RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 STK3Q13188 491 aa19.45■□□□□ 0.7
CGREF1-206ENST00000405600 CPLX2Q6PUV4 134 aaKnown RBP19.45■□□□□ 0.7
CGREF1-206ENST00000405600 CYB5R4Q7L1T6 521 aa19.45■□□□□ 0.7
CGREF1-206ENST00000405600 UNC93B1Q9H1C4 597 aa19.45■□□□□ 0.7
CGREF1-206ENST00000405600 KANSL2Q9H9L4 492 aa19.45■□□□□ 0.7
CGREF1-206ENST00000405600 TXNRD2Q9NNW7 524 aa19.45■□□□□ 0.7
CGREF1-206ENST00000405600 RBBP6Q7Z6E9 1792 aaKnown RBP19.44■□□□□ 0.7
CGREF1-206ENST00000405600 PDE4DIPQ5VU43 2346 aa19.44■□□□□ 0.7
CGREF1-206ENST00000405600 INHAP05111 366 aa19.44■□□□□ 0.7
CGREF1-206ENST00000405600 GJB2P29033 226 aa19.44■□□□□ 0.7
CGREF1-206ENST00000405600 PDIA3P30101 505 aaKnown RBP19.44■□□□□ 0.7
CGREF1-206ENST00000405600 ATP2B2Q01814 1243 aa19.44■□□□□ 0.7
CGREF1-206ENST00000405600 COL9A3Q14050 684 aaPredicted RBP19.44■□□□□ 0.7
CGREF1-206ENST00000405600 WTAPQ15007 396 aa19.44■□□□□ 0.7
CGREF1-206ENST00000405600 NFKBIBQ15653 356 aa19.44■□□□□ 0.7
CGREF1-206ENST00000405600 Q3C1V9 767 aa19.44■□□□□ 0.7
CGREF1-206ENST00000405600 WDR78Q5VTH9 848 aa19.44■□□□□ 0.7
CGREF1-206ENST00000405600 PRPF38BQ5VTL8 546 aaKnown RBP19.44■□□□□ 0.7
CGREF1-206ENST00000405600 SAMD1Q6SPF0 538 aaPredicted RBP19.44■□□□□ 0.7
CGREF1-206ENST00000405600 SGMS1Q86VZ5 419 aa19.44■□□□□ 0.7
CGREF1-206ENST00000405600 ZNF444Q8N0Y2 327 aaPredicted RBP19.44■□□□□ 0.7
CGREF1-206ENST00000405600 GTF3C2Q8WUA4 911 aaPredicted RBP19.44■□□□□ 0.7
CGREF1-206ENST00000405600 RBPJLQ9UBG7 517 aa19.44■□□□□ 0.7
CGREF1-206ENST00000405600 DOCK3Q8IZD9 2030 aa19.43■□□□□ 0.7
CGREF1-206ENST00000405600 GOLGA8BA8MQT2 603 aa19.43■□□□□ 0.7
CGREF1-206ENST00000405600 GOLGA6L22H0YM25 854 aa19.43■□□□□ 0.7
CGREF1-206ENST00000405600 RANBP6O60518 1105 aaKnown RBP19.43■□□□□ 0.7
CGREF1-206ENST00000405600 VCAM1P19320 739 aa19.43■□□□□ 0.7
CGREF1-206ENST00000405600 CYP2B6P20813 491 aa19.43■□□□□ 0.7
CGREF1-206ENST00000405600 RASA1P20936 1047 aa19.43■□□□□ 0.7
CGREF1-206ENST00000405600 RCAN1P53805 252 aa19.43■□□□□ 0.7
CGREF1-206ENST00000405600 IGDCC4Q8TDY8 1250 aa19.43■□□□□ 0.7
CGREF1-206ENST00000405600 RPAP3Q9H6T3 665 aaPredicted RBP19.43■□□□□ 0.7
CGREF1-206ENST00000405600 MORF4L1Q9UBU8 362 aa19.43■□□□□ 0.7
CGREF1-206ENST00000405600 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.43■□□□□ 0.7
CGREF1-206ENST00000405600 CPLX1O14810 134 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 RAD21O60216 631 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 CDKL5O76039 1030 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 ERVK-9P63128 1117 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 ERVK-24P63145 666 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 PPP4R3BQ5MIZ7 849 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 CATSPERGQ6ZRH7 1159 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 CLEC10AQ8IUN9 316 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 FAM184AQ8NB25 1140 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 NKX2-3Q8TAU0 364 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 PXYLP1Q8TE99 480 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 LPAR1Q92633 364 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 TNPO1Q92973 898 aaKnown RBP19.42■□□□□ 0.7
CGREF1-206ENST00000405600 SLC12A7Q9Y666 1083 aa19.42■□□□□ 0.7
CGREF1-206ENST00000405600 A0A1W2PRG0 241 aa19.41■□□□□ 0.7
CGREF1-206ENST00000405600 SCRN1Q12765 414 aa19.41■□□□□ 0.7
CGREF1-206ENST00000405600 IRF5Q13568 498 aa19.41■□□□□ 0.7
CGREF1-206ENST00000405600 PPP2R5BQ15173 497 aa19.41■□□□□ 0.7
CGREF1-206ENST00000405600 TANGO6Q9C0B7 1094 aa19.41■□□□□ 0.7
CGREF1-206ENST00000405600 LY9Q9HBG7 655 aa19.41■□□□□ 0.7
CGREF1-206ENST00000405600 TMX2Q9Y320 296 aa19.41■□□□□ 0.7
CGREF1-206ENST00000405600 ATP6V1DQ9Y5K8 247 aa19.41■□□□□ 0.7
CGREF1-206ENST00000405600 DDX11L8A8MPP1 907 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 ZBTB43O43298 467 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 STX6O43752 255 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 BRD1O95696 1058 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 TFRCP02786 760 aaKnown RBP19.4■□□□□ 0.7
CGREF1-206ENST00000405600 GJB1P08034 283 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 LARP1BQ659C4 914 aaKnown RBP19.4■□□□□ 0.7
CGREF1-206ENST00000405600 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 CLEC17AQ6ZS10 378 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 SPICE1Q8N0Z3 855 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 U2AF1L4Q8WU68 220 aaKnown RBP19.4■□□□□ 0.7
CGREF1-206ENST00000405600 ZSCAN10Q96SZ4 725 aaPredicted RBP19.4■□□□□ 0.7
CGREF1-206ENST00000405600 NUDT12Q9BQG2 462 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 PORCNQ9H237 461 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 INCENPQ9NQS7 918 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 GJD2Q9UKL4 321 aa19.4■□□□□ 0.7
CGREF1-206ENST00000405600 BRCA2P51587 3418 aa19.39■□□□□ 0.7
CGREF1-206ENST00000405600 CCDC196A0A1B0GTZ2 297 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 TSPY2A6NKD2 308 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 TSPY3P0CV98 308 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 TSPY8P0CW00 308 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 MAPK4P31152 587 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 METAP2P50579 478 aaKnown RBP eCLIP19.39■□□□□ 0.69
CGREF1-206ENST00000405600 ST3GAL1Q11201 340 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 APOA5Q6Q788 366 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 DEFB118Q96PH6 123 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 ANP32EQ9BTT0 268 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 GOPCQ9HD26 462 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 BRPF3Q9ULD4 1205 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 SYNPO2Q9UMS6 1093 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 PLIN4Q96Q06 1357 aa19.39■□□□□ 0.69
CGREF1-206ENST00000405600 PRDM1O75626 825 aa19.38■□□□□ 0.69
CGREF1-206ENST00000405600 CALM1P0DP23 149 aa19.38■□□□□ 0.69
CGREF1-206ENST00000405600 CALM2P0DP24 149 aa19.38■□□□□ 0.69
CGREF1-206ENST00000405600 CALM3P0DP25 149 aa19.38■□□□□ 0.69
CGREF1-206ENST00000405600 EEF2P13639 858 aaKnown RBP19.38■□□□□ 0.69
CGREF1-206ENST00000405600 SYT1P21579 422 aa19.38■□□□□ 0.69
CGREF1-206ENST00000405600 GJA8P48165 433 aa19.38■□□□□ 0.69
CGREF1-206ENST00000405600 CCT2P78371 535 aaKnown RBP19.38■□□□□ 0.69
CGREF1-206ENST00000405600 TRIM32Q13049 653 aa19.38■□□□□ 0.69
CGREF1-206ENST00000405600 NBR1Q14596 966 aa19.38■□□□□ 0.69
CGREF1-206ENST00000405600 GPR142Q7Z601 462 aa19.38■□□□□ 0.69
CGREF1-206ENST00000405600 PLEKHH3Q7Z736 793 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms