RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 PRPF38AQ8NAV1 312 aaKnown RBP19.24■□□□□ 0.67
CXCL12-206ENST00000395795 FGD4Q96M96 766 aa19.24■□□□□ 0.67
CXCL12-206ENST00000395795 SLC38A10Q9HBR0 1119 aa19.24■□□□□ 0.67
CXCL12-206ENST00000395795 ORC4O43929 436 aa19.23■□□□□ 0.67
CXCL12-206ENST00000395795 TSPY3P0CV98 308 aa19.23■□□□□ 0.67
CXCL12-206ENST00000395795 TSPY8P0CW00 308 aa19.23■□□□□ 0.67
CXCL12-206ENST00000395795 TAL1P17542 331 aaPredicted RBP19.23■□□□□ 0.67
CXCL12-206ENST00000395795 MCMDC2Q4G0Z9 681 aa19.23■□□□□ 0.67
CXCL12-206ENST00000395795 SLFN13Q68D06 897 aa19.23■□□□□ 0.67
CXCL12-206ENST00000395795 B4GALNT3Q6L9W6 998 aa19.23■□□□□ 0.67
CXCL12-206ENST00000395795 MMP19Q99542 508 aa19.23■□□□□ 0.67
CXCL12-206ENST00000395795 TEX13BQ9BXU2 312 aa19.23■□□□□ 0.67
CXCL12-206ENST00000395795 RWDD1Q9H446 243 aaPredicted RBP19.23■□□□□ 0.67
CXCL12-206ENST00000395795 ZMYND8Q9ULU4 1186 aaPredicted RBP19.23■□□□□ 0.67
CXCL12-206ENST00000395795 SEPT4O43236 478 aa19.22■□□□□ 0.67
CXCL12-206ENST00000395795 MSCO60682 206 aa19.22■□□□□ 0.67
CXCL12-206ENST00000395795 HSPD1P10809 573 aaKnown RBP19.22■□□□□ 0.67
CXCL12-206ENST00000395795 ANO1Q5XXA6 986 aa19.22■□□□□ 0.67
CXCL12-206ENST00000395795 FEM1BQ9UK73 627 aa19.22■□□□□ 0.67
CXCL12-206ENST00000395795 DIS3Q9Y2L1 958 aaKnown RBP19.22■□□□□ 0.67
CXCL12-206ENST00000395795 SZT2Q5T011 3432 aa19.22■□□□□ 0.67
CXCL12-206ENST00000395795 ZNF536O15090 1300 aa19.22■□□□□ 0.67
CXCL12-206ENST00000395795 ZMYM6O95789 1325 aa19.22■□□□□ 0.67
CXCL12-206ENST00000395795 SMCHD1A6NHR9 2005 aa19.21■□□□□ 0.67
CXCL12-206ENST00000395795 ZNF865P0CJ78 1059 aaPredicted RBP19.21■□□□□ 0.67
CXCL12-206ENST00000395795 BMP3P12645 472 aa19.21■□□□□ 0.67
CXCL12-206ENST00000395795 SYN1P17600 705 aa19.21■□□□□ 0.67
CXCL12-206ENST00000395795 CNGA1P29973 690 aa19.21■□□□□ 0.67
CXCL12-206ENST00000395795 SNRNP48Q6IEG0 339 aaKnown RBP19.21■□□□□ 0.67
CXCL12-206ENST00000395795 KIFC2Q96AC6 838 aa19.21■□□□□ 0.67
CXCL12-206ENST00000395795 GMCL1Q96IK5 515 aa19.21■□□□□ 0.67
CXCL12-206ENST00000395795 RAVER2Q9HCJ3 691 aaKnown RBP19.21■□□□□ 0.67
CXCL12-206ENST00000395795 PLXNA1Q9UIW2 1896 aa19.21■□□□□ 0.67
CXCL12-206ENST00000395795 LAMA3Q16787 3333 aa19.21■□□□□ 0.67
CXCL12-206ENST00000395795 DNM1LO00429 736 aa19.2■□□□□ 0.66
CXCL12-206ENST00000395795 SOX1O00570 391 aaPredicted RBP19.2■□□□□ 0.66
CXCL12-206ENST00000395795 SLC3A2P08195 630 aaKnown RBP19.2■□□□□ 0.66
CXCL12-206ENST00000395795 COPB2P35606 906 aa19.2■□□□□ 0.66
CXCL12-206ENST00000395795 GJC2Q5T442 439 aaPredicted RBP19.2■□□□□ 0.66
CXCL12-206ENST00000395795 TINF2Q9BSI4 451 aa19.2■□□□□ 0.66
CXCL12-206ENST00000395795 SLC5A4Q9NY91 659 aa19.2■□□□□ 0.66
CXCL12-206ENST00000395795 ZBTB47Q9UFB7 747 aaPredicted RBP19.2■□□□□ 0.66
CXCL12-206ENST00000395795 NRBP1Q9UHY1 535 aa19.2■□□□□ 0.66
CXCL12-206ENST00000395795 SNAI1O95863 264 aaPredicted RBP19.19■□□□□ 0.66
CXCL12-206ENST00000395795 SDSP20132 328 aa19.19■□□□□ 0.66
CXCL12-206ENST00000395795 BMP8BP34820 402 aa19.19■□□□□ 0.66
CXCL12-206ENST00000395795 KCTD2Q14681 263 aa19.19■□□□□ 0.66
CXCL12-206ENST00000395795 CPXCR1Q8N123 301 aa19.19■□□□□ 0.66
CXCL12-206ENST00000395795 SUPT16HQ9Y5B9 1047 aaKnown RBP19.19■□□□□ 0.66
CXCL12-206ENST00000395795 CCDC171Q6TFL3 1326 aa19.19■□□□□ 0.66
CXCL12-206ENST00000395795 A0A1W2PPC1 479 aa19.18■□□□□ 0.66
CXCL12-206ENST00000395795 TMEM232C9JQI7 657 aa19.18■□□□□ 0.66
CXCL12-206ENST00000395795 PLA2G6O60733 806 aa19.18■□□□□ 0.66
CXCL12-206ENST00000395795 MCCP23508 829 aa19.18■□□□□ 0.66
CXCL12-206ENST00000395795 PDE4AP27815 886 aa19.18■□□□□ 0.66
CXCL12-206ENST00000395795 MAGEA10P43363 369 aaPredicted RBP19.18■□□□□ 0.66
CXCL12-206ENST00000395795 RCSD1Q6JBY9 416 aa19.18■□□□□ 0.66
CXCL12-206ENST00000395795 MAMDC4Q6UXC1 1216 aa19.18■□□□□ 0.66
CXCL12-206ENST00000395795 TBC1D10CQ8IV04 446 aa19.18■□□□□ 0.66
CXCL12-206ENST00000395795 SENP6Q9GZR1 1112 aaPredicted RBP19.18■□□□□ 0.66
CXCL12-206ENST00000395795 TSPY2A6NKD2 308 aa19.17■□□□□ 0.66
CXCL12-206ENST00000395795 ZBED4O75132 1171 aa19.17■□□□□ 0.66
CXCL12-206ENST00000395795 OAZ1P54368 228 aa19.17■□□□□ 0.66
CXCL12-206ENST00000395795 LRRC41Q15345 812 aa19.17■□□□□ 0.66
CXCL12-206ENST00000395795 KCTD1Q719H9 257 aa19.17■□□□□ 0.66
CXCL12-206ENST00000395795 STAG1Q8WVM7 1258 aa19.17■□□□□ 0.66
CXCL12-206ENST00000395795 CHMP4CQ96CF2 233 aa19.17■□□□□ 0.66
CXCL12-206ENST00000395795 IL25Q9H293 177 aa19.17■□□□□ 0.66
CXCL12-206ENST00000395795 TRIM6-TRIM34B2RNG4 842 aa19.16■□□□□ 0.66
CXCL12-206ENST00000395795 RANBP6O60518 1105 aaKnown RBP19.16■□□□□ 0.66
CXCL12-206ENST00000395795 HAND2P61296 217 aa19.16■□□□□ 0.66
CXCL12-206ENST00000395795 SNX17Q15036 470 aa19.16■□□□□ 0.66
CXCL12-206ENST00000395795 RILPL2Q969X0 211 aa19.16■□□□□ 0.66
CXCL12-206ENST00000395795 LENG1Q96BZ8 264 aaPredicted RBP19.16■□□□□ 0.66
CXCL12-206ENST00000395795 AGBL1Q96MI9 1066 aa19.16■□□□□ 0.66
CXCL12-206ENST00000395795 TCP11L1Q9NUJ3 509 aa19.16■□□□□ 0.66
CXCL12-206ENST00000395795 STX8Q9UNK0 236 aa19.16■□□□□ 0.66
CXCL12-206ENST00000395795 ADCY6O43306 1168 aa19.15■□□□□ 0.66
CXCL12-206ENST00000395795 SLC1A4P43007 532 aa19.15■□□□□ 0.66
CXCL12-206ENST00000395795 STAT2P52630 851 aa19.15■□□□□ 0.66
CXCL12-206ENST00000395795 ATN1P54259 1190 aaPredicted RBP19.15■□□□□ 0.66
CXCL12-206ENST00000395795 SNAP25P60880 206 aa19.15■□□□□ 0.66
CXCL12-206ENST00000395795 TTBK2Q6IQ55 1244 aa19.15■□□□□ 0.66
CXCL12-206ENST00000395795 ZNF467Q7Z7K2 595 aaPredicted RBP19.15■□□□□ 0.66
CXCL12-206ENST00000395795 MSL3Q8N5Y2 521 aaKnown RBP19.15■□□□□ 0.66
CXCL12-206ENST00000395795 ARRDC4Q8NCT1 418 aa19.15■□□□□ 0.66
CXCL12-206ENST00000395795 CHST13Q8NET6 341 aa19.15■□□□□ 0.66
CXCL12-206ENST00000395795 KATNBL1Q9H079 304 aa19.15■□□□□ 0.66
CXCL12-206ENST00000395795 ASTN1O14525 1302 aa19.15■□□□□ 0.66
CXCL12-206ENST00000395795 ADAMTS4O75173 837 aa19.14■□□□□ 0.65
CXCL12-206ENST00000395795 BTNL9Q6UXG8 535 aa19.14■□□□□ 0.65
CXCL12-206ENST00000395795 SLC39A5Q6ZMH5 540 aa19.14■□□□□ 0.65
CXCL12-206ENST00000395795 FAM160B2Q86V87 743 aa19.14■□□□□ 0.65
CXCL12-206ENST00000395795 FAM133AQ8N9E0 248 aa19.14■□□□□ 0.65
CXCL12-206ENST00000395795 TMEM47Q9BQJ4 181 aa19.14■□□□□ 0.65
CXCL12-206ENST00000395795 PRR12Q9ULL5 1215 aa19.14■□□□□ 0.65
CXCL12-206ENST00000395795 SYNGAP1Q96PV0 1343 aa19.14■□□□□ 0.65
CXCL12-206ENST00000395795 FDX1P10109 184 aa19.13■□□□□ 0.65
CXCL12-206ENST00000395795 RTP1P59025 263 aa19.13■□□□□ 0.65
CXCL12-206ENST00000395795 IRX5P78411 483 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms