RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 HOXC10Q9NYD6 342 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 SERPINB13Q9UIV8 391 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 UMODL1Q5DID0 1318 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 USP34Q70CQ2 3546 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 COL11A1P12107 1806 aaPredicted RBP11.49□□□□□ -0.57
NEDD9-203ENST00000397378 NAV1Q8NEY1 1877 aa11.49□□□□□ -0.57
NEDD9-203ENST00000397378 PNMA6EA0A0J9YXQ4 647 aa11.48□□□□□ -0.57
NEDD9-203ENST00000397378 DCXO43602 365 aa11.48□□□□□ -0.57
NEDD9-203ENST00000397378 GNAI2P04899 355 aa11.48□□□□□ -0.57
NEDD9-203ENST00000397378 C6orf222P0C671 652 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-203ENST00000397378 DYNLL1P63167 89 aaKnown RBP11.48□□□□□ -0.57
NEDD9-203ENST00000397378 CERKLQ49MI3 558 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-203ENST00000397378 CCSAPQ6IQ19 270 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-203ENST00000397378 PCSK9Q8NBP7 692 aaKnown RBP11.48□□□□□ -0.57
NEDD9-203ENST00000397378 ANKS1AQ92625 1134 aa11.48□□□□□ -0.57
NEDD9-203ENST00000397378 FAM184BQ9ULE4 1060 aa11.48□□□□□ -0.57
NEDD9-203ENST00000397378 CD4P01730 458 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 IL9P15248 144 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 RARSP54136 660 aaKnown RBP11.47□□□□□ -0.57
NEDD9-203ENST00000397378 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
NEDD9-203ENST00000397378 GRB10Q13322 594 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 ABCB5Q2M3G0 1257 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 TNNI3KQ59H18 835 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 HFE2Q6ZVN8 426 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 TTC6Q86TZ1 520 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 RPUSD2Q8IZ73 545 aaKnown RBP11.47□□□□□ -0.57
NEDD9-203ENST00000397378 MB21D1Q8N884 522 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 DBNDD2Q9BQY9 259 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 UBE2ZQ9H832 354 aaPredicted RBP11.47□□□□□ -0.57
NEDD9-203ENST00000397378 SPC25Q9HBM1 224 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 CABP5Q9NP86 173 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 ZHX1Q9UKY1 873 aaPredicted RBP11.47□□□□□ -0.57
NEDD9-203ENST00000397378 FPGT-TNNI3KV9GXZ4 949 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 CFAP54Q96N23 3096 aa11.47□□□□□ -0.57
NEDD9-203ENST00000397378 ZNF536O15090 1300 aa11.46□□□□□ -0.57
NEDD9-203ENST00000397378 KCNA5P22460 613 aa11.46□□□□□ -0.57
NEDD9-203ENST00000397378 CYP7A1P22680 504 aa11.46□□□□□ -0.57
NEDD9-203ENST00000397378 CST5P28325 142 aaPredicted RBP11.46□□□□□ -0.57
NEDD9-203ENST00000397378 ZAP70P43403 619 aa11.46□□□□□ -0.57
NEDD9-203ENST00000397378 USP5P45974 858 aa11.46□□□□□ -0.57
NEDD9-203ENST00000397378 TAP1Q03518 808 aa11.46□□□□□ -0.57
NEDD9-203ENST00000397378 KCTD2Q14681 263 aa11.46□□□□□ -0.57
NEDD9-203ENST00000397378 TMED8Q6PL24 325 aaPredicted RBP11.46□□□□□ -0.57
NEDD9-203ENST00000397378 MFSD14AQ96MC6 490 aa11.46□□□□□ -0.57
NEDD9-203ENST00000397378 PIH1D3Q9NQM4 214 aaKnown RBP11.46□□□□□ -0.57
NEDD9-203ENST00000397378 DUSP11O75319 330 aaKnown RBP11.45□□□□□ -0.58
NEDD9-203ENST00000397378 GUCY1A2P33402 732 aa11.45□□□□□ -0.58
NEDD9-203ENST00000397378 SHMT1P34896 483 aa11.45□□□□□ -0.58
NEDD9-203ENST00000397378 ZNF792Q3KQV3 632 aa11.45□□□□□ -0.58
NEDD9-203ENST00000397378 LEXMQ3ZCV2 418 aa11.45□□□□□ -0.58
NEDD9-203ENST00000397378 GNASQ5JWF2 1037 aa11.45□□□□□ -0.58
NEDD9-203ENST00000397378 PTCRAQ6ISU1 281 aaPredicted RBP11.45□□□□□ -0.58
NEDD9-203ENST00000397378 ATG4CQ96DT6 458 aa11.45□□□□□ -0.58
NEDD9-203ENST00000397378 SCLYQ96I15 445 aa11.45□□□□□ -0.58
NEDD9-203ENST00000397378 WNT8AQ9H1J5 351 aa11.45□□□□□ -0.58
NEDD9-203ENST00000397378 DIS3Q9Y2L1 958 aaKnown RBP11.45□□□□□ -0.58
NEDD9-203ENST00000397378 ZNF318Q5VUA4 2279 aa11.45□□□□□ -0.58
NEDD9-203ENST00000397378 GFRA3O60609 400 aa11.44□□□□□ -0.58
NEDD9-203ENST00000397378 FLOT1O75955 427 aa11.44□□□□□ -0.58
NEDD9-203ENST00000397378 ARHGEF15O94989 841 aa11.44□□□□□ -0.58
NEDD9-203ENST00000397378 SLC25A27O95847 323 aa11.44□□□□□ -0.58
NEDD9-203ENST00000397378 DSG3P32926 999 aa11.44□□□□□ -0.58
NEDD9-203ENST00000397378 PTPN5P54829 565 aa11.44□□□□□ -0.58
NEDD9-203ENST00000397378 GABPAQ06546 454 aa11.44□□□□□ -0.58
NEDD9-203ENST00000397378 POLA2Q14181 598 aa11.44□□□□□ -0.58
NEDD9-203ENST00000397378 TTLL4Q14679 1199 aa11.44□□□□□ -0.58
NEDD9-203ENST00000397378 MIGA1Q8NAN2 632 aa11.44□□□□□ -0.58
NEDD9-203ENST00000397378 PRSS33Q8NF86 280 aa11.44□□□□□ -0.58
NEDD9-203ENST00000397378 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.44□□□□□ -0.58
NEDD9-203ENST00000397378 A0A1W2PRG0 241 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 POTEB3A0JP26 581 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 KIF28PB7ZC32 967 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 IPO8O15397 1037 aaKnown RBP11.43□□□□□ -0.58
NEDD9-203ENST00000397378 LPXNO60711 386 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 IDH1O75874 414 aaKnown RBP11.43□□□□□ -0.58
NEDD9-203ENST00000397378 TRIM27P14373 513 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 PLCD1P51178 756 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 SEPT2Q15019 361 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 POTEBQ6S5H4 581 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 DEFB128Q7Z7B8 93 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 MAGEB6Q8N7X4 407 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 SSH3Q8TE77 659 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 GDPD5Q8WTR4 605 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 SLC9A7Q96T83 725 aa11.43□□□□□ -0.58
NEDD9-203ENST00000397378 NOC4LQ9BVI4 516 aaKnown RBP11.43□□□□□ -0.58
NEDD9-203ENST00000397378 DBNLQ9UJU6 430 aaKnown RBP11.43□□□□□ -0.58
NEDD9-203ENST00000397378 BAZ2AQ9UIF9 1905 aaKnown RBP11.43□□□□□ -0.58
NEDD9-203ENST00000397378 BRWD1Q9NSI6 2320 aa11.42□□□□□ -0.58
NEDD9-203ENST00000397378 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-203ENST00000397378 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-203ENST00000397378 GRXCR2A6NFK2 248 aa11.42□□□□□ -0.58
NEDD9-203ENST00000397378 MPHOSPH10O00566 681 aaKnown RBP11.42□□□□□ -0.58
NEDD9-203ENST00000397378 PFKMP08237 780 aa11.42□□□□□ -0.58
NEDD9-203ENST00000397378 ACTN1P12814 892 aa11.42□□□□□ -0.58
NEDD9-203ENST00000397378 GJA9P57773 515 aa11.42□□□□□ -0.58
NEDD9-203ENST00000397378 OS9Q13438 667 aaPredicted RBP11.42□□□□□ -0.58
NEDD9-203ENST00000397378 TMEM132BQ14DG7 1078 aa11.42□□□□□ -0.58
NEDD9-203ENST00000397378 SPRED2Q7Z698 418 aa11.42□□□□□ -0.58
NEDD9-203ENST00000397378 RIOK1Q9BRS2 568 aaKnown RBP11.42□□□□□ -0.58
NEDD9-203ENST00000397378 NOP58Q9Y2X3 529 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms