RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 MYH8P13535 1937 aa21.86■■□□□ 1.09
UFD1-202ENST00000399523 MYADML2A6NDP7 307 aa21.85■■□□□ 1.09
UFD1-202ENST00000399523 MAMDC4Q6UXC1 1216 aa21.85■■□□□ 1.09
UFD1-202ENST00000399523 PCSK9Q8NBP7 692 aaKnown RBP21.85■■□□□ 1.09
UFD1-202ENST00000399523 REPS2Q8NFH8 660 aa21.85■■□□□ 1.09
UFD1-202ENST00000399523 NECAB3Q96P71 396 aaPredicted RBP21.85■■□□□ 1.09
UFD1-202ENST00000399523 DCP1AQ9NPI6 582 aaPredicted RBP21.85■■□□□ 1.09
UFD1-202ENST00000399523 FBXO28Q9NVF7 368 aa21.85■■□□□ 1.09
UFD1-202ENST00000399523 GBF1Q92538 1859 aa21.85■■□□□ 1.09
UFD1-202ENST00000399523 TRANK1O15050 2925 aa21.85■■□□□ 1.09
UFD1-202ENST00000399523 ARVCFO00192 962 aa21.84■■□□□ 1.09
UFD1-202ENST00000399523 BCAR3O75815 825 aa21.84■■□□□ 1.09
UFD1-202ENST00000399523 AKR1B1P15121 316 aa21.84■■□□□ 1.09
UFD1-202ENST00000399523 FAM126BQ8IXS8 530 aa21.84■■□□□ 1.09
UFD1-202ENST00000399523 TSPYL2Q9H2G4 693 aaPredicted RBP21.84■■□□□ 1.09
UFD1-202ENST00000399523 NKX2-4Q9H2Z4 354 aa21.84■■□□□ 1.09
UFD1-202ENST00000399523 SLC28A3Q9HAS3 691 aa21.84■■□□□ 1.09
UFD1-202ENST00000399523 IL23AQ9NPF7 189 aa21.84■■□□□ 1.09
UFD1-202ENST00000399523 PPP1R9AQ9ULJ8 1098 aa21.84■■□□□ 1.09
UFD1-202ENST00000399523 A0A0U1RQG5 324 aaPredicted RBP21.83■■□□□ 1.09
UFD1-202ENST00000399523 ASGR1P07306 291 aa21.83■■□□□ 1.09
UFD1-202ENST00000399523 CYP2D6P10635 497 aa21.83■■□□□ 1.09
UFD1-202ENST00000399523 DYNLL2Q96FJ2 89 aa21.83■■□□□ 1.09
UFD1-202ENST00000399523 CCDC17Q96LX7 622 aa21.83■■□□□ 1.09
UFD1-202ENST00000399523 PPP1R12CQ9BZL4 782 aa21.83■■□□□ 1.09
UFD1-202ENST00000399523 YBX2Q9Y2T7 364 aaKnown RBP21.83■■□□□ 1.09
UFD1-202ENST00000399523 PRRC2BQ5JSZ5 2229 aaKnown RBP21.83■■□□□ 1.08
UFD1-202ENST00000399523 DNAJC25-GNG10A0A024R161 153 aa21.82■■□□□ 1.08
UFD1-202ENST00000399523 PDE6AP16499 860 aa21.82■■□□□ 1.08
UFD1-202ENST00000399523 IRX5P78411 483 aaPredicted RBP21.82■■□□□ 1.08
UFD1-202ENST00000399523 SDR42E1Q8WUS8 393 aa21.82■■□□□ 1.08
UFD1-202ENST00000399523 UPF3AQ9H1J1 476 aaKnown RBP21.82■■□□□ 1.08
UFD1-202ENST00000399523 MTIF3Q9H2K0 278 aaKnown RBP21.82■■□□□ 1.08
UFD1-202ENST00000399523 TLR3O15455 904 aaKnown RBP21.81■■□□□ 1.08
UFD1-202ENST00000399523 CD4P01730 458 aa21.81■■□□□ 1.08
UFD1-202ENST00000399523 C6orf222P0C671 652 aaPredicted RBP21.81■■□□□ 1.08
UFD1-202ENST00000399523 SLC9C2Q5TAH2 1124 aa21.81■■□□□ 1.08
UFD1-202ENST00000399523 ZNF467Q7Z7K2 595 aaPredicted RBP21.81■■□□□ 1.08
UFD1-202ENST00000399523 CLUAP1Q96AJ1 413 aa21.81■■□□□ 1.08
UFD1-202ENST00000399523 VTI1AQ96AJ9 217 aa21.81■■□□□ 1.08
UFD1-202ENST00000399523 ZHX1Q9UKY1 873 aaPredicted RBP21.81■■□□□ 1.08
UFD1-202ENST00000399523 MCM3APO60318 1980 aa21.8■■□□□ 1.08
UFD1-202ENST00000399523 ADCY6O43306 1168 aa21.8■■□□□ 1.08
UFD1-202ENST00000399523 FGBP02675 491 aa21.8■■□□□ 1.08
UFD1-202ENST00000399523 EEF2P13639 858 aaKnown RBP21.8■■□□□ 1.08
UFD1-202ENST00000399523 CYP2C18P33260 490 aa21.8■■□□□ 1.08
UFD1-202ENST00000399523 GJA9P57773 515 aa21.8■■□□□ 1.08
UFD1-202ENST00000399523 TTF1Q15361 905 aaPredicted RBP21.8■■□□□ 1.08
UFD1-202ENST00000399523 AAK1Q2M2I8 961 aa21.8■■□□□ 1.08
UFD1-202ENST00000399523 SPC25Q9HBM1 224 aa21.8■■□□□ 1.08
UFD1-202ENST00000399523 APBB1O00213 710 aa21.79■■□□□ 1.08
UFD1-202ENST00000399523 NKX3-2P78367 333 aa21.79■■□□□ 1.08
UFD1-202ENST00000399523 TFF2Q03403 129 aa21.79■■□□□ 1.08
UFD1-202ENST00000399523 ACVR2BQ13705 512 aa21.79■■□□□ 1.08
UFD1-202ENST00000399523 GNASQ5JWF2 1037 aa21.79■■□□□ 1.08
UFD1-202ENST00000399523 DDX11Q96FC9 970 aa21.79■■□□□ 1.08
UFD1-202ENST00000399523 TEX13BQ9BXU2 312 aa21.79■■□□□ 1.08
UFD1-202ENST00000399523 KANSL2Q9H9L4 492 aa21.79■■□□□ 1.08
UFD1-202ENST00000399523 MUC6Q6W4X9 2439 aa21.78■■□□□ 1.08
UFD1-202ENST00000399523 TCRBV5S4A2TA0A5A2 114 aa21.78■■□□□ 1.08
UFD1-202ENST00000399523 CDK8P49336 464 aa21.78■■□□□ 1.08
UFD1-202ENST00000399523 CCDC144BQ3MJ40 725 aa21.78■■□□□ 1.08
UFD1-202ENST00000399523 LCORLQ8N3X6 602 aa21.78■■□□□ 1.08
UFD1-202ENST00000399523 TMEM57Q8N5G2 664 aa21.78■■□□□ 1.08
UFD1-202ENST00000399523 FRAT1Q92837 279 aaPredicted RBP21.78■■□□□ 1.08
UFD1-202ENST00000399523 ABHD16BQ9H3Z7 469 aa21.78■■□□□ 1.08
UFD1-202ENST00000399523 GOPCQ9HD26 462 aa21.78■■□□□ 1.08
UFD1-202ENST00000399523 ZNF532Q9HCE3 1301 aa21.78■■□□□ 1.08
UFD1-202ENST00000399523 BAZ2AQ9UIF9 1905 aaKnown RBP21.77■■□□□ 1.08
UFD1-202ENST00000399523 ERC2O15083 957 aa21.77■■□□□ 1.08
UFD1-202ENST00000399523 CTAGE5O15320 804 aa21.77■■□□□ 1.08
UFD1-202ENST00000399523 FAM83BQ5T0W9 1011 aa21.77■■□□□ 1.08
UFD1-202ENST00000399523 SLC43A3Q8NBI5 491 aa21.77■■□□□ 1.08
UFD1-202ENST00000399523 LRFN3Q9BTN0 628 aa21.77■■□□□ 1.08
UFD1-202ENST00000399523 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.77■■□□□ 1.08
UFD1-202ENST00000399523 RIPK3Q9Y572 518 aa21.77■■□□□ 1.08
UFD1-202ENST00000399523 KCNQ1P51787 676 aa21.76■■□□□ 1.07
UFD1-202ENST00000399523 C12orf60Q5U649 245 aa21.76■■□□□ 1.07
UFD1-202ENST00000399523 SNRNP48Q6IEG0 339 aaKnown RBP21.76■■□□□ 1.07
UFD1-202ENST00000399523 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.76■■□□□ 1.07
UFD1-202ENST00000399523 OTOP2Q7RTS6 562 aa21.76■■□□□ 1.07
UFD1-202ENST00000399523 AACSQ86V21 672 aa21.76■■□□□ 1.07
UFD1-202ENST00000399523 FGD4Q96M96 766 aa21.76■■□□□ 1.07
UFD1-202ENST00000399523 HIPK3Q9H422 1215 aa21.76■■□□□ 1.07
UFD1-202ENST00000399523 C1orf115Q9H7X2 142 aa21.76■■□□□ 1.07
UFD1-202ENST00000399523 ATP8A2Q9NTI2 1148 aa21.76■■□□□ 1.07
UFD1-202ENST00000399523 HCN4Q9Y3Q4 1203 aa21.76■■□□□ 1.07
UFD1-202ENST00000399523 SMIM22K7EJ46 135 aa21.75■■□□□ 1.07
UFD1-202ENST00000399523 POU3F3P20264 500 aaPredicted RBP21.75■■□□□ 1.07
UFD1-202ENST00000399523 RABGGTBP53611 331 aa21.75■■□□□ 1.07
UFD1-202ENST00000399523 PPP2R2DQ66LE6 453 aa21.75■■□□□ 1.07
UFD1-202ENST00000399523 C16orf86Q6ZW13 317 aa21.75■■□□□ 1.07
UFD1-202ENST00000399523 SLF1Q9BQI6 1058 aa21.75■■□□□ 1.07
UFD1-202ENST00000399523 EPHX3Q9H6B9 360 aa21.75■■□□□ 1.07
UFD1-202ENST00000399523 PCDHA11Q9Y5I1 949 aa21.75■■□□□ 1.07
UFD1-202ENST00000399523 ATP2A1O14983 1001 aa21.74■■□□□ 1.07
UFD1-202ENST00000399523 MICALL1Q8N3F8 863 aa21.74■■□□□ 1.07
UFD1-202ENST00000399523 ARMT1Q9H993 441 aa21.74■■□□□ 1.07
UFD1-202ENST00000399523 UMODL1Q5DID0 1318 aa21.74■■□□□ 1.07
UFD1-202ENST00000399523 PRKAB2O43741 272 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms