.3
RFFL-205ENST00000415395 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 CCDC150Q8NCX0 1101 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 DCAF4Q8WV16 495 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 GINM1Q9NU53 330 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 OGFRQ9NZT2 677 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 VPS54Q9P1Q0 977 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 KCNJ14Q9UNX9 436 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 SHTN1A0MZ66 631 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 USP17L5A8MUK1 530 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 BTBD18B2RXH4 712 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 CYTH3O43739 400 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 EEF2P13639 858 aaKnown RBP13.19□□□□□ -0.3
RFFL-205ENST00000415395 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
RFFL-205ENST00000415395 ANO1Q5XXA6 986 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 ADALQ6DHV7 355 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 LINC00301Q8NCQ3 95 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 CCDC12Q8WUD4 166 aaPredicted RBP13.19□□□□□ -0.3
RFFL-205ENST00000415395 CACTINQ8WUQ7 758 aaKnown RBP13.19□□□□□ -0.3
RFFL-205ENST00000415395 HOOK2Q96ED9 719 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
RFFL-205ENST00000415395 TMEM39BQ9GZU3 492 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 GPRC5DQ9NZD1 345 aa13.19□□□□□ -0.3
RFFL-205ENST00000415395 MORC2Q9Y6X9 1032 aaPredicted RBP13.19□□□□□ -0.3
RFFL-205ENST00000415395 LRMPQ12912 555 aa13.18□□□□□ -0.3
RFFL-205ENST00000415395 RASA3Q14644 834 aa13.18□□□□□ -0.3
RFFL-205ENST00000415395 SEPT2Q15019 361 aa13.18□□□□□ -0.3
RFFL-205ENST00000415395 APOBEC3FQ8IUX4 373 aaKnown RBP13.18□□□□□ -0.3
RFFL-205ENST00000415395 DAGLBQ8NCG7 672 aa13.18□□□□□ -0.3
RFFL-205ENST00000415395 ARID3AQ99856 593 aa13.18□□□□□ -0.3
RFFL-205ENST00000415395 BARHL2Q9NY43 387 aa13.18□□□□□ -0.3
RFFL-205ENST00000415395 SEC63Q9UGP8 760 aaKnown RBP13.18□□□□□ -0.3
RFFL-205ENST00000415395 GDF11O95390 407 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 GH2P01242 217 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 SKILP12757 684 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 KCNJ6P48051 423 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
RFFL-205ENST00000415395 STK38Q15208 465 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 SLC35G1Q2M3R5 365 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 ILDR2Q71H61 639 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 CLEC10AQ8IUN9 316 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 JMYQ8N9B5 988 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 ENGASEQ8NFI3 743 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 SHISA4Q96DD7 197 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 GMCL1Q96IK5 515 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 SDF4Q9BRK5 362 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 NRBP1Q9UHY1 535 aa13.17□□□□□ -0.3
RFFL-205ENST00000415395 hCG_1642624A0A1W2PR95 340 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 SPTLC2O15270 562 aa13.16□□□□□ -0.3
RFFL-205ENST00000415395 PPP6R2O75170 966 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms