RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 FRMPD3Q5JV73 1810 aa11.86□□□□□ -0.51
NIFKP1-201ENST00000398317 LAMA2P24043 3122 aaKnown RBP11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 A0A1W2PRG0 241 aa11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 SOX1O00570 391 aaPredicted RBP11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 PRKAB2O43741 272 aa11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 CHGBP05060 677 aa11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 SYN1P17600 705 aa11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 CCNA1P78396 465 aa11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 MAP2K5Q13163 448 aa11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 DYNLL2Q96FJ2 89 aa11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 APBA2Q99767 749 aa11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 FLRT1Q9NZU1 646 aa11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 RLFQ13129 1914 aa11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 ZNFX1Q9P2E3 1918 aaKnown RBP11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 PFASO15067 1338 aa11.85□□□□□ -0.51
NIFKP1-201ENST00000398317 SMIM22K7EJ46 135 aa11.84□□□□□ -0.51
NIFKP1-201ENST00000398317 RAB11FIP3O75154 756 aa11.84□□□□□ -0.51
NIFKP1-201ENST00000398317 MBD4O95243 580 aa11.84□□□□□ -0.51
NIFKP1-201ENST00000398317 OATP04181 439 aa11.84□□□□□ -0.51
NIFKP1-201ENST00000398317 KIAA1755Q5JYT7 1200 aa11.84□□□□□ -0.51
NIFKP1-201ENST00000398317 NPLOC4Q8TAT6 608 aa11.84□□□□□ -0.51
NIFKP1-201ENST00000398317 TMEM134Q9H6X4 195 aa11.84□□□□□ -0.51
NIFKP1-201ENST00000398317 PAG1Q9NWQ8 432 aa11.84□□□□□ -0.51
NIFKP1-201ENST00000398317 CYP2D7A0A087X1C5 515 aa11.83□□□□□ -0.52
NIFKP1-201ENST00000398317 SLC15A5A6NIM6 579 aa11.83□□□□□ -0.52
NIFKP1-201ENST00000398317 GLRX3O76003 335 aaKnown RBP11.83□□□□□ -0.52
NIFKP1-201ENST00000398317 AKR1B1P15121 316 aa11.83□□□□□ -0.52
NIFKP1-201ENST00000398317 ADD2P35612 726 aa11.83□□□□□ -0.52
NIFKP1-201ENST00000398317 LBX2Q6XYB7 198 aa11.83□□□□□ -0.52
NIFKP1-201ENST00000398317 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
NIFKP1-201ENST00000398317 GDF15Q99988 308 aa11.83□□□□□ -0.52
NIFKP1-201ENST00000398317 TANGO6Q9C0B7 1094 aa11.83□□□□□ -0.52
NIFKP1-201ENST00000398317 IVNS1ABPQ9Y6Y0 642 aa11.83□□□□□ -0.52
NIFKP1-201ENST00000398317 SMCHD1A6NHR9 2005 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 A0A0C4DFX4 3053 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 COL11A1P12107 1806 aaPredicted RBP11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 SMARCA5O60264 1052 aaPredicted RBP11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 COL6A1P12109 1028 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 ATP5JP18859 108 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 CNGA1P29973 690 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 ATP2B2Q01814 1243 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 GRB14Q14449 540 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 COG2Q14746 738 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 C20orf194Q5TEA3 1177 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 MFSD14CQ5VZR4 134 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 TMEM179Q6ZVK1 233 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 HAUS7Q99871 368 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 MOV10L1Q9BXT6 1211 aaKnown RBP11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 PLA2G2EQ9NZK7 142 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
NIFKP1-201ENST00000398317 PARP14Q460N5 1801 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 A0A1W2PPC1 479 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 CYP2C19P33261 490 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 MAGEA10P43363 369 aaPredicted RBP11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 CDK8P49336 464 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 LRRC26Q2I0M4 334 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 SIAH1Q8IUQ4 282 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 SPICE1Q8N0Z3 855 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 TRPV1Q8NER1 839 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 SPATC1LQ9H0A9 340 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 ATP8A2Q9NTI2 1148 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 HOXC10Q9NYD6 342 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 SWAP70Q9UH65 585 aa11.81□□□□□ -0.52
NIFKP1-201ENST00000398317 USP17L12C9JPN9 530 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 USP17L21D6R901 530 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 HOXC6P09630 235 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 ERCC3P19447 782 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 ADORA2AP29274 412 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 BMP8BP34820 402 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 ICA1Q05084 483 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 PLS1Q14651 629 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 C12orf60Q5U649 245 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 DPP9Q86TI2 863 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 ARHGEF10LQ9HCE6 1279 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 DDX20Q9UHI6 824 aaKnown RBP11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 SLC4A4Q9Y6R1 1079 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 A0A0G2JMZ2 1700 aa11.8□□□□□ -0.52
NIFKP1-201ENST00000398317 COBLO75128 1261 aa11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 FLOT1O75955 427 aa11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 UBE3CQ15386 1083 aa11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 ANO1Q5XXA6 986 aa11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 NCAPG2Q86XI2 1143 aa11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 ATG4CQ96DT6 458 aa11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 LRRCC1Q9C099 1032 aa11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 SENP6Q9GZR1 1112 aaPredicted RBP11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 PUS7LQ9H0K6 701 aaKnown RBP11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 VCPKMTQ9H867 229 aa11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 TMX2Q9Y320 296 aa11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 ZNF236Q9UL36 1845 aa11.79□□□□□ -0.52
NIFKP1-201ENST00000398317 STRNO43815 780 aa11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 IGHA2P01877 340 aa11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 CYBAP13498 195 aa11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 EEF2P13639 858 aaKnown RBP11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 MDM2Q00987 491 aaPredicted RBP11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 PRAMEF19Q5SWL8 479 aa11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 CTR9Q6PD62 1173 aa11.78□□□□□ -0.52
NIFKP1-201ENST00000398317 C16orf86Q6ZW13 317 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms