RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 CXCL9Q07325 125 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 NBPF9Q3BBW0 867 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 HSP90AA4PQ58FG1 418 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 RBM26Q5T8P6 1007 aaKnown RBP16.07■□□□□ 0.16
PRAME-205ENST00000405655 ADGRF4Q8IZF3 695 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 CSRNP1Q96S65 589 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 GMLQ99445 158 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 PLIN2Q99541 437 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 SPZ1Q9BXG8 430 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 TMEM39BQ9GZU3 492 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 JMJD4Q9H9V9 463 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 PI4KBQ9UBF8 816 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.07■□□□□ 0.162e-9■□□□□ 9.9
PRAME-205ENST00000405655 PLIN4Q96Q06 1357 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 FAM237AA0A1B0GTK4 181 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 SPDYE2BA6NHP3 402 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 SPDYE6P0CI01 402 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 GNAQP50148 359 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 RTKN2Q8IZC4 609 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 C4orf32Q8N8J7 132 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 SUPT20HQ8NEM7 779 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 RRP36Q96EU6 259 aaKnown RBP16.07■□□□□ 0.16
PRAME-205ENST00000405655 PIM2Q9P1W9 311 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 SWAP70Q9UH65 585 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 KIF13BQ9NQT8 1826 aa16.07■□□□□ 0.16
PRAME-205ENST00000405655 ASTN2O75129 1339 aaPredicted RBP16.07■□□□□ 0.16
PRAME-205ENST00000405655 GH2P01242 217 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 VIL1P09327 827 aaKnown RBP16.06■□□□□ 0.16
PRAME-205ENST00000405655 FKBP1AP62942 108 aaKnown RBP16.06■□□□□ 0.16
PRAME-205ENST00000405655 RASSF7Q02833 373 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 ZNF543Q08ER8 600 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 UBE2SQ16763 222 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 SPICE1Q8N0Z3 855 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 PSMD1Q99460 953 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 NOL7Q9UMY1 257 aaKnown RBP16.06■□□□□ 0.16
PRAME-205ENST00000405655 ACTN4O43707 911 aaKnown RBP16.06■□□□□ 0.16
PRAME-205ENST00000405655 COBLO75128 1261 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 HDLBPQ00341 1268 aaKnown RBP16.06■□□□□ 0.16
PRAME-205ENST00000405655 KIAA1755Q5JYT7 1200 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 CC2D2BQ6DHV5 1058 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 GJA10Q969M2 543 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 TRIM5Q9C035 493 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 RIOX1Q9H6W3 641 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 ANO10Q9NW15 660 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 ZNF70Q9UC06 446 aaPredicted RBP16.06■□□□□ 0.16
PRAME-205ENST00000405655 BCS1LQ9Y276 419 aa16.06■□□□□ 0.16
PRAME-205ENST00000405655 CNTNAP1P78357 1384 aa16.05■□□□□ 0.16
PRAME-205ENST00000405655 CCDC194A0A1B0GVG4 234 aa16.05■□□□□ 0.16
PRAME-205ENST00000405655 A0A1W2PRG0 241 aa16.05■□□□□ 0.16
PRAME-205ENST00000405655 NFKBIEO00221 500 aa16.05■□□□□ 0.16
PRAME-205ENST00000405655 SNHG28P0DPA3 235 aa16.05■□□□□ 0.16
PRAME-205ENST00000405655 ATP2C1P98194 919 aaPredicted RBP16.05■□□□□ 0.16
PRAME-205ENST00000405655 MRIQ9BWK5 157 aa16.05■□□□□ 0.16
PRAME-205ENST00000405655 EDIL3O43854 480 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 ECE1P42892 770 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 NLRP12P59046 1061 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 DLGAP5Q15398 846 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
PRAME-205ENST00000405655 NLGN2Q8NFZ4 835 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 TRIM34Q9BYJ4 488 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 EHD4Q9H223 541 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 SEC63Q9UGP8 760 aaKnown RBP16.04■□□□□ 0.16
PRAME-205ENST00000405655 ZNF75DP51815 510 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 ARID5BQ14865 1188 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 LETM2Q2VYF4 491 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 DALRD3Q5D0E6 543 aaKnown RBP16.04■□□□□ 0.16
PRAME-205ENST00000405655 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 ZSCAN30Q86W11 494 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 NIM1KQ8IY84 436 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 LRRC15Q8TF66 581 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 SLC16A10Q8TF71 515 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 ZMYND12Q9H0C1 365 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 BLZF1Q9H2G9 400 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 KCNF1Q9H3M0 494 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 SH3GLB2Q9NR46 395 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 FAM13BQ9NYF5 915 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 ZNRF3Q9ULT6 936 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 CEP131Q9UPN4 1083 aa16.04■□□□□ 0.16
PRAME-205ENST00000405655 CALML3P27482 149 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 ABCB5Q2M3G0 1257 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 ACER1Q8TDN7 264 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 DHX36Q9H2U1 1008 aaKnown RBP16.03■□□□□ 0.16
PRAME-205ENST00000405655 TUBE1Q9UJT0 475 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 BRCA1P38398 1863 aaKnown RBP16.03■□□□□ 0.16
PRAME-205ENST00000405655 BECN2A8MW95 431 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 ATP1A3P13637 1013 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 PTGS1P23219 599 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 ICA1Q05084 483 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 POSTNQ15063 836 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 ZYXQ15942 572 aaKnown RBP16.03■□□□□ 0.16
PRAME-205ENST00000405655 CCDC144BQ3MJ40 725 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
PRAME-205ENST00000405655 SMYD4Q8IYR2 804 aaPredicted RBP16.03■□□□□ 0.16
PRAME-205ENST00000405655 TIGD1Q96MW7 591 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 LZTS2Q9BRK4 669 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 MAN1B1Q9UKM7 699 aa16.03■□□□□ 0.16
PRAME-205ENST00000405655 GOLGA6L19H0YKK7 550 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 CCNT1O60563 726 aaKnown RBP16.02■□□□□ 0.16
PRAME-205ENST00000405655 NCAPHQ15003 741 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 KARSQ15046 597 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms