RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 MAGEA1P43355 309 aa17.28■□□□□ 0.36
GNE-202ENST00000396594 YARSP54577 528 aaKnown RBP17.28■□□□□ 0.36
GNE-202ENST00000396594 CTDSPL2Q05D32 466 aa17.28■□□□□ 0.36
GNE-202ENST00000396594 ABCB5Q2M3G0 1257 aa17.28■□□□□ 0.36
GNE-202ENST00000396594 PPP1R18Q6NYC8 613 aa17.28■□□□□ 0.36
GNE-202ENST00000396594 TTLL7Q6ZT98 887 aa17.28■□□□□ 0.36
GNE-202ENST00000396594 FOXP4Q8IVH2 680 aaPredicted RBP17.28■□□□□ 0.36
GNE-202ENST00000396594 NCAPGQ9BPX3 1015 aa17.28■□□□□ 0.36
GNE-202ENST00000396594 BIN2Q9UBW5 565 aaPredicted RBP17.28■□□□□ 0.36
GNE-202ENST00000396594 TTLL1O95922 423 aa17.27■□□□□ 0.36
GNE-202ENST00000396594 PPM1FP49593 454 aaPredicted RBP17.27■□□□□ 0.36
GNE-202ENST00000396594 GBP6Q6ZN66 633 aa17.27■□□□□ 0.36
GNE-202ENST00000396594 CCDC114Q96M63 670 aa17.27■□□□□ 0.36
GNE-202ENST00000396594 PLCD4Q9BRC7 762 aa17.27■□□□□ 0.36
GNE-202ENST00000396594 GCNT3O95395 438 aa17.27■□□□□ 0.36
GNE-202ENST00000396594 STAT1P42224 750 aa17.27■□□□□ 0.36
GNE-202ENST00000396594 CFAP157Q5JU67 520 aa17.27■□□□□ 0.36
GNE-202ENST00000396594 SMCR8Q8TEV9 937 aaPredicted RBP17.27■□□□□ 0.36
GNE-202ENST00000396594 DHTKD1Q96HY7 919 aaPredicted RBP17.27■□□□□ 0.36
GNE-202ENST00000396594 ZBTB21Q9ULJ3 1066 aa17.27■□□□□ 0.36
GNE-202ENST00000396594 TAF5LO75529 589 aa17.27■□□□□ 0.36
GNE-202ENST00000396594 FMNL1O95466 1100 aaPredicted RBP17.27■□□□□ 0.36
GNE-202ENST00000396594 ZBTB16Q05516 673 aa17.27■□□□□ 0.36
GNE-202ENST00000396594 SPATA31A3Q5VYP0 1347 aa17.27■□□□□ 0.36
GNE-202ENST00000396594 SLC27A3Q5K4L6 730 aa17.27■□□□□ 0.35
GNE-202ENST00000396594 MSL1Q68DK7 614 aa17.27■□□□□ 0.35
GNE-202ENST00000396594 CFAP57Q96MR6 1250 aa17.27■□□□□ 0.35
GNE-202ENST00000396594 LMNB2Q03252 620 aa17.27■□□□□ 0.35
GNE-202ENST00000396594 CUL4BQ13620 913 aa17.27■□□□□ 0.35
GNE-202ENST00000396594 SLFN13Q68D06 897 aa17.27■□□□□ 0.35
GNE-202ENST00000396594 MRFAP1L1Q96HT8 127 aa17.27■□□□□ 0.35
GNE-202ENST00000396594 TYW1Q9NV66 732 aaKnown RBP17.27■□□□□ 0.35
GNE-202ENST00000396594 OGFRQ9NZT2 677 aa17.27■□□□□ 0.35
GNE-202ENST00000396594 RXRBP28702 533 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 NSMFQ6X4W1 530 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 PCDHA12Q9UN75 941 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 NFE2L3Q9Y4A8 694 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 RPS6KA1Q15418 735 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 CCDC63Q8NA47 563 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 CFBP00751 764 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 C10orf76Q5T2E6 689 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 RGS22Q8NE09 1264 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 CCT6BQ92526 530 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 KIAA1468Q9P260 1216 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 MKRN1Q9UHC7 482 aaKnown RBP17.26■□□□□ 0.35
GNE-202ENST00000396594 GLI2P10070 1586 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 TMEM110-MUSTN1A8MSY1 372 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 SLC26A4O43511 780 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 DCUN1D2Q6PH85 259 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 MLXIPQ9HAP2 919 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 POLR3EQ9NVU0 708 aa17.26■□□□□ 0.35
GNE-202ENST00000396594 KLRF2D3W0D1 207 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 ZBTB24O43167 697 aaPredicted RBP17.25■□□□□ 0.35
GNE-202ENST00000396594 DAPK3O43293 454 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 ARMC9Q7Z3E5 817 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 TMEM206Q9H813 350 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 BSDC1Q9NW68 430 aaPredicted RBP17.25■□□□□ 0.35
GNE-202ENST00000396594 PCDHA4Q9UN74 947 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 TNNQ9UQP3 1299 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 SUGT1Q9Y2Z0 365 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 EEF1GP26641 437 aaKnown RBP17.25■□□□□ 0.35
GNE-202ENST00000396594 LIFRP42702 1097 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 MXRA7P84157 204 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 GRAPQ13588 217 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 OR8K1Q8NGG5 319 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 GRAPLQ8TC17 118 aaPredicted RBP17.25■□□□□ 0.35
GNE-202ENST00000396594 EAF2Q96CJ1 260 aaPredicted RBP17.25■□□□□ 0.35
GNE-202ENST00000396594 C1orf112Q9NSG2 853 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 ARID5AQ03989 594 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 ITIH3Q06033 890 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 DMP1Q13316 513 aaPredicted RBP17.25■□□□□ 0.35
GNE-202ENST00000396594 ELMSAN1Q6PJG2 1045 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 SND1Q7KZF4 910 aaKnown RBP eCLIP17.25■□□□□ 0.35
GNE-202ENST00000396594 BRIP1Q9BX63 1249 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 CTTNBP2NLQ9P2B4 639 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 CCDC6Q16204 474 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 AMFRQ9UKV5 643 aa17.25■□□□□ 0.35
GNE-202ENST00000396594 AGLP35573 1532 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 ZNF233A6NK53 670 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 SPATS2Q86XZ4 545 aaKnown RBP17.24■□□□□ 0.35
GNE-202ENST00000396594 RIOK1Q9BRS2 568 aaKnown RBP17.24■□□□□ 0.35
GNE-202ENST00000396594 HAUS4Q9H6D7 363 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 DDX25Q9UHL0 483 aaKnown RBP17.24■□□□□ 0.35
GNE-202ENST00000396594 FRMPD1Q5SYB0 1578 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 ATP8B3O60423 1300 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 SPATA1Q5VX52 437 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 GPBP1Q86WP2 473 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 RNF34Q969K3 372 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 CBX8Q9HC52 389 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 ARMCX3Q9UH62 379 aaPredicted RBP17.24■□□□□ 0.35
GNE-202ENST00000396594 DAAM1Q9Y4D1 1078 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 RXRAP19793 462 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 CA8P35219 290 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 PHBP35232 272 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 ADD2P35612 726 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 PPFIA1Q13136 1202 aa17.24■□□□□ 0.35
GNE-202ENST00000396594 CHMP2AO43633 222 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms