RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 DIS3Q9Y2L1 958 aaKnown RBP22.76■■□□□ 1.23
CDKN1B-202ENST00000396340 CHMLP26374 656 aa22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 IKQ13123 557 aaPredicted RBP22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 MAP3K21Q5TCX8 1036 aa22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 KIAA1211Q6ZU35 1233 aa22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 LRRC47Q8N1G4 583 aaKnown RBP22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 TRIB2Q92519 343 aa22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 CCDC136Q96JN2 1154 aa22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 HTATIP2Q9BUP3 242 aa22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 UNC93B1Q9H1C4 597 aa22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 IL17RBQ9NRM6 502 aa22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 ZNF214Q9UL59 606 aaPredicted RBP22.75■■□□□ 1.23
CDKN1B-202ENST00000396340 MYCP01106 439 aaPredicted RBP22.74■■□□□ 1.23
CDKN1B-202ENST00000396340 TFRCP02786 760 aaKnown RBP22.74■■□□□ 1.23
CDKN1B-202ENST00000396340 ADORA2AP29274 412 aa22.74■■□□□ 1.23
CDKN1B-202ENST00000396340 HAND2P61296 217 aa22.74■■□□□ 1.23
CDKN1B-202ENST00000396340 ERICH6BQ5W0A0 696 aa22.74■■□□□ 1.23
CDKN1B-202ENST00000396340 SAMD1Q6SPF0 538 aaPredicted RBP22.74■■□□□ 1.23
CDKN1B-202ENST00000396340 CHST13Q8NET6 341 aa22.74■■□□□ 1.23
CDKN1B-202ENST00000396340 SLC38A10Q9HBR0 1119 aa22.74■■□□□ 1.23
CDKN1B-202ENST00000396340 FBXO28Q9NVF7 368 aa22.74■■□□□ 1.23
CDKN1B-202ENST00000396340 NRBP1Q9UHY1 535 aa22.74■■□□□ 1.23
CDKN1B-202ENST00000396340 ISY1Q9ULR0 285 aaKnown RBP22.74■■□□□ 1.23
CDKN1B-202ENST00000396340 PLXNA1Q9UIW2 1896 aa22.73■■□□□ 1.23
CDKN1B-202ENST00000396340 TKFCQ3LXA3 575 aa22.73■■□□□ 1.23
CDKN1B-202ENST00000396340 BMP2KLQ5H9B9 411 aa22.73■■□□□ 1.23
CDKN1B-202ENST00000396340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.73■■□□□ 1.23
CDKN1B-202ENST00000396340 MSL3Q8N5Y2 521 aaKnown RBP22.73■■□□□ 1.23
CDKN1B-202ENST00000396340 KIFC2Q96AC6 838 aa22.73■■□□□ 1.23
CDKN1B-202ENST00000396340 MMP19Q99542 508 aa22.73■■□□□ 1.23
CDKN1B-202ENST00000396340 TMEM232C9JQI7 657 aa22.72■■□□□ 1.23
CDKN1B-202ENST00000396340 CENPBP07199 599 aaPredicted RBP22.72■■□□□ 1.23
CDKN1B-202ENST00000396340 PRKAR2AP13861 404 aaKnown RBP22.72■■□□□ 1.23
CDKN1B-202ENST00000396340 GPATCH4Q5T3I0 446 aaKnown RBP22.72■■□□□ 1.23
CDKN1B-202ENST00000396340 SNRNP48Q6IEG0 339 aaKnown RBP22.72■■□□□ 1.23
CDKN1B-202ENST00000396340 DEFB118Q96PH6 123 aa22.72■■□□□ 1.23
CDKN1B-202ENST00000396340 CRISPLD2Q9H0B8 497 aa22.72■■□□□ 1.23
CDKN1B-202ENST00000396340 SGSM2O43147 1006 aa22.71■■□□□ 1.23
CDKN1B-202ENST00000396340 MCCP23508 829 aa22.71■■□□□ 1.23
CDKN1B-202ENST00000396340 REPS2Q8NFH8 660 aa22.71■■□□□ 1.23
CDKN1B-202ENST00000396340 NUP88Q99567 741 aaPredicted RBP22.71■■□□□ 1.23
CDKN1B-202ENST00000396340 UBAC1Q9BSL1 405 aa22.71■■□□□ 1.23
CDKN1B-202ENST00000396340 TNRC18O15417 2968 aaPredicted RBP22.71■■□□□ 1.23
CDKN1B-202ENST00000396340 PEX10O60683 326 aa22.7■■□□□ 1.22
CDKN1B-202ENST00000396340 SART3Q15020 963 aaKnown RBP22.7■■□□□ 1.22
CDKN1B-202ENST00000396340 DDX11Q96FC9 970 aa22.7■■□□□ 1.22
CDKN1B-202ENST00000396340 TMEM47Q9BQJ4 181 aa22.7■■□□□ 1.22
CDKN1B-202ENST00000396340 CACNB2Q08289 660 aaPredicted RBP22.69■■□□□ 1.22
CDKN1B-202ENST00000396340 PRPF38BQ5VTL8 546 aaKnown RBP22.69■■□□□ 1.22
CDKN1B-202ENST00000396340 ANKS1AQ92625 1134 aa22.69■■□□□ 1.22
CDKN1B-202ENST00000396340 MAF1Q9H063 256 aa22.69■■□□□ 1.22
CDKN1B-202ENST00000396340 KAT14Q9H8E8 782 aa22.69■■□□□ 1.22
CDKN1B-202ENST00000396340 ERICH2A1L162 156 aa22.68■■□□□ 1.22
CDKN1B-202ENST00000396340 NMT2O60551 498 aa22.68■■□□□ 1.22
CDKN1B-202ENST00000396340 KDM4AO75164 1064 aa22.68■■□□□ 1.22
CDKN1B-202ENST00000396340 FARP2O94887 1054 aaPredicted RBP22.68■■□□□ 1.22
CDKN1B-202ENST00000396340 CCDC96Q2M329 555 aa22.68■■□□□ 1.22
CDKN1B-202ENST00000396340 BTNL9Q6UXG8 535 aa22.68■■□□□ 1.22
CDKN1B-202ENST00000396340 RALYLQ86SE5 291 aaKnown RBP22.68■■□□□ 1.22
CDKN1B-202ENST00000396340 TBC1D10CQ8IV04 446 aa22.68■■□□□ 1.22
CDKN1B-202ENST00000396340 ZSCAN10Q96SZ4 725 aaPredicted RBP22.68■■□□□ 1.22
CDKN1B-202ENST00000396340 INCENPQ9NQS7 918 aa22.68■■□□□ 1.22
CDKN1B-202ENST00000396340 PFASO15067 1338 aa22.67■■□□□ 1.22
CDKN1B-202ENST00000396340 NECAB2Q7Z6G3 386 aa22.67■■□□□ 1.22
CDKN1B-202ENST00000396340 ZNF467Q7Z7K2 595 aaPredicted RBP22.67■■□□□ 1.22
CDKN1B-202ENST00000396340 CPXCR1Q8N123 301 aa22.67■■□□□ 1.22
CDKN1B-202ENST00000396340 NBPF3Q9H094 633 aa22.67■■□□□ 1.22
CDKN1B-202ENST00000396340 OGDHLQ9ULD0 1010 aa22.67■■□□□ 1.22
CDKN1B-202ENST00000396340 ANKRD35Q8N283 1001 aa22.66■■□□□ 1.22
CDKN1B-202ENST00000396340 MAP4K1Q92918 833 aa22.66■■□□□ 1.22
CDKN1B-202ENST00000396340 SHISA4Q96DD7 197 aa22.66■■□□□ 1.22
CDKN1B-202ENST00000396340 MAML3Q96JK9 1138 aa22.66■■□□□ 1.22
CDKN1B-202ENST00000396340 MTA3Q9BTC8 594 aa22.66■■□□□ 1.22
CDKN1B-202ENST00000396340 ACAD9Q9H845 621 aa22.66■■□□□ 1.22
CDKN1B-202ENST00000396340 ZSWIM5Q9P217 1185 aa22.66■■□□□ 1.22
CDKN1B-202ENST00000396340 BRCA2P51587 3418 aa22.66■■□□□ 1.22
CDKN1B-202ENST00000396340 NEDD4P46934 1319 aa22.65■■□□□ 1.22
CDKN1B-202ENST00000396340 PDHBP11177 359 aa22.65■■□□□ 1.22
CDKN1B-202ENST00000396340 CCL14Q16627 93 aa22.65■■□□□ 1.22
CDKN1B-202ENST00000396340 ASPRV1Q53RT3 343 aa22.65■■□□□ 1.22
CDKN1B-202ENST00000396340 NCOA7Q8NI08 942 aa22.65■■□□□ 1.22
CDKN1B-202ENST00000396340 NPLOC4Q8TAT6 608 aa22.65■■□□□ 1.22
CDKN1B-202ENST00000396340 PRR12Q9ULL5 1215 aa22.65■■□□□ 1.22
CDKN1B-202ENST00000396340 CNPY2Q9Y2B0 182 aa22.65■■□□□ 1.22
CDKN1B-202ENST00000396340 NR2E3Q9Y5X4 410 aa22.65■■□□□ 1.22
CDKN1B-202ENST00000396340 SYNGAP1Q96PV0 1343 aa22.64■■□□□ 1.22
CDKN1B-202ENST00000396340 B4E1Z4 1266 aa22.64■■□□□ 1.21
CDKN1B-202ENST00000396340 SNHG28P0DPA3 235 aa22.64■■□□□ 1.21
CDKN1B-202ENST00000396340 TRAF1Q13077 416 aa22.64■■□□□ 1.21
CDKN1B-202ENST00000396340 RNF20Q5VTR2 975 aa22.64■■□□□ 1.21
CDKN1B-202ENST00000396340 KCTD1Q719H9 257 aa22.64■■□□□ 1.21
CDKN1B-202ENST00000396340 UBE2Q1Q7Z7E8 422 aa22.64■■□□□ 1.21
CDKN1B-202ENST00000396340 PNMA1Q8ND90 353 aa22.64■■□□□ 1.21
CDKN1B-202ENST00000396340 RAVER2Q9HCJ3 691 aaKnown RBP22.64■■□□□ 1.21
CDKN1B-202ENST00000396340 LOC102724159A0A0B4J2E5 919 aa22.63■■□□□ 1.21
CDKN1B-202ENST00000396340 SEPT4O43236 478 aa22.63■■□□□ 1.21
CDKN1B-202ENST00000396340 COBLO75128 1261 aa22.63■■□□□ 1.21
CDKN1B-202ENST00000396340 IGHA2P01877 340 aa22.63■■□□□ 1.21
CDKN1B-202ENST00000396340 ICAM1P05362 532 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms