RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 E2F5Q15329 346 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 TNNI3KQ59H18 835 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 PRR5LQ6MZQ0 368 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 ALKBH2Q6NS38 261 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 DEPDC4Q8N2C3 294 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 CNBD1Q8NA66 436 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 ACRBPQ8NEB7 543 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 CCDC112Q8NEF3 446 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 KIF18AQ8NI77 898 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 MPP4Q96JB8 637 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 CYLDQ9NQC7 956 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 CNNM1Q9NRU3 951 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 SIRPGQ9P1W8 387 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 DBNLQ9UJU6 430 aaKnown RBP10.68□□□□□ -0.7
SNHG3-201ENST00000413987 FPGT-TNNI3KV9GXZ4 949 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 RIC1Q4ADV7 1423 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 TAF5LO75529 589 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 FMNL1O95466 1100 aaPredicted RBP10.68□□□□□ -0.7
SNHG3-201ENST00000413987 SERPINB2P05120 415 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 CCDC192P0DO97 292 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 TPTE2Q6XPS3 522 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 ZNF397Q8NF99 534 aaPredicted RBP10.68□□□□□ -0.7
SNHG3-201ENST00000413987 PI4K2BQ8TCG2 481 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 CELF1Q92879 486 aaKnown RBP10.68□□□□□ -0.7
SNHG3-201ENST00000413987 DBNDD2Q9BQY9 259 aa10.68□□□□□ -0.7
SNHG3-201ENST00000413987 RPAP1Q9BWH6 1393 aaPredicted RBP10.68□□□□□ -0.7
SNHG3-201ENST00000413987 LAMB2P55268 1798 aa10.67□□□□□ -0.7
SNHG3-201ENST00000413987 POLRMTO00411 1230 aaKnown RBP10.67□□□□□ -0.7
SNHG3-201ENST00000413987 TM4SF1P30408 202 aa10.67□□□□□ -0.7
SNHG3-201ENST00000413987 ADORA1P30542 326 aa10.67□□□□□ -0.7
SNHG3-201ENST00000413987 MCL1Q07820 350 aa10.67□□□□□ -0.7
SNHG3-201ENST00000413987 METTL3Q86U44 580 aaKnown RBP10.67□□□□□ -0.7
SNHG3-201ENST00000413987 ERC1Q8IUD2 1116 aa10.67□□□□□ -0.7
SNHG3-201ENST00000413987 EDC3Q96F86 508 aaKnown RBP10.67□□□□□ -0.7
SNHG3-201ENST00000413987 DEPDC7Q96QD5 511 aa10.67□□□□□ -0.7
SNHG3-201ENST00000413987 RGPD3A6NKT7 1758 aaPredicted RBP10.67□□□□□ -0.7
SNHG3-201ENST00000413987 RGPD4Q7Z3J3 1758 aa10.67□□□□□ -0.7
SNHG3-201ENST00000413987 TRIM6-TRIM34B2RNG4 842 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 TREHO43280 583 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 MMP10P09238 476 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 TNNT1P13805 278 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 GJA8P48165 433 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 RASA3Q14644 834 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 CCDC152Q4G0S7 254 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 RNF20Q5VTR2 975 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.66□□□□□ -0.7
SNHG3-201ENST00000413987 ANKMY2Q8IV38 441 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 GTF3C2Q8WUA4 911 aaPredicted RBP10.66□□□□□ -0.7
SNHG3-201ENST00000413987 NELL1Q92832 810 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 RILPL2Q969X0 211 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 SRA1Q9HD15 236 aaKnown RBP10.66□□□□□ -0.7
SNHG3-201ENST00000413987 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.66□□□□□ -0.7
SNHG3-201ENST00000413987 USP17L5A8MUK1 530 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 IPO5O00410 1097 aaKnown RBP10.66□□□□□ -0.7
SNHG3-201ENST00000413987 ZSCAN22P10073 491 aaPredicted RBP10.66□□□□□ -0.7
SNHG3-201ENST00000413987 IL15P40933 162 aaPredicted RBP10.66□□□□□ -0.7
SNHG3-201ENST00000413987 DNAJC21Q5F1R6 531 aaKnown RBP10.66□□□□□ -0.7
SNHG3-201ENST00000413987 METTL24Q5JXM2 366 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 LMBRD2Q68DH5 695 aaPredicted RBP10.66□□□□□ -0.7
SNHG3-201ENST00000413987 C16orf54Q6UWD8 224 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 CCDC73Q6ZRK6 1079 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 HOMER1Q86YM7 354 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 PGBD4Q96DM1 585 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 ESYT1Q9BSJ8 1104 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 NYXQ9GZU5 481 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 BOLA2Q9H3K6 86 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 STK32BQ9NY57 414 aa10.66□□□□□ -0.7
SNHG3-201ENST00000413987 A0A1B0GUL7 405 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 CHGBP05060 677 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 EPB42P16452 691 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 ZNF132P52740 706 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 FKBP4Q02790 459 aaKnown RBP eCLIP10.65□□□□□ -0.7
SNHG3-201ENST00000413987 DSG2Q14126 1118 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 PDXDC2PQ6P474 469 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 CFAP161Q6P656 301 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 SPC24Q8NBT2 197 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 TBC1D20Q96BZ9 403 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 NLRP3Q96P20 1036 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 PAIP2Q9BPZ3 127 aaKnown RBP10.65□□□□□ -0.7
SNHG3-201ENST00000413987 NEUROD4Q9HD90 331 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 MAFFQ9ULX9 164 aa10.65□□□□□ -0.7
SNHG3-201ENST00000413987 TULP2O00295 520 aa10.65□□□□□ -0.71
SNHG3-201ENST00000413987 MAPK8P45983 427 aa10.65□□□□□ -0.71
SNHG3-201ENST00000413987 SARSP49591 514 aaKnown RBP10.65□□□□□ -0.71
SNHG3-201ENST00000413987 RAB27AP51159 221 aa10.65□□□□□ -0.71
SNHG3-201ENST00000413987 IFT88Q13099 833 aa10.65□□□□□ -0.71
SNHG3-201ENST00000413987 KRT26Q7Z3Y9 468 aa10.65□□□□□ -0.71
SNHG3-201ENST00000413987 MPHOSPH8Q99549 860 aa10.65□□□□□ -0.71
SNHG3-201ENST00000413987 ZNF408Q9H9D4 720 aa10.65□□□□□ -0.71
SNHG3-201ENST00000413987 FAM53CQ9NYF3 392 aa10.65□□□□□ -0.71
SNHG3-201ENST00000413987 DNMT3AQ9Y6K1 912 aaPredicted RBP10.65□□□□□ -0.71
SNHG3-201ENST00000413987 OAS2P29728 719 aaKnown RBP10.64□□□□□ -0.71
SNHG3-201ENST00000413987 HOXC13P31276 330 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 PPP4R3AQ6IN85 833 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 PI16Q6UXB8 463 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 RASSF3Q86WH2 238 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 ZIM2Q9NZV7 527 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 STAP2Q9UGK3 403 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 CNPY2Q9Y2B0 182 aa10.64□□□□□ -0.71
SNHG3-201ENST00000413987 ZNF609O15014 1411 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms