RNA–Protein interactions for RNA: ENST00000409387.5

SLC3A1-205, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-205ENST00000409387 PMS2P54278 862 aa12.98□□□□□ -0.33
SLC3A1-205ENST00000409387 USH1GQ495M9 461 aa12.98□□□□□ -0.33
SLC3A1-205ENST00000409387 CCDC121Q6ZUS5 278 aa12.98□□□□□ -0.33
SLC3A1-205ENST00000409387 PPFIBP1Q86W92 1011 aa12.98□□□□□ -0.33
SLC3A1-205ENST00000409387 SLC16A10Q8TF71 515 aa12.98□□□□□ -0.33
SLC3A1-205ENST00000409387 DDX27Q96GQ7 796 aaKnown RBP12.98□□□□□ -0.33
SLC3A1-205ENST00000409387 SMNDC1O75940 238 aaKnown RBP eCLIP12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 MRPL28Q13084 256 aaKnown RBP12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 TOMM20Q15388 145 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 PTPN14Q15678 1187 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 CCDC38Q502W7 563 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 SND1Q7KZF4 910 aaKnown RBP eCLIP12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 FLCNQ8NFG4 579 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 XAGE2Q96GT9 111 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 NR1H4Q96RI1 486 aaPredicted RBP12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 YIPF3Q9GZM5 350 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 KCTD5Q9NXV2 234 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 GALNT8Q9NY28 637 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 TMA7Q9Y2S6 64 aaKnown RBP12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 ELP1O95163 1332 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 DIAPH2O60879 1101 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 GNAT1P11488 350 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 NAALADL2Q58DX5 795 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 SPAG5Q96R06 1193 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 HESX1Q9UBX0 185 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 DDX20Q9UHI6 824 aaKnown RBP12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 TRPC6Q9Y210 931 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 MARF1Q9Y4F3 1742 aaKnown RBP12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 PIK3C2AO00443 1686 aa12.97□□□□□ -0.33
SLC3A1-205ENST00000409387 C2orf81A6NN90 581 aa12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 ABLIM1O14639 778 aa12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 RPN1P04843 607 aaKnown RBP12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 PSMA3P25788 255 aa12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 ATP2B2Q01814 1243 aa12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 ZNF449Q6P9G9 518 aa12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 PAF1Q8N7H5 531 aa12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 CEP112Q8N8E3 955 aa12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 C8orf48Q96LL4 319 aa12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 UPF3BQ9BZI7 483 aaKnown RBP12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 SSH2Q76I76 1423 aa12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 RGPD1P0DJD0 1748 aa12.96□□□□□ -0.33
SLC3A1-205ENST00000409387 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 GTPBP10A4D1E9 387 aaKnown RBP12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 ZNF254O75437 659 aa12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 TMCC1O94876 653 aa12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 COL6A1P12109 1028 aa12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 UBASH3AP57075 661 aa12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 ZC3H6P61129 1189 aaKnown RBP12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 CEP85LQ5SZL2 805 aa12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 APLFQ8IW19 511 aaPredicted RBP12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 SGCDQ92629 289 aa12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 C8orf76Q96K31 380 aa12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 SEMA4AQ9H3S1 761 aa12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 DNAI1Q9UI46 699 aa12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 TBX22Q9Y458 520 aa12.96□□□□□ -0.34
SLC3A1-205ENST00000409387 SLC16A2P36021 539 aa12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 FLIIQ13045 1269 aa12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 PAK2Q13177 524 aa12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 LRRFIP1Q32MZ4 808 aaKnown RBP12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 PABPC1LQ4VXU2 614 aaKnown RBP12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 BEND6Q5SZJ8 279 aaPredicted RBP12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 GRAMD2AQ8IUY3 354 aa12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 ZNF496Q96IT1 587 aaPredicted RBP12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 CNNM2Q9H8M5 875 aa12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 HNRNPCP07910 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 SMTNP53814 917 aa12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 SKIV2LQ15477 1246 aaKnown RBP12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 PLEKHG6Q3KR16 790 aa12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 SNX32Q86XE0 403 aa12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 KIRREL3Q8IZU9 778 aa12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 SSH1Q8WYL5 1049 aa12.95□□□□□ -0.34
SLC3A1-205ENST00000409387 ZNF142P52746 1687 aaPredicted RBP12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 ATXN2Q99700 1313 aaKnown RBP12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 CARNS1A5YM72 827 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 PALM3A6NDB9 673 aaPredicted RBP12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 TEX28O15482 410 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 VIMP08670 466 aaKnown RBP12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 BNIP1Q12981 228 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 SPECC1Q5M775 1068 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 RASGRP2Q7LDG7 609 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 C16orf45Q96MC5 204 aaPredicted RBP12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 CCT7Q99832 543 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 VCPKMTQ9H867 229 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 POLG2Q9UHN1 485 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 CHD2O14647 1828 aaKnown RBP12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 M0QX08 132 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 TSPAN1O60635 241 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 PRPF40AO75400 957 aaKnown RBP12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 TNNI2P48788 182 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 ITGA7Q13683 1181 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 ZNF713Q8N859 430 aaPredicted RBP12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 GDAP1Q8TB36 358 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 UQCC2Q9BRT2 126 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 KCNF1Q9H3M0 494 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 CLIC5Q9NZA1 410 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 ATXN10Q9UBB4 475 aa12.94□□□□□ -0.34
SLC3A1-205ENST00000409387 TPCN1Q9ULQ1 816 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms